Xiphophorus maculatus (southern platyfish): 102233548
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Entry
102233548 CDS
T02923
Symbol
rbl1
Name
(RefSeq) retinoblastoma-like protein 1
KO
K04681
retinoblastoma-like protein 1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04110
Cell cycle
xma04218
Cellular senescence
xma04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
102233548 (rbl1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
102233548 (rbl1)
04218 Cellular senescence
102233548 (rbl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xma03000
]
102233548 (rbl1)
Transcription factors [BR:
xma03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
102233548 (rbl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
Rb_C
Motif
Other DBs
NCBI-GeneID:
102233548
NCBI-ProteinID:
XP_023181368
Ensembl:
ENSXMAG00000014582
UniProt:
M4AJJ3
LinkDB
All DBs
Position
20:complement(5988346..6002850)
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AA seq
1055 aa
AA seq
DB search
MRGEESSDSESGRMEESSVRRSLETLCQELNMDEQTAAEAMDNFTAIWNTYSLEGEVVHW
LACALYSACRKGSTPTVGKGLMEGNCVSLTRILRCAKLSLIQFFSKMRKWADMSNLSQDF
RLRMDRLERNFEVSTVIFRKFEPIFRDMFVNPQGCEAPRQPRSRKHRRLPCHITDVFKFC
WTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLVFGNALLCANRKELINPSFRGVPPSFRLD
GPAPQLEAPPCVLEKLCELHDGLVVEAKGIKQHYFKPYIHKLFHKQILKGNETLFTEMLD
PQNFIDNNKAINKEYEEYVLTAGDFDERVFLGADADEEIGTPRKFVQERFASQAAAQRDG
QQVEKRGSLAPSTPLTGRVYLKEKDLLFTPVSAATQSVTRLQSMVAGLRMAPSENLLQIF
RSCSRDPTDSILARVKALGQTFKEHYTNDSEDTPGSHIDFAESRWKLAEILYHKVLENVL
VQETKRLQGRDMSVLLEQDIFHCSLMACCLEVVLFSYSSQRTFPWIISIFKLPPFYFFKV
IEVFIRSEERLSRDMVKHLNAIEEQVLESRAWASDSALWSALEAAGGKVPTVEEVNFSSC
LDPGSGSGSSNGQSHLPLMAQSPIIHPRIREFRSGLGSSRKEVPPSPVSVHDRYSSPAAG
SAKRRLFGDDPPAPPAGLNIAVSPTPSPVKRLTFGTSQKNGGQSAVLSIPLQGERAFALI
PVQPCDSSGVVTAHFLLTSSPGRVAVATATSSTDPQAGTGRPQRTGSLALFFRKVYHLSS
VRLRDLCLKLDVSSDLRQKIWTCFEHVVVQCSDLMKDRHLDQLLLCCVYIIAKITKETIT
FQDIMKCYRSQPQASSHVYRSVLLRHTPREQPADENMEVDSVSGGESAEKTNQQPAGRHP
DQSEEEERGDLIQFYNMVFVLKMKSFAMRYATGDARADAPPLSPFPSVRAQPLSPRRVSQ
RHSLYVSPHKNSAGSLTPNSFTYRINSSPSKELLDINRMIRQGAVSRKRAFTMEGDVMMS
SACDSPNKRACPENGSGPDVLLKRLQDVVSERQSH
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcgaagagtcgtcggattccgagtcggggaggatggaggagagttcggtccgg
aggagtttggagactttgtgtcaagaactgaacatggacgagcagaccgcagctgaagcc
atggacaacttcacagcaatatggaatacatactccctggagggagaggtggtccactgg
ctggcctgtgcgctgtactcggcctgcaggaagggctccactcccaccgtggggaagggg
ctgatggaggggaactgcgtctcgctcaccaggatcctgcgctgcgccaagctgagcctc
atccagttcttctccaagatgcggaaatgggccgacatgtccaacctgtcgcaggacttc
agactgcggatggaccggctggagcgcaactttgaggtttccacggtgatcttccgtaag
ttcgagcccatcttcagggacatgttcgtgaatccccagggatgcgaggcaccacggcag
ccgcgcagcaggaagcacaggcggctgccctgtcacatcactgacgtgttcaagttctgc
