Xiphophorus maculatus (southern platyfish): 102233672
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Entry
102233672 CDS
T02923
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma02010
ABC transporters
xma04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
102233672
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
102233672
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xma02000
]
102233672
Transporters [BR:
xma02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
102233672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
102233672
NCBI-ProteinID:
XP_005806547
Ensembl:
ENSXMAG00000006487
UniProt:
A0A3B5RBV6
LinkDB
All DBs
Position
5:complement(24217926..24254115)
Genome browser
AA seq
2270 aa
AA seq
DB search
MAVSTQLGLLLWKNFTYRRRQTIQLLIEIIWPLFIFFILISVRMYYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRNPTPGETPGIVGNFNDSIISRLFNDAKKILLYTQNDK
SYEGYRGMLGALRKLQKNPARFKLKDFLRDDETLSHFLHHNASLPHHTLKQILEADVNLE
KVLTKGFGFHLRDLCNVTPLEEFVHIADRNVSHLTQEIICKSSSNWLNKAQNHFLSNLDF
LKPIRKDVSSDPKAVQDVSAATNNLLESLGTLGVELASMKSWKDMRKEILYLTANSTGSP
KQMYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGHHGNDSDSEPMSTYDNSSTPYC
NNLMKNLESSPISRMIWRALKPLLMGKILYTPDTPATQRIIHEVNKTFQELGVLRDLGGM
WEEMKPKFWSFMENSEEMDLVRSLLQSNTSAAFLDAQLSETEWSVSDVADFLTKASEDRR
PSGSAYTWRDAFNETDRAIKTISQFMECVNLDKLESVPNEERLVNKSMGLLDNQKFWAGI
VFPNIAPNSTDLPPNINYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYVWGGFSYL
QDVIEQGIIRAITGTEEKTGIYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAIII
KGVVYEKEARLKETMRIMGLNNGTLWLSWFISSLIPLLISAGLLVMLLKMGNLLPYSDSG
VVFLFLGSFGVVTIMQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFGAK
LVVSLLSPVAFGFGCEYFALFEEQGVGIQWSNLLASPLEEDSYNLTTSICLMLFDAVLYG
IMTWYIEAVFPGQYGIPRPWYFPFTRTYWCGEKENQNINTPLSKKSNADAVCFEEDPSHI
DPGVYIENLVKIYSHGNKLAVDGLTLKFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSG
TAYILGKDIRSELSTIRQNLGVCPQHNVLFSMLTVEEHIWFYARLKGLPEEKVKAEMEQI
VNDVGLPHKRKSRTSTLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLL
KYRQARTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTHLGTGYYLTLVKRDYD
LSLQSCRNSASTVSYMKKTEKEDSVSESSSDAGLGSEPESETTTIDVSLISSVIFKHVSE
ARLVEDLGHEITYVLPYQSAKDGAFVELFHELDDRLTDLGISSYGISDTTLEEIFLKVAE
DSGVDSVELSDGVVPTRTRRRHAFGDHQSCLKPFTEDDFDFNDSEGDPESRETDWLGGTD
GKGSYQVKGWSLKRQQFVALLWKRFLYARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFG
KYPSLALHPSMYGEQFSFISNDIPEEPHNNKLLGALMDKPGFGTRCMEGEPIPDTPCVEV
KDDWMLPQVPQSVSDIFDKGNWTMENPSPLCECSCEGRKRMLPECPAGAGGLPPPQMMIS
DKDTLQNLTGRNVSDYLVKTYAQIIGKSLNNKIWVNEFRYGGFSLGARGSHVLSHTGDID
EAIVQLRQLFQLEQGTAAHRFFSSLSGFIQGLDTKNNVKIWFNNKGWHSIGSFLNVMNNA
