Xiphophorus maculatus (southern platyfish): 102233586
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Entry
102233586 CDS
T02923
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3 isoform X1
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04010
MAPK signaling pathway
xma04260
Cardiac muscle contraction
xma04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102233586
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
102233586
04261 Adrenergic signaling in cardiomyocytes
102233586
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xma04040
]
102233586
Ion channels [BR:
xma04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
102233586
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
dCache_1
VWA
VWA_3
VWA_2
dCache_2
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
102233586
NCBI-ProteinID:
XP_023190423
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Position
1:17151017..17264371
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AA seq
1081 aa
AA seq
DB search
MQVGRCCRFMWLVLLFSTQNIGATGVGGTHQSIPPSVVKLWASAFGGEMKSISAKYSGSQ
LLQKKYKEFERAVRVEEIDGLRLVKRLAKNMEEMFHKKAQAMKRLVEAAEEAHLQHEENP
DLQYEYFNAVLINEDVELGGKFVLQPNDHFNNRSVNLSLSVVQVPTNMYNKDSAIVNGVY
WSEALNKVFVDNFERDPSLIWQYFGSAKGFFRQYPGIKWKPDDHGVIAFDCRNRKWYIQA
ATSPKDVVILVDVSGSMKGLRLTIARQTVSSILDTLGDDDFFNIIAYNEELHYVEPCLNG
TLVQADVTNKDHFREHLDKLFAQGIGMLDIALTEAFNLLSDFNKTGRGSECSQAIMLVTD
GAVDTYDAIFEKYNWPERKVRIFPYLIGRESAFADNLKWMACANKGYFTQISTLADVQEN
VMEYLHVLSRPKVIDREHDTVWTEAYIDSTLPQAQKSDDGQGPVLMTTVAMPVFSTKNET
RNRGILLGVVGTDVPVSELLKTIPKYKLGIHGYAFAITNNGYILTHPDLRPLYGDGKKRR
KPNYSSVDLSEVEWEDKDDTLRNAMVNRKTGTFSMEVTKSVDKGKRVLVLHNDYYYTDIK
GTPFSLGVALSRGHGKYFFRGNVTVEEGLHDLEHPDVALADEWTYCNTDEHPKHRYLSQI
DAIKMYLSGQEPRLHCDKELIQEVLFDAVVTAPLEAYWTSLVLNKSENSDKGVEIAYLGT
RTGLSRINLFVVPDELTNLDFLTAEDKEGVFNADHFPLWYKRAAEQVPGTFIYSLPFNSG
SENRSVVLASTAIQLLDERKSPIAAAVGIQMKLEFFQRKFWTASRQCAALDGKCSISCDD
EHINCYLIDNNGFILVAEDYTLTGNFFGEAEGAVMNKLLQMGSFKRVTLYDYQALCWVHS
ESSDSGRTLLDPYFAFFAAVKWILTELVIFLVEFNLYSWWNSDLTAKARRVGPHMQVPCD
TEYPAFVSERTIKENMGNIDCDGCIKSFVIQQIPSSNLFMVVVDNKCDCSQFGPITMDPF
EIMYNESLKCERLKMQKDRRRPDTCHPFHPEENSMECGGAGGLTTSLSATLLLALMALLH
R
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgggtcggtgctgtcggtttatgtggctggtcttacttttctcaactcaaaac
atcggggcaactggagttggaggcacccaccaaagcatccccccgtccgtggtgaagctc
tgggcctctgcatttggaggggagatgaagtccatctctgcaaagtactctggctcccag
cttctgcaaaagaaatacaaggagtttgagcgggcggtgagggtggaggagattgatggg
ctacgactggtgaagaggctggctaagaacatggaagagatgtttcacaagaaagcccag
gctatgaagcgattggtggaggcagcagaggaagcccatctacagcatgaagagaatcca
gacctgcagtatgaatacttcaatgctgtgctgatcaatgaggatgtagagctgggagga
aagtttgtcctgcagcccaacgatcattttaacaaccgatcagtcaacctcagcctcagt
gtggtacaggtgccaaccaatatgtacaataaagattctgcaattgtcaatggtgtgtac
tggtcggaggccctgaacaaggtgtttgtggataactttgagagggatccctcgcttata
tggcaatactttggcagtgctaagggcttttttagacagtatcctggaatcaaatggaag
ccagatgaccatggagttatagcttttgactgtcgtaatcgaaagtggtacatccaggca
gccacctctccaaaggatgtcgtgatcttggtggatgtcagcggcagcatgaaaggcctg
agacttaccattgccaggcagacggtttcctccattctagacactcttggagatgatgac
ttttttaatatcattgcttacaatgaggaactgcattatgtggagccatgtctgaacgga
actctggttcaagctgatgtcaccaacaaagatcatttccgggagcaccttgataagctg
tttgctcaaggcattggtatgttggacatagctctgacggaggcgttcaatcttctcagt
gattttaataagactggaaggggcagtgagtgtagccaggccattatgctggtgacagat
ggagcagtcgatacatacgatgccatctttgagaagtataactggccagagaggaaggtt
cgaatattcccctacctgattggtcgggagtcagcctttgcagataatttaaaatggatg
gcgtgtgctaacaaaggttacttcactcaaatttctacgctggctgatgttcaagagaat
gtgatggagtatctccatgtcctgagtcgtcccaaagttattgaccgggagcatgacaca
gtgtggactgaggcatacatcgacagcactctcccccaagcacaaaagtcggatgatggt
caaggtccagtcctgatgacaacagtagcaatgccagtgttcagtaccaagaatgagact
agaaacagaggaatcctgcttggggtggttgggacagatgtgccagtttctgagctgctc
aaaaccattcccaaatataagctgggtattcacggctatgcctttgcaatcaccaacaat
ggctacatcctcactcacccagatctacggccactttatggtgatggcaaaaagcgaagg
aagccgaactacagcagtgtggatctgtctgaagtggaatgggaggataaggatgacacg
ttgagaaatgccatggtcaacaggaagacggggaccttctccatggaggtgacgaagagt
gtggacaaagggaaacgtgtactggttttacacaatgattactactacacagatattaaa
ggcactcctttcagtctaggagttgctctttctagagggcatgggaaatatttcttcaga
ggcaatgtcaccgtggaagaaggacttcatgacttggagcatcctgatgttgcactggct
gacgaatggacatactgcaacacagacgagcaccccaagcatcgctacttgtctcaaata
gatgcaataaaaatgtatctcagtgggcaggaacctcgcttgcattgtgacaaggaactt
atccaggaagttctctttgatgcggttgtgaccgctccacttgaagcctactggaccagt
cttgtgctcaataagtcagaaaactcagacaaaggtgtggagattgcctatcttggcaca
aggacagggctgtccagaattaatctatttgtggtgcctgacgaactcacaaacctagac
ttcctgacagctgaagacaaagagggagtgtttaatgctgatcactttcctctatggtac
aagagagcagcagaacaagttcctggcacctttatttattctctgcctttcaactcaggt
tcagaaaacaggagtgttgtattggccagtactgccattcagcttctggatgagaggaaa
tcccccatagctgctgctgttggcatccagatgaagttggagtttttccagagaaaattt
tggacagccagcagacagtgtgcagcattagatgggaaatgctccataagctgtgatgat
gagcatattaactgctacctcattgacaacaatggcttcattcttgtagcagaagactat
acactgactggaaatttttttggtgaagcagaaggagctgtaatgaataagttgctgcag
atgggctcttttaaacgtgtcacactgtatgactaccaggctctttgttgggtccattca
gaaagtagtgacagtgggcgcacactcctggatccttacttcgctttctttgctgctgta
aagtggatcctgactgagcttgtcatattcctggttgaattcaacttatacagttggtgg
aactctgatctcacagccaaagctcgaagggtaggtccgcatatgcaggtgccatgtgac
acagagtaccctgccttcgtctcagaaagaacaatcaaggagaacatgggcaacatcgac
tgcgatggctgcatcaagtcatttgtgattcagcagatccccagcagtaacctttttatg
gttgtggtggacaacaagtgtgactgcagccagtttggacccatcaccatggaccccttt
gaaattatgtataacgaatcgctcaagtgtgagagactgaagatgcaaaaagacaggagg
cgtccagatacctgtcacccttttcatccagaggagaattcaatggagtgtggaggagct
ggcggtctcaccacatcgcttagtgccacgctgcttttagccctcatggcattgctccat
aggtga
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