Xiphophorus maculatus (southern platyfish): 102233698
Help
Entry
102233698 CDS
T02923
Symbol
uimc1
Name
(RefSeq) BRCA1-A complex subunit RAP80 isoform X1
KO
K20775
BRCA1-A complex subunit RAP80
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102233698 (uimc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xma03400
]
102233698 (uimc1)
DNA repair and recombination proteins [BR:
xma03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
102233698 (uimc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAP80_UIM
Motif
Other DBs
NCBI-GeneID:
102233698
NCBI-ProteinID:
XP_023198666
Ensembl:
ENSXMAG00000015045
LinkDB
All DBs
Position
11:9125752..9138881
Genome browser
AA seq
989 aa
AA seq
DB search
MRERGRHSSSPSSATQQQSRMALRKKLAQNVSSDSQQDANTQEDIASTDTESRDEFSSSL
RSTSLAREKRRRERKNHSRRKEMTEDEEMDLALQLSKQEASNTALRQQQEDENVMKAIQE
SMVNQTQPGLKSPNKHLLDDVPQSTGSRRKLSYSNGEMMPEEGGMNSGAFGPGDEIITRR
KKRRKQAGSPLMGIPELSQTQKVSSENSPSITEPVSAHLDSPQSSDSTDIEDSQLQMSPV
FPLTGCRADVHVSRLNLDVVEACKSSGFVLYSQDSLISTQKSAQPRSPVFPQSNPIFCPK
SPVFPGDDMGREGHLEQSPTFVKSPVFGRTADCSNHPACENIELSFSSQESSNPTVRSGS
PQSPVFHKSPSGQSSFCKDPRRGQVERRDERSTSPAELQRTDQQLRASGRDQSPSGCRKD
IKSGGCPTAECNRHSPKSEEVNENCEGWTSAETELTSDMTLIWSEQEEDDITPVGSLSPV
FPEEKAAVPADNQLGSSPNHVLTASQESFGPDCSLKPQKCSSQPPTSALHPVSRQEEVRR
ASPQRGEPSDRQTIHYYWGVPFCPRGLDPDTYTKVIMAQMEVYEKSLKEAQRGLLRKAEW
GEAIQSEPQNSIPPEASAGSPQPCVSRRRGLRLRGSKRSEVADFLPEEEEERKDEGEEEQ
QEEEGNKESDEGQMDTDDCEVCPETQLSDNNSTKDLSLGADAETQVSPLLEPSQKDPELP
EIKMILRDDSPIRDESQEPEPNMKNSKIEENISGHGEDAGGQTARRVKKVKSRKNPEVEK
MEDRSLQRSECLELEASIIPHSPEASVDCPICQGSFLVSEIEMHAAYCDGEVAMVDQRRP
ESQGFQDLLKPRRKRMKRTEVVWEETTQPSDICRNQEKCYICQKSVPLRDYSRHTELCLQ
RGTVSRRGSLLSALEKTESKDSGAGTSGAKPQPEAVIDLRDDDEEDEEVSAYRISNSPIR
SFTPISEATGCLIDFRKQQRPKKPSQKRR
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgagagaaagaggaagacactcttcatcaccgtcgtcagcgactcagcagcagagcagg
atggctctgaggaagaagctggctcagaacgtttcctctgatagccaacaggatgcaaac
acccaggaggacatagcttctaccgacacagaaagcagggatgagttctcgtcttcgctt
cggtcaacatcattagcacgagagaaacgccgaagggagaggaagaaccactccagacga
aaagagatgactgaggatgaggagatggacctggcgctacaactcagcaaacaggaagcc
agcaacacagcactgagacagcagcaggaggatgagaatgtgatgaaggccattcaggaa
agcatggtcaaccagacacaacctggtctgaagtctccaaataaacatctgcttgatgac
gtcccccagagcaccggctctcgacgaaaactctcatactctaacggggagatgatgcca
gaggagggtggcatgaactcaggagcttttggaccaggagatgaaattattaccaggaga
aagaagcggagaaaacaagctggcagtcctctaatgggaataccagaattgtcacagact
cagaaagtttcctctgagaattctcccagtatcacagaaccggtctccgctcatctggac