ILRSSLKPGQDPTKFGITAYNHPLNLTKEQLSQVALMTTSVDVLVSICVIFAMSFVPASF
VVFLIQERVTKAKHMQFISGVQPLLYWLANFIWDMCNYIVPAALVIIIFVCFQQEAYVSS
TNLPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGINGSVSTFVLELFG
SNEIGGINDILKNVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFRSPLAWDMVGKN
LFAMAIEGVIFFCITVLIQYRFCFKARSSTGHLKPIGEEDEDVARERQRILSGGGQLDIL
ELRQLTKIYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLTGDSDVTSGEAYL
AGKSVNTEINEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEKEVCEVAEWGIRKL
GLIKYVDKAAGSYSGGNMRKLSTAIALIGGPPVVFLDEPTTGMDPKARRALWNAILSIIK
EGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIILRVAGPDPDL
RLVMEFIERELPGSTLKEKHRNMLQYQLPSSLTSLARIFSLLSKNKEALSIEDYSVSQTT
LDQVFVNFAKDQSDEDHLKDIHLSKRDAVVVDLSQLNSFLTDSKTRESCV
NT seq
6813 nt
NT seq
+upstream
nt +downstream
nt
atggcagtctccactcagctgggtctactgctatggaagaacttcacctacagacgaaga
caaaccatccagctgctgattgaaatcatttggcccttatttatcttcttcatcctgata
tcagtccggatgtattatcctccctatgaacaacatgaatgtcactttcctaacaaggcc
atgccctcagcaggtaccctgccctgggtacaaggcattatctgtaatgccaacaatccc
tgctttcgtaatccgacccctggagaaactccaggcatagttggaaattttaatgactcc
ataatttcccgtctgtttaacgatgccaagaagattcttctgtacacccagaacgataag
agctacgaaggctaccggggaatgctgggagccctcagaaagcttcagaagaaccctgct
cgattcaagctgaaagacttcttgagagacgatgaaacgctttctcacttcctgcaccac
aacgcatcgctccctcatcacacgttgaagcaaattttggaggctgatgtcaatttggag
aaggtgctcacaaaaggttttggattccatctcagagatctttgcaacgtaacaccgcta
gaggagtttgtccacattgcagaccgtaacgtgtcccacttgactcaagagatcatctgc
aaatcatccagtaactggctgaacaaggctcagaaccacttcctctccaatttggacttt
ctgaaaccgattcgaaaggatgtgagttcagaccccaaagctgtccaagacgtctcagct
gcaaccaacaacctcctggagagcctcggcacacttggcgttgagcttgccagcatgaag
agctggaaagacatgaggaaggagatcctgtatctgactgcaaactcaacaggatctccg
aagcagatgtaccaggccgtgtcgcgtattgtttgcggacatccagagggaggcggcctg
aagatcaaatccctcaactggtacgaagacaacaattacaaggctctgttcggacaccac
ggcaacgacagtgacagtgagcccatgtccacctatgacaactcttcaactccttactgt
aacaacctaatgaagaacctggagtccagccccatttccaggatgatttggagagccctc
aaacctcttctaatggggaagatcctgtataccccagacactccagcaacacagaggatc
attcacgaggttaacaagaccttccaggagctgggggtgctgagagatctgggcggcatg
tgggaagaaatgaaacctaaattttggagcttcatggagaacagcgaagagatggactta
gtcaggtccttgctccaaagcaacaccagcgctgctttcctggacgctcagctcagtgag
accgagtggagtgtgtccgacgtggcggacttcctcacaaaagcctcagaggaccgcaga
ccttcggggtcagcttacacatggagggacgcgttcaatgaaaccgatcgtgccataaag
actatttcacagtttatggagtgtgtgaacttggacaaactggagtcagtccccaacgag
gaacgcttggtcaacaagtccatgggtcttctggataaccagaagttctgggcgggaatc
gtgtttcccaacatcgctcccaatagcaccgacctgcctcccaacatcaactacaaaatc
cgcatggacatcgataatgtggagaggacgaacaagatcaaagacggatactgggatcct
ggtcccagagcggacccctttgaggacctgcggtacgtctggggtggattttcttacctg
