Xiphophorus maculatus (southern platyfish): 102233852
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Entry
102233852 CDS
T02923
Symbol
lrfn5
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xma04990
]
102233852 (lrfn5)
Domain-containing proteins not elsewhere classified [BR:
xma04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
102233852 (lrfn5)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
I-set
Ig_3
LRR_4
LRR_1
ig
LRR_9
Ig_2
fn3
C2-set_2
DHU1_N
Motif
Other DBs
NCBI-GeneID:
102233852
NCBI-ProteinID:
XP_023208825
Ensembl:
ENSXMAG00000001651
LinkDB
All DBs
Position
19:complement(1039409..1131637)
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AA seq
849 aa
AA seq
DB search
MLTMERLLLCVILAVSMAVRAQICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRHTVEL
RLADNFVTSVKRKDFANMTRLVDLTLSRNTISYITPHAFTDLENLRALHLNSNRLTRIGN
DTFSGMSKLHHLILNNNQLVLIHQGAFNDLLALEELDLSYNNLDSIPWEAIQRMTSLHTL
SLDHNMLEYIPEGTFSLLQKLNRLDVTSNKLQKLPPDPLFQRAQVLATSGEMTPSSFALS
FGGNPLHCNCELLWLRRLKREDDLETCATPEHLAGRYFWSISEEEFLCEPPLITRFSHEM
RVLEGQRVALRCKARGDPEPAIHWISPEGKLVSNSSRTLVYSNGTLDILISTVKDTGSFT
CISSNPAGEAHQTVELVIIKLPHISNNTNNIQEPDPGSSDISTSARGGANGSNVTGDVKG
GVDKRVVTAEARSSTALIKFNFQRNIPGIRMFQIQYNGSQDDSLVYRMIPPSSENFLVNN
LAAGTQYDLCVLAIYDDVITSLTATRVVGCVQFTTESEYMRCHFMQSQFLGGTMIIIIGG
IIVASVLVFIIILMIRYKVCNPGEGGKGVSLSMTNVHSQTNGQQSHGCTVTPSSSKHGSV
GLDDLSAGSKKKSGAAAAGPGEKDTLTQSSECSLPDCSTATSVLSQSWTAGGEDRDKVAE