tctccgcagagctccgactcaacagatattgaagactcccagctccagatgtctccagtc
ttcccgctgaccggctgcagagcggatgttcatgtcagtcgcctcaacctggatgtagtg
gaagcctgcaagagctctgggtttgtcttgtattctcaggacagtttgatttccactcaa
aaatctgctcagcccagaagccccgtgttcccccagagtaaccccatattctgtcccaaa
agtcctgtgttcccaggagatgacatgggccgtgaaggacacctggagcagagccccaca
tttgttaagagtccagtttttggcaggactgctgactgctctaatcatcctgcctgtgaa
aatatagagctcagcttctcctctcaggagagttcaaatcccactgtgaggtctggctcc
ccccagagccctgtgttccataaaagcccctcaggacagtcttcattctgtaaagatccc
cgccgagggcaggtggagcggagagatgagcggtcaacaagccccgctgaactgcaaagg
accgaccagcagctccgagcttctggccgtgaccagagtccttctggctgcaggaaggac
ataaagtctggcggctgtccaactgccgagtgcaacagacattcgccgaagtcagaagag
gtgaatgaaaactgcgaaggctggacttctgcagagacggagctgacaagcgacatgacg
ctgatctggtcagaacaggaggaagatgatattacgcccgttggttctctcagcccagtc
ttccctgaggagaaagctgctgttccagcagacaatcagttgggatcatccccgaatcat
gtattgacggcttcccaagaatcgttcgggccagactgcagcctgaaaccccagaaatgt
tcgtcacagccacccacctcggccttgcatcctgtgagcagacaggaggaggtccgcagg
gcgtcgccccagcgtggggagccttcagacagacagaccatccactactactggggggtt
cccttctgtccaagaggcctggacccagacacgtacaccaaggtgatcatggctcagatg
gaggtttatgagaagagtctgaaagaggctcaaaggggtctgctgaggaaggctgagtgg
ggggaggccatccagtcggagccacagaattccataccccctgaagcatcagctggatca
cctcagccttgtgtttctcgaaggagaggtctaagactgagaggcagcaaaaggagcgaa
gttgctgattttcttccagaagaggaagaggagagaaaagatgaaggagaagaggagcag
caagaggaagaggggaacaaggagagtgatgaagggcagatggacactgatgactgtgag
gtttgtccagaaactcaactgagtgacaacaacagcacaaaagacctgagcttgggtgct
gatgctgaaacacaggtcagccctctgctagaaccttcacagaaagatcctgagctgcct
gagatcaagatgatcctcagagatgattctccgatcagagacgagtctcaggagccagag
ccaaatatgaaaaactcaaaaatagaggaaaacatctcaggtcacggcgaagatgccgga
ggacagactgcacgaagggtaaagaaagtcaagagcagaaagaatccagaggtggagaag
atggaggaccgaagtcttcagagatcagaatgtcttgaactggaagcatccatcatccct
cacagccctgaagcctctgtcgactgtcccatctgtcagggatcgtttctcgtgagtgag
attgagatgcatgcggcgtactgtgatggagaggtggccatggtcgaccagaggaggcct
gaaagtcaaggttttcaagatttactgaaacctcgtaggaagagaatgaagagaacagag
gtggtatgggaggaaaccacccaaccctctgatatttgcagaaaccaggagaaatgctac
atctgtcagaaatctgttcctctaagagattacagccgacatacagagctctgccttcag
cgtgggacagtgagcaggaggggaagtctgttgtcggctctggagaaaacagaaagcaag
gactcaggtgctggaacatcaggagccaaaccccaacctgaagcagttatcgatctgcgg
gacgatgatgaggaggatgaggaggtttcagcgtacagaatcagtaactctcccatcaga
tccttcactcccatctctgaggccacaggatgccttattgacttcaggaaacagcagcga
cccaagaagccgagtcaaaaacgaagatga
DBGET
integrated database retrieval system