caggatgtcattgagcaaggaatcatccgagccatcactggtactgaggagaagacgggc
atttacatccagcagatgccctacccttgctatgttgatgatatattcctgcgagttatg
agccggtcaatgcctctcttcatgactttggcctggatgtactctgtggccatcatcatc
aaaggcgtggtgtatgagaaggaggcgcgactgaaggagaccatgaggatcatgggactg
aataacggcaccctgtggctgagctggttcatcagcagtttaatcccactgctgatcagc
gccggcttactggtgatgttgctgaagatgggaaacctattgccgtacagcgactcaggc
gttgtgtttcttttcctgggatccttcggtgttgtaaccatcatgcagtgttttctgatc
agcactctgttttcacgtgccaacctggcggcggcctgcggaggaataatatacttcacc
ctctacctgccctacgttctgtgtgttgcttggcaagattacgtgggatttggagcaaaa
cttgtagtgagtcttctgtcccctgtggcttttggcttcggctgtgagtactttgccctg
tttgaggaacaaggtgtgggaatccagtggtctaaccttctagcaagccccctggaggag
gacagctacaacctgaccacctctatatgcctcatgctgttcgatgcagtgctgtacgga
ataatgacttggtacattgaagccgtttttcctggtcagtacgggatccccaggccttgg
tatttccctttcacaagaacatattggtgcggagagaaggagaatcaaaacattaatact
cctctgtcaaagaagagcaacgctgacgctgtgtgcttcgaggaggacccaagccacatc
gacccgggtgtttacattgaaaacctggtgaagatctacagccatggaaacaagctggct
gtggacggattgacccttaaattctatgaaggccagatcacctccttcctcggccacaac
ggggctggcaagactacaaccatgtcaatcctgaccggactgttcccacccacctctggc
accgcctacatcctcggcaaggacatccgctccgagctcagcaccattcggcagaacctg
ggggtctgcccccagcacaatgtgcttttcagcatgttgaccgtcgaggagcacatctgg
ttctacgctcgcctgaagggcctgcctgaagagaaagtgaaggctgaaatggaacagatc
gtcaacgatgtcggactgccacacaagcgaaagtctcgcaccagcacgctgtcaggtgga
atgcagaggaagttgtctgtagcgctggcgtttgtcggaggttctaaggttgtcattctg
gacgagcctactgctggtgttgatccgtacgcacgcaggggaatctgggatctgctcctt
aaatacagacaagcccgcaccatcatcctttccacccaccacatggatgaggctgacatc
ctgggcgaccgtattgctatcatttcccatggcaagctgtgctgtgtgggctcctctctc
ttcctgaagactcacctcggaaccggctactacctgacgctggtcaagagagactacgac
ctgtctctacagtcctgcaggaattctgccagcaccgtctcctacatgaaaaagacagag
aaggaggacagcgtatcagagagcagttcagatgctggtcttggcagcgaacctgaaagt
gagactaccactattgacgtctccctcatctccagtgtgattttcaaacacgtctcagag
gctcgtctggtggaagatctcgggcatgagatcacctacgtcttgccataccagtcggct
aaagacggcgcttttgttgagcttttccatgagcttgatgatcgacttactgacttagga
atttcaagttacggaatttctgacaccaccttggaagagattttcctgaaagtggcagaa
gatagcggtgttgattctgttgagctttcagatggagtcgtaccaaccagaacccgacgg
cgacatgcttttggagaccaccagagctgcctgaagcccttcaccgaggatgactttgac
ttcaatgactctgaaggtgacccagaatctcgtgagactgactggctcggtggaacagat
ggcaaaggttcatatcaggtcaaaggctggagtctgaagagacagcagtttgttgcgctc
ctgtggaaacggttcctctacgctcgccgctctaggaaaggctttttcgctcagattgtt
ctgccagcagtgtttgtgtgcattgcactggtcttcagcctcattgttcctccgttcggg
aaatacccgagtctggctctgcatcccagcatgtatggagagcagtttagcttcatcagt
aacgacatacccgaagaaccccacaacaacaaactgctgggagctttgatggacaaacca
ggatttggaactcgatgcatggaaggagagcccataccggacactccctgtgtggaggtg
aaggatgattggatgctccctcaggttcctcaaagtgtcagtgatatattcgacaaaggc
aactggaccatggaaaacccgtctccactgtgtgagtgcagctgtgaaggccgtaagagg
atgctgcccgagtgtcccgctggggccggtggacttccaccgccacagatgatgatcagt
gacaaagacacactgcagaatttgactggtagaaacgtgtcggactacctggtcaaaacc
tacgctcagatcatcggcaagagcttgaataacaagatctgggtcaatgagttcagatac
ggtggattctctctgggcgcccgaggttcccatgttttgtcccacacaggtgatattgat
gaagctattgtgcaactcaggcaactcttccaacttgaacagggaacggcagcccatcgt
tttttcagcagtctctctggttttatccaaggattggacacaaagaataacgttaagatt
tggtttaacaacaagggctggcacagcattggctccttcctcaacgtgatgaacaacgcc
attctgcggtcgagtctcaaacctggtcaagacccaacgaagtttggcatcaccgcttac
aaccatccactaaacctcaccaaggagcagctctcacaagttgcattgatgacgacatct
gtggacgtgttggtgtccatttgtgtcatcttcgccatgtcctttgtccctgccagtttt
gtggtcttcctcatccaggagagagtaacaaaggccaaacacatgcagttcatcagtggt
gtgcagcccttgctttactggctggccaactttatttgggatatgtgtaactacatcgtt
ccagctgcgctagtgatcatcatatttgtctgtttccaacaagaagcctacgtttcttcc
accaatctaccagtactggctctgctgcttctcctctatgggtggtcaatcacccctctg
atgtacccagcctctttcttctttaagatccccagcactgcctacgtagttctaaccagt
gtcaacatactgattggaatcaatggcagtgtgtccacgtttgtcctggagttgtttgga
agtaatgagattggtggtattaatgacatcttgaagaatgtattcctcatcttccctcac
ttctgcctgggtagaggactgattgacatggtgaagaatcaagccatggctgatgcttta
gagagatttggtgaaaaccggtttcgctctcctctggcatgggacatggtgggaaagaac
ctgttcgccatggctatagagggagttattttcttctgcatcaccgtcctcattcagtac
cgcttctgctttaaagccagatcctccaccggccatctgaaaccaattggagaagaggat
gaagatgttgccagagagcgacagaggatcctgagcggcggtggacagttggacattctt
gagctgaggcagctcaccaagatttacaagcggaaacagaagccggccgtggaccggctg
tgtgttggcatccctcccggagagtgttttggtttgcttggggtcaacggagcaggaaag
accagcaccttcaaaatgttgactggagactcagatgtgaccagcggtgaggcctactta
gctggcaagagcgtaaacacagaaataaacgaggtgcatcagaacatgggctactgtcct
cagtttgatgccatcaatgaccttctgactggaagagagcacctcgagttctacgccatc
ttgagaggagtacctgagaaggaagtctgcgaggtggcagagtgggggatacggaaactg
ggattgatcaagtatgtggacaaagcagcagggagctatagtggaggaaacatgaggaaa
ctctccactgccattgcactcataggaggaccccctgttgtgtttttggatgaaccaaca
acaggaatggaccctaaggcacgtcgggccctctggaacgccatcctgagcatcatcaaa
gagggacgttccgtggtcctcacctcccacagtatggaggagtgtgaagcactctgtacc
agaatggctatcatggtgaacggcaggttccgctgtctgggcagtgtgcagcaccttaaa
aatcggttcggagacggctacaccatcatcttgcgcgtggcgggaccggacccggaccta
cggctggtgatggagttcatagagcgggaattgccggggagcacgttgaaggagaaacac
cgcaacatgctacagtaccagctcccgtcttcgctcacctccctcgcccggatcttctcc
cttctctccaaaaacaaggaggcactcagcatagaggactactctgtctctcagactact
ttagaccaagtgtttgttaatttcgccaaggaccaaagtgacgaggaccacttgaaagac
atccacctgagcaagcgggatgcagtcgtggtggacctttctcaattgaactctttcctc
acggacagcaaaacaagagagagctgcgtctga
DBGET
integrated database retrieval system
