Xiphophorus maculatus (southern platyfish): 102233697
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Entry
102233697 CDS
T02923
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04136
Autophagy - other
xma04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102233697 (atg13)
04136 Autophagy - other
102233697 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xma04131
]
102233697 (atg13)
03029 Mitochondrial biogenesis [BR:
xma03029
]
102233697 (atg13)
Membrane trafficking [BR:
xma04131
]
Autophagy
Autophagosome formation proteins
ULK complex
102233697 (atg13)
Atg1 complex
102233697 (atg13)
Mitochondrial biogenesis [BR:
xma03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
102233697 (atg13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
102233697
NCBI-ProteinID:
XP_005811432
Ensembl:
ENSXMAG00000004349
UniProt:
M3ZQ74
LinkDB
All DBs
Position
24:complement(5752064..5758696)
Genome browser
AA seq
538 aa
AA seq
DB search
MDGDLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYNR
LSVLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGEVQLGGLGEGFQTVRVGVVGTPV
GTVTLSCAYRTNLAFMSSRQFERSAPIMGIIVDHFVDAPCGNQRPITMGQPCNFRAPDED
DGRAFAGVQDSQEVCTTSFSTSPPSQCVCTLSPSPSKLSKPLPLDSLQLPLAPGLVTHNL
YASRFSYQPAPTGGAAEFNVIQVKEGGNVLVPAQPQPQPQPPHGADVHLTVENAPNTPSS
SGDEDGLLQSGEGRREDGRRSVSPSDPVESLSAFTRKVGAFVNKPNTQITAASLDLPFAA
FAPRGLDSEENDPMVRPPDSPPSQSPLQASLHSQGSDGSGPQDDFVMVDFRPAFSKDDLL
PMDLGTFYREFQNPPQLASLSLHTSSQSMADDLDSLPEKLRVYEKNIDEFDAFVDMLQ
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggacggtgacctgagtccacaggataagaaagacttggacaagttcatcaagtttttt
gccttaaagactgttcaggtgatcgttcaagctcgtctgggggagaagatctgcactcgc
tcgtcttcgtcacccactggctcagactggtttaatttggccatcaaagacatcccagag
gtcactcatgaggccaagaaggcgctggccggccaacttccaggcatcggccgatccatg
tgtgtggagatctccctaaagacctcagagggagactccatggagttagagacttggtgc
ctggagatgaatgagaagtgcgataaggacattaaagtgtcgtacactgtctataaccgg
ctgtctgtcctcctaaaatctctgctggccatcaccagagtgactcccgcctataagctg
tccagaaagcagggccacgactacgtcatattatacaggatctactttggggaagtccag
ctgggtggattaggagaaggtttccaaacggtgcgcgtcggtgttgtcggcaccccggtc
ggcacggtaacactgtcatgtgcctaccgcaccaacctggcgttcatgtccagcaggcag
tttgaacggtcggctcccatcatggggatcatcgtggatcactttgtggacgcgccctgc
ggcaatcagcgtccaatcacaatggggcagccctgcaacttcagagccccagatgaggac
gacggcagagcatttgctggagttcaggactctcaggaggtctgcaccacctccttctcc
acctcccctccctctcagtgtgtctgcactctgagtccgtccccttccaaactgtccaag
cccctcccactggacagtctccagctcccattggctccaggacttgtcactcacaatctc
tatgcttccaggttctcctaccagcctgcacctacaggcggagctgctgagttcaacgta
atccaggttaaagaaggcgggaacgttctggttccggctcagcctcagcctcagcctcag
cctcctcatggagcggatgtccatctgacggtagaaaacgctccaaacacaccgagcagc
agtggcgatgaagacggcctgctgcagagtggtgagggaagaagggaggatgggaggagg
agcgtctctccctccgacccagtggagtcactcagcgcgttcacaaggaaggttggggct
tttgtgaataaacccaacactcagataacagctgccagtctggacctcccattcgctgca
tttgctcctcgtggcctggactctgaggagaacgatcccatggtgcgtcctccggactct
cctccctctcagtcgcccctgcaggccagccttcactctcagggctcggacggatcggga
ccgcaggacgacttcgtcatggtcgactttcgtccagctttctctaaagacgaccttttg
ccaatggatctgggcactttctatcgagagtttcagaaccctccacagctggccagcctc
tcgctgcacaccagctcccagtcgatggctgacgacctggactctctgccagagaaactg
cgcgtgtacgagaagaacattgacgaatttgacgcgtttgtggacatgcttcagtag
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