Xiphophorus maculatus (southern platyfish): 102233680
Help
Entry
102233680 CDS
T02923
Name
(RefSeq) whirlin-like isoform X1
KO
K21879
whirlin
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xma03037
]
102233680
Cilium and associated proteins [BR:
xma03037
]
Primary cilia and associated proteins
USH complex and associated proteins
102233680
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
USH1C_N
HHD_RTEL1
CCM2_C
Motif
Other DBs
NCBI-GeneID:
102233680
NCBI-ProteinID:
XP_014327345
Ensembl:
ENSXMAG00000004260
UniProt:
A0A3B5QS27
LinkDB
All DBs
Position
11:complement(708428..754078)
Genome browser
AA seq
978 aa
AA seq
DB search
MSADLERASPNTSVNSAGVGSRALSTNVRRLHNTLNVLLSDLEREQFIHCLNVYHAKRNV
YDLVQTLKVILNTPAKRQLLPMLRLVIPRSDQLLFDQYTSEGLYLKTDLLPSNGSAESFG
DEGDSTLQSYISSVCEQPPTTTCPEPTVSTAPLFSEGLFGEVRQVTLTRSRSQEGLGFSI
RGGSEHGVGIYVSLVEPGSSAEREGLRIGDQIVAANDSVFDSVSHTEAVKVLKGCKKLTM
SVCSMGRIPGGYMTNRVYSWLDPQGRSVSPPPDSQEADLRQGHGMEERTVNLNMDNGRSL
GLMIRGGAEYGLGIYITGVDPGSAAHVGELKVGDQILEVNGQSFVTISHDEAVNILKSGH
HLLMRLRDVGRLPHARTIVDETKWICGQVIAETNATSGLNSVSHPSVGAVGHSSISASGN
NTRPSSARATPVFGKSAGYRGVSPPGAQVSLEQQAYMLLTEQERQTMAYYLQEYQQGHIN
VEPLTMALSELFNTHAKLSLLSEVRSLVAPQDLEVYDRLVLHHQREAHQAWQGGLRVLHP
SGHCSHAALVIHDAGQISHPVAEASTGNWIEKEQEKNRNGFRNISLDEARSSPPPFRAAP
VQAQNIQTRDKELSQRPAARLLQPSSSVPLPGPTRLLQECFHKSLKSFPTSQQPFSTSAQ
HTCAATKHHTSLSTLQHTCQSTPHLSGSEQYTHSHFTQHTGHFNRLTSGHQTCPGFLHHR
DCSIFVQPEAAVKLSSRSSSYEKSSVFSKSASSSKEASPMPSPHPSPRPSPCPSPCPSHM
IPASLSCSPDRPCSPALTHKIIVTDMNRLSADSRQQQRGALSQLSDSGQTLSEDSGVDIG
ETGGLTKDGSPRPTKNKQGHLELQGAHTHPTGATRQQTSSPISALNTALVRVVKNSNTLG
IAIEGGANTRQPLPRIVTIQKGGSAHNCGQLKVGQVILEVNGISLRGQEHEEIARIIAEA
FKTKERDHIDFLVAELGF
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctgatctggagcgcgcttcgcccaacacatcggtgaactcggccggcgtaggg
agccgtgcgctctcgacaaatgtccgaaggctccataacacactcaatgtgctgctaagt
gacctggagagagagcaatttatccactgtctaaatgtttaccacgccaaacgcaacgtt
tacgacctggtccagactctcaaagtgattctcaacacgcccgcgaagcgacagctgttg
cccatgctgcgtctcgtcatccccaggtccgaccagctcctctttgaccagtacacctcc
gaggggctctacctgaaaacagacctgctgcccagcaacggcagcgcggaaagcttcgga
gatgagggcgattccactctgcagtcgtatatcagctcagtctgcgagcagcctcccacg
acgacttgtccggaaccgactgtttccacggccccgctcttcagcgagggcctcttcgga
gaagtgcgtcaagttaccctgacgcgctccaggagccaagaaggtctaggttttagcatc
cgcggggggtcagagcacggcgtggggatctacgtgtcgctggtggagccgggctcatcg
gccgagagggaaggactgaggatcggggaccagatagtagcagcgaacgactcggtgttt
gactctgtctctcacacagaggcggtgaaggtgttgaagggatgtaagaagctgaccatg
tcagtgtgctcaatgggtcgcatcccaggaggctacatgaccaaccgagtgtacagctgg
ctggaccctcagggccggagtgtgtctccaccacctgatagccaggaggccgacctgaga
caaggacacggcatggaggagaggacggtcaacctgaatatggacaacggtcgctctctg
ggtctaatgataaggggtggggctgagtacggactggggatctacatcacaggagtggac
cctggatctgctgctcatgttggtgaactcaaggtgggcgaccaaattctggaggtgaat
ggtcagagctttgtcactatctcccatgatgaggcagttaacatcctcaagtcagggcac
cacctactaatgaggttgagggatgtgggccgtctgcctcatgcacgtacaattgtggat
gagaccaaatggatctgtggtcaggtcatcgctgagaccaatgcaacatctggcctaaat
tctgtctcacatcctagtgttggtgctgttggtcattcaagcatcagtgccagtggcaac
aatacaagaccgtcatctgccagagccacacctgtatttggaaagtcggcagggtacaga
ggggttagcccacctggtgctcaggtgtctctggagcaacaggcctacatgctgctgaca
gaacaggagaggcagaccatggcctactatctgcaggagtatcagcaaggacacatcaat
gtggagccattgaccatggctctttctgagcttttcaacacccatgcaaagttgtccttg
ttgtctgaggtcaggagtctagtggctcctcaggatctggaggtgtatgacaggctggtg
ttgcaccatcaaagagaggctcatcaggcctggcaaggaggtctcagagtgctacatcca
tcaggccattgcagccatgcagctctggtgatacatgatgcaggacagatcagccatcca
gtggctgaagcttccactggcaactggatagaaaaagaacaagaaaagaacaggaatggc
ttccgaaacatttcactggatgaagcgaggtcttctcctccacctttcagggctgcacct
gtccaggcccagaatattcaaaccagagacaaagagctcagtcagcggcctgcagcccgg
ctgctgcagcccagttccagtgtaccccttcctggtcccactcgcctgcttcaagaatgc
ttccacaagtcactaaagtccttccctacgtcccagcagcccttctcaacatctgcccag
catacatgtgctgctacaaaacatcatacatctctcagtacactccaacatacctgccag
agcacccctcacctctctggctcagaacaatacacccattcacacttcactcagcatact
ggccacttcaaccggctcacttcaggacaccaaacatgtccgggcttcctgcaccatcgg
gactgctccatatttgttcaaccagaggcagcagtaaaactttcttcgcggtcaagctca
tatgaaaagtcatctgttttttcaaagtctgcctcctcctctaaagaagcatctccaatg
ccatcacctcatccatcaccgcgtccttcgccgtgtccttccccatgtccctctcacatg
atacctgcctctctatcatgtagtccagaccggccatgctcacctgccctcacccacaaa
atcattgttacagacatgaaccggctgtctgcagactccagacaacagcaaagaggtgcc
ctgtctcagttgtcagacagtggtcagactctgagtgaagacagcggtgtagatatagga
gagaccggcggtctaactaaggatggcagcccaagaccaaccaagaataagcagggccat
ctggaactccaaggggcccacacgcatcctacaggggccacaagacaacagacaagctca
cctatttcagcactcaacactgccttagtcagagtggtgaaaaattccaacacgttgggc
attgctatagagggaggagcgaatacaagacaacctttgcctcgcattgtgaccattcag
aaaggaggctcagctcataactgtggccagctgaaggttggccaggtcatcctagaagtc
aacggaatttccctgagaggacaggaacatgaagagatcgcccgaatcattgctgaagct
ttcaagaccaaagagagggaccacatcgacttcctggtggctgagctagggttctag
DBGET
integrated database retrieval system
