Xiphophorus maculatus (southern platyfish): 102233512
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Entry
102233512 CDS
T02923
Name
(RefSeq) elongation factor 1-alpha 1
KO
K03231
elongation factor 1-alpha
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102233512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xma03019
]
102233512
03016 Transfer RNA biogenesis [BR:
xma03016
]
102233512
03012 Translation factors [BR:
xma03012
]
102233512
04131 Membrane trafficking [BR:
xma04131
]
102233512
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xma04147
]
102233512
Messenger RNA biogenesis [BR:
xma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
102233512
Transfer RNA biogenesis [BR:
xma03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
102233512
Translation factors [BR:
xma03012
]
Eukaryotic type
Elongation factors
102233512
Membrane trafficking [BR:
xma04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
102233512
Exosome [BR:
xma04147
]
Exosomal proteins
Proteins found in most exosomes
102233512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
102233512
NCBI-ProteinID:
XP_005805806
Ensembl:
ENSXMAG00000012048
UniProt:
M4AC78
LinkDB
All DBs
Position
5:16225523..16232139
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKLHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPNYSQKRYEEIVKEVSTYIKK
IGYNPDTVAFVPISGWNGDNMLEPSPNMAWFKGWKINRKDGSASGTTLLEALDAIQPPTR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPVNVTTEVKSVEMHHEALS
EALPGDNVGFNVKNVSVKDIRRGNVAGDSRNDPPQEAAGFTSQVIILNHPGQISAGYAPV
LDCHTAHIACKFAELKEKIDRRSGKKLEDNPKFLKSGDAAIVDMIPGKPMCVESFSEYPP
LGRFAVRDMRQTVAVGVIKGVEKKAPTSGKITKSAQKAQKAK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggagaagctccacattaacattgtggttataggacatgtggactcagggaag
tccaccaccacaggccacctcatctacaagtgtgggggcatcgacaaaagaacgattgag
aagtttgagaaggaagctgcagagatgggaaaaggatcctttaaatatgcctgggttttg
gacaaactcaaggcagagcgcgaacgtggaatcaccattgacatctctctctggaagttt
gagacaagcaagtattatgtcaccatcattgacgctccgggacacagagacttcatcaag
aacatgatcactgggacatcccaggctgactgtgctgtgttgattgtggctgcgggtgtg
ggcgagtttgaagctggcatctcaaagaacgggcagactcgtgagcatgccttacttgcc
tacactctgggagtgaagcagctcatcgtaggtgtcaacaagatggattcaactgagccc
aactacagccagaagcgctatgaagagattgtgaaggaagtcagtacttacatcaagaag
attgggtacaatcccgacaccgtggcttttgtacccatctcaggctggaatggagacaac
atgttggagcccagtcctaatatggcctggttcaaaggctggaagatcaatcgtaaagat
ggcagtgcctcaggcaccactctgctggaggctcttgatgccatccagcctccaacccga
cccactgacaagcctcttcgtctgcccctgcaggacgtttacaaaattggaggtattggt
actgtgcctgtgggtcgagtagaaacaggaatcctgaaacctggtatggtggtgactttt
gctcccgtcaatgtgaccactgaagtcaagtcagtggagatgcaccatgaggccctgagt
gaggcgctacctggagacaatgtgggctttaatgtcaagaacgtctctgtgaaggatatt
cgccgaggtaatgtggctggagacagcaggaacgacccaccacaagaggcagctggcttc
acctcccaggtgattatcctgaaccaccctggtcaaatcagtgctggctatgcccctgtg
ctcgactgccacactgcacatatcgcttgcaagtttgcagagctgaaggaaaagatagac
cgccgctctggaaagaagctggaggataacccgaagtttctcaaatctggagatgctgct
attgtggatatgatcccaggcaagcctatgtgtgtggagagcttctctgagtacccaccg
cttggccgttttgctgtccgagacatgcgtcaaacggtggcggtgggagtgattaaaggc
gtggaaaagaaagcccctacaagcggtaaaatcaccaagtctgcacagaaggcacagaag
gccaaatga
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