tggacgttgttcgtctacactaaaggaaacttccggatgatcggagacgacctggtgaac
tcgtaccacctgctgctctgctgcctggacctggtgttcggcaacgctctgctgtgtgcc
aacaggaaggagctgatcaaccccagcttcagaggtgtgcctccctcgttccgattggac
ggccccgccccccagctcgaggctccgccctgcgtcttggagaagctgtgtgagctgcat
gacggcctggtggtggaggccaaaggcatcaagcagcattacttcaagccgtacatccac
aaactgttccacaaacagatcctgaaaggaaacgagacgcttttcactgaaatgttggat
cctcagaattttattgacaacaataaagccataaacaaggagtacgaggagtacgttctg
acggcgggagacttcgatgagcgcgtcttcctgggagccgacgccgacgaggaaatcgga
acgccaaggaagtttgttcaggagagattcgccagccaggctgcagctcagagagacggg
cagcaggtggagaagcgcggctccctcgccccgtccactcccctgacgggacgcgtctac
ctgaaggagaaggacttgctgttcacacccgtctccgcggcgacgcagagcgtgacccgg
ctgcagagcatggtggcgggtctgaggatggctcccagtgaaaacctgctgcagatcttc
aggtcctgctccagagatcccactgactccattctggctcgggtcaaagctttgggacaa
accttcaaggaacattacaccaacgactccgaggacacgccgggatctcacatcgacttc
gctgagagccgctggaagctggctgagatcctctaccacaaagtcctggagaacgttctg
gtccaggagacgaagcgtctgcagggccgggacatgagtgttctgctggagcaggacatc
ttccactgttccctgatggcgtgctgcctggaggtggtcctgttctcctacagctcccag
agaaccttcccatggattatcagcatcttcaagctgccgccgttctacttcttcaaggtg
atcgaggtgttcatccgctcagaggaacgtctgtcccgcgacatggtgaagcatctgaac
gccatcgaggagcaggttctggagagccgggcctgggcctcggactccgccctgtggagc
gccctggaggccgccggcgggaaagtccccacggtggaggaggtgaacttctcgtcttgt
ctggatccgggttccggttccggttcctctaacggccagtctcatctgccactgatggcc
cagtctcccatcatccaccctcggatcagggagttcaggtcgggtctgggaagttcacgg
aaagaagttcctccgtctccggtgtcggtccacgacaggtacagctctccggctgccggc
agcgccaagcgccggctctttggcgacgacccgccggcgccccctgctggcctgaacatc
gccgtcagcccgacgccgtctccggtcaagaggttgacgtttgggacgagccagaagaat
ggaggccagagcgccgtgctcagcatccctctgcaaggtgagcgagcgttcgccctgatc
ccggtccaaccctgcgactcctccggcgttgtcacggctcacttcctgctgacttcatcc
ccgggtcgggttgccgttgccacagcgacctccagcaccgacccccaggcggggaccggg
cggccgcagcgaaccgggtcgctggcgctgttcttcaggaaggtgtaccacctgtccagc
gtgcggctcagagatctgtgcctgaagctggacgtgtcgtcggatctgcgccagaaaatc
tggacgtgttttgagcacgttgtggttcagtgcagcgatctgatgaaggaccgacatctg
gaccagctgctgctctgctgcgtctacatcatcgccaagatcaccaaagagacgatcacc
ttccaggacatcatgaagtgttaccgcagccagccgcaggccagcagccacgtgtaccgc
agtgtgttgcttcgtcacactcccagagagcagccagccgatgaaaacatggaggtggac
tccgtgtctggaggagaatctgcagagaaaaccaatcagcagccagcaggcagacatcct
gaccaatcagaggaggaggagcgtggtgacctcatccagttttacaacatggtgttcgtc
ctgaagatgaagagcttcgctatgcgctacgccaccggcgacgcccgggccgacgccccg
cccctctctccgttcccgtcggtccgcgctcagcctctgtcgccacggcgcgtcagtcag
agacactcgctctacgtttcacctcacaagaactcagcagggagtctgacgccaaactcc
ttcacctacaggatcaacagcagcccgtccaaggagctgttggacatcaaccggatgatc
cgccagggcgccgtcagcaggaagagggccttcaccatggagggcgacgtgatgatgtca
tcagcgtgcgactcgcccaataagagggcgtgtccggagaacggcagcggtcccgacgtt
ctgctgaagcgcctgcaggacgtcgtgtccgagcgccagagtcactga
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