Xiphophorus maculatus (southern platyfish): 102233837
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Entry
102233837 CDS
T02923
Symbol
rrp12
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xma03009
]
102233837 (rrp12)
Ribosome biogenesis [BR:
xma03009
]
Eukaryotic type
90S particles
Other 90S particles
102233837 (rrp12)
Pre-60S particles
Other pre-60S particles
102233837 (rrp12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
HEAT_GCN1
MNE1
Motif
Other DBs
NCBI-GeneID:
102233837
NCBI-ProteinID:
XP_014324769
Ensembl:
ENSXMAG00000013498
UniProt:
M4AGH0
LinkDB
All DBs
Position
22:complement(13226228..13238360)
Genome browser
AA seq
1290 aa
AA seq
DB search
MVKSGKLRSGTGVKLKRWKKGHSSDSNPQTSRFRQAAKSRFFSRPSAKSDLTVDALKLHN
ELQAGPLELNAEARKDTQMEEEPDERLSERTSGTFLSGLSDCSNLTFRKVQRFWESNSAA
HKEICAVLAAVTEVIRSQGGKETETEYFAALMTTLEVVESEESQTAVAYLLNLVMKRVPA
PVLKSKFSDTTKALMDIMSKQVSSDASSALRWILSCLATLLRKQDVSVWSYPSTLQAYHG
LLSFTVHSKPKVRKAAQQGVCSILRGSDFLFADDAPSHHPAAVTTAKFCIKEIEQAGGSK
EDTTTLHVLCLLKELMGSFPLGAVKSCCETLLRVMTLSHVMVTASAMQAFHRLFIAKPNS
SSLSAELNAQIITALYDYLPSENDLQPLLAWLTVMEKAHVHLASLQSSLSLGHLPRLFSA
TMSCLLSPHTQVVSAATNTLKSLLTECVAPHMEEMGMITATASAGNPSYVCKMFRIVEEG
LSYRFHASWPFVLQILGCFYRAAGKQAHPIMTKSLQSLSDLRSVPQFSFSGELDLAVGGA
VESMGPEVVLAAVPLNITGYNDDLEFPRSWLVPVIRDHVKNTRLGFFASYFLPLATTLKQ
RAEELEQEGKKLEAKVYQTLQLQIWTMLPGFCTCPVDLTASFKGVARTLGMAINERPDLR
LTVCQALRTLINKSCSTVEEKAELGRFSKNFLPILFNLYSQQPADGDSGTYRMAVLDTIK
VYLTVTDMQLICTLLQKASDRLTSTESVEFTRLAVMDLVVAMAPFVDESTMAKTFELIRP
YMEAKEPGMQKKAYRVLEEMCGAERDECKSFVLSNLETLKTVLLDTLKNASSPAKRPRLK
CLIHIVKRLNEEHKGFITALLPEVIICTKEVSVGARKNAYSLLVEIGNAFVRFCGNKKDA
MEEYLALVYAGLTGSVTMITCTILALTRLVFEYKDSIDVSTMEQLLQNVCLLLSSRTREV
VKAALGFIKVILFIMDPKALGSHVTLMMEGVGNIKDDVRRHFRTKLKNIFTKFIRKFGFE
LVKSMLPAEHHKVLTNIRKAEARNKRRKQVAEEQDASSESEEETSKGKSESIEDILAESD
GDLSEDEGKSRNTQKKSSKQKGKAWLKEGEGDDPLNFLDPKVSQRVLATNPQLKKITKVE
HGFKVTSDGRLIIREDDEDDRKNKGGEEMNDILEEAGVKSKKSQKRKFQDDNLDEDMDVE
PQLKYKAGGSGIHRPLGRRQDVGSDYKSKKGKGDVKKKGKVDPYAYIPLKKDQLNRRKRA
KLHGQFKGMVRGVQKGAQSGKKMQKKKRKS
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaatcagggaaacttcggtcggggaccggggtcaagttgaagcgctggaagaaa
ggacacagcagcgactccaatccgcagaccagccggttccgacaggcggcgaaaagccgc
tttttcagcagacccagcgcgaagagtgacctgactgttgatgctctcaagcttcacaat
gagctgcaggctgggcccctggagcttaatgcagaggcccgtaaggatacgcaaatggaa
gaagagcctgatgagagactgtcggagagaacatcgggcaccttcctgagtggcctgtcc
gattgttccaacctcacattcagaaaggtgcagcgcttctgggagtccaactccgctgca
cataaagagatttgtgcagttttagctgctgttactgaagtgatccgaagtcaaggcggg
aaggaaacagagacggagtactttgctgctttaatgacgaccttggaagttgtggaatca
gaagaatctcagactgcagtggcttatcttctcaaccttgtcatgaaacgtgttccagct
ccagtgcttaagtccaagttctcagacaccaccaaggctctcatggacatcatgtctaaa
caagtttcatctgatgcatcttcagctctcagatggatcttgtcctgcttggccactttg
ttgaggaagcaggatgtttctgtctggagctacccatctactctgcaggcttatcatggt
ctgctcagcttcacggtgcacagcaagccaaaggtccgtaaagcagctcagcaaggcgtt
tgctccattcttcgaggcagcgacttcctctttgctgatgatgctccaagccatcacccc
gctgctgtcactacagccaagttttgcatcaaagaaatagagcaggcaggaggtagcaaa
gaggacaccaccaccctccatgtgctctgcctcctgaaggagctgatgggatcgtttcct
