Xiphophorus maculatus (southern platyfish): 102233778
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Entry
102233778 CDS
T02923
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xma03019
]
102233778
Messenger RNA biogenesis [BR:
xma03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
102233778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
102233778
NCBI-ProteinID:
XP_005808042
Ensembl:
ENSXMAG00000012354
UniProt:
A0A3B5R3X2
LinkDB
All DBs
Position
24:complement(6288154..6298690)
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AA seq
931 aa
AA seq
DB search
MGQKDHVEAGAVLDLAPDLEYLHVAGADRQAGGLEGPPAMEEQAESFATTTTAVCSPPEE
SGGSDGECKTAPPATADSDGGEVSYTSSKNTHQPLCRTPCVDLGTEGPPEPPSDPSGEPE
REPAEPPADCPAPEPEPKLAGKDYQAKLEFALKLGYSEETVRQVLSKLGPDTLINDILGE
LVKLGTKPDSEQPAGILTSTSSSSSSSSCGCSDVLDGQRSDSPLPTESVCDQDNLRPIVV
DGSNVAMSHGNKEVFSCQGIQLAVDWFVERGHQEITVFVPAWRKEQSRPDAPITDQEILR
RLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAYESDGIIVSNDNYRDLANEKPEWKKFI
DERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKRPILPEQKKQPCPYGKKCTYGHKCKY
YHPERGAQPQRAVADELRASAKSCVPSKNQGDAGLVKSHSVPAGTIEAKNGAPKRQSDPS
IRALSYSDAEEKLLVKSRLESQKSNIGGSSSSSSSSNISCSGGLAVSSALAGPSPGFGLL
QDQQSRSGTHLPAPSHDLYPHCETPDLSYYSVTRAYSGLSLSSRRSPDCRYPNDPELRLG
SMGSTGSECGSESSISCGSSDSYSDRSCPGCPPEPLLEESVHLPNPSGRLYAHHIASNHE
LCGLHAADYPSIQHNHTSNPAVHSYHLNAACGQSCVHEQPPPEGPPKRPLYPLPPHLQHQ
PLAARSSCPGDYHSLPQSNRQPPGSPIGRCLAPTRSESVSDSHLYEHLSASHHHHRPKTL
PSWETYYRQPSLPPSRYEPSAYQSLPDTHQSSWHPAPWPHEGYSSSHPALHPSPTRYLGH
PPPPALSPHPPYPPHSSHLALLSHPPPPYGPQHPDSPVHCRYEDVREKVYVDLCNIFPLE
LVRRVMARSPHVTDPQQLAAAILAEKAQSGY
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgggccagaaggaccatgtggaggcgggagcagtcctcgacctggcgccagacctggag
tatctccacgtagcaggggccgaccggcaggctggcggccttgaaggaccccctgctatg
gaggagcaggcggagagcttcgccaccaccaccactgctgtttgttcccctccggaggag
agcggtgggtctgatggcgagtgcaagacggcgccgccggccacagcagactcagacgga
ggagaggtcagctacacttccagtaaaaacacccaccagccgctgtgccgcacgccatgt
gtagatctgggcacggaggggcctccggagcctccgtcggatccctcaggagaaccggag
cgggaaccggccgagcctccggccgactgccccgcaccagaaccagagcccaagctggcg
gggaaggactaccaggcgaagctggagtttgccttgaagctgggttactctgaagagact
gtgcgccaggtgctgtccaagctcggacccgacaccctcatcaacgacatactgggcgaa
ttggtcaaactgggcaccaaacctgacagcgagcagccagcgggaatattgacttctacc
tcatcgtcttcatcatcctcgtcttgtggctgctctgatgtgctagatgggcagagatcg
gactctccactacccacggagtctgtctgtgaccaggacaacctgcgaccgatcgtggtg
gacggcagcaacgtggccatgagtcatggaaacaaggaggtgttttcctgtcagggcatc
cagctggctgtagactggtttgtggagcgcggccatcaggaaatcacggtttttgtgcct
gcttggaggaaagagcagtcccgccctgatgctccaataacagatcaggagatcctgcgg
cgcctcgagaaagaaaagatcctggtcttcaccccctcacggcgcgtccaaggccggcgc
gtggtctgttatgacgatcgcttcatcgtcaagctggcttatgagtcagatggcatcatc
gtctccaatgacaactacagagacctggctaatgaaaagcctgagtggaaaaagttcata
gacgagcggctgctcatgtattcctttgtcaatgacaaatttatgcctccagatgatcct
ctcggacgtcacggccccagcctggacaacttcttgaggaaaaggccaatcctgcctgag
cagaagaaacaaccctgtccatatgggaaaaagtgcacgtatggccacaagtgcaagtac
taccaccctgagagaggagctcagcctcagcgcgccgtggccgatgagttgcgtgccagt
gccaagagttgcgtcccctccaagaaccagggggatgctggactggtgaagagccacagt
gtgccagctggcaccatcgaggcaaaaaacggtgccccaaaaaggcaatcggatcccagc
atccgagctctgtcgtacagtgacgctgaggagaagctactagtgaaaagtagactagaa
agccagaagagcaacataggtgggagcagcagtagcagttctagtagcaacatcagctgt
agcggaggtttagctgtttcttcagccctggcaggaccgtcacctggttttggtcttttg
caagaccaacagtccagatcagggacacatctaccggcccccagccatgatctctaccct
cactgtgagactccagacttaagctactactctgtgacacgggcctactctggtctgagc
ctctcctcccgacgaagcccggactgccgctaccccaacgatccggagctgcggctcggc
tcgatgggctccacaggttctgaatgtgggagtgaaagcagcatcagttgtggtagcagt
gactcatatagtgaccgatcctgtcccggatgccccccagaacctttattagaagaaagc
gttcatttgcccaacccctctggccgcctgtacgctcatcacatcgcttctaaccatgag
ctgtgcggtctgcatgcggcagattacccaagcatccaacacaaccacacctctaatcca
gccgttcattcctaccatctgaatgctgcgtgtgggcagagctgtgttcatgagcagcct
ccaccagagggaccccctaagcgacccctttaccctctgcctcctcacctccaacaccag
ccgctagctgcccgctccagctgccccggcgactaccactctctgcctcagtccaaccgt
cagccccctggatctcccattggccgctgcctggcccccactcgcagtgaaagtgtgtcc
gactcgcatctgtatgaacatctctctgcgtctcaccaccaccatcgaccgaaaacgctg
cccagctgggagacttattacagacagccgtcactcccaccatcaaggtatgagccgtca
gcctaccagagtctgcctgacacgcatcagtcgtcctggcaccccgcaccgtggcctcac
gagggctacagctcgtctcacccagctctgcacccgtccccgacacgttacctaggccac
ccgccgccaccagccctctcaccccaccctccttacccgcctcacagctcccatctcgct
cttctgtcacaccctcctcctccgtacgggccgcagcacccggactcccccgtgcactgc
cgctatgaagacgtgagggagaaggtgtacgtcgacctttgcaacatcttccccttggag
ctggtgaggcgtgtgatggctaggagcccccatgtcacggacccccagcagctggctgcc
gccatcttggcagagaaagcgcaaagtggctactga
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