ctgggagccgttaagtcctgctgtgaaactctgctgcgtgtcatgactctcagccatgtg
atggtaacagccagcgccatgcaggcgtttcatcggctcttcattgcaaagccgaattca
tcgtccctctctgcagaactcaatgcccagatcatcacggctctctatgactaccttccc
agtgagaatgacctgcagcctctgctagcctggcttaccgtcatggagaaagcacatgtt
cacctggcaagtttgcagagttctctgagtttaggtcacctccctcggctgttctctgct
accatgtcctgcctgctgtcgccgcacacacaggtggtctctgcagccaccaacacactt
aagagtttgttgactgagtgtgttgctcctcacatggaggaaatggggatgatcactgcc
accgcctctgcagggaacccctcatatgtctgtaaaatgtttcgcattgtggaggaagga
ttatcctatcgctttcatgcctcgtggccctttgtgctgcagatccttggttgcttttac
agagctgcaggaaaacaagctcaccctatcatgactaagtccctgcagtccctgtcagac
ctgcgctccgtccctcaattctccttcagcggggagttggacctggctgtgggaggcgct
gtggaaagtatggggcctgaagtggtgctggccgctgtgcctctcaacatcaccggctac
aatgatgacttggagttccctcgcagctggttggttccagtcatccgagatcacgtgaaa
aacactcgcctcggtttttttgcttcttattttctccctttggccactacactcaagcaa
agagctgaagagttggagcaagaaggaaagaagctggaagcaaaagtctaccagacatta
cagcttcagatttggaccatgcttcctggcttctgcacatgtccagtggacctgacggcg
tccttcaagggcgtcgcccggacgctcggcatggccattaacgaacggccagacctgcgc
ctcaccgtgtgccaagctctgcgtacgctgatcaacaagagctgctccacagtggaagaa
aaggcagaattgggacggttctccaaaaacttcctgcccatccttttcaacctgtacagc
cagcagcctgcagacggggactctggtacttacaggatggctgtgctggacaccatcaaa
gtctacttaactgtcactgatatgcagctgatctgcacattgctgcaaaaagcctctgac
cggctgaccagcacggagagcgttgagttcacacggcttgcagtgatggaccttgtggtt
gccatggctcccttcgttgatgaaagcactatggccaaaacgtttgagctcataagacca
tatatggaggccaaagagccgggcatgcagaagaaggcataccgcgtgttggaggagatg
tgcggagcagagagagacgagtgtaaatcctttgtcctgtccaacctggaaactctgaaa
actgtcctgcttgacactcttaaaaatgcttcgtctcccgcaaagaggccgagactcaag
tgtcttatccatatcgtgaaaaggttgaatgaggagcacaagggcttcatcactgcgctg
ctgccggaggtgatcatctgtaccaaggaggtttctgttggagctcgtaagaacgcctac
agtcttctggtggaaataggaaacgcttttgttcgcttctgtgggaacaaaaaagatgcg
atggaggagtatttggctctggtgtatgcaggactcaccggatccgtcaccatgatcact
tgcaccattttggcattgactcgtcttgtgtttgagtacaaagactcgatagacgtttcc
accatggagcagctgctgcaaaacgtctgtctgctgctttcgtctcgaaccagggaggtc
gtcaaagcggctttgggcttcatcaaagtcatcctgtttatcatggaccccaaagctttg
ggctcacacgttacccttatgatggagggagttggaaacatcaaggatgatgtaagaagg
catttcagaaccaaactcaagaacatcttcactaaatttatccgaaagtttggctttgag
ctggtgaagagcatgctgcctgcagagcaccacaaggtgctgacaaacatccgcaaagcc
gaggcccgaaacaagaggcggaagcaggtcgcagaggagcaggacgcatcgtcagagagc
gaagaggagacgtctaaaggaaaaagcgaaagtattgaagacatcctggctgagtctgac
ggtgatttgtctgaggatgaagggaagtctcgtaacacccagaagaaatcaagcaaacag
aaagggaaagcgtggctgaaggagggagagggagatgatcctttgaacttcttggatcca
aaggtttcacaaagagttctagccacaaatccacagctgaagaagatcaccaaggtcgaa
cacggcttcaaggtgacctcagacggacggctcatcatcagagaggatgacgaggacgat
aggaaaaataaaggtggagaagagatgaatgatatcctggaggaagcaggagtgaaatct
aaaaaatcccagaagagaaagtttcaagatgacaatttagacgaggacatggatgttgaa
cctcaattgaaatataaagccggcggctcgggtatccatagacctctgggacgaaggcaa
gatgttggatccgattataaatcaaagaaaggaaaaggagatgtgaagaaaaaaggaaag
gtggatccttacgcttacatccctctgaagaaggaccagctcaatcgcaggaagcgagcc
aaactgcacggtcagttcaaaggcatggtgagaggtgtccagaagggggcgcagtctgga
aagaaaatgcagaagaaaaaaaggaaatcctga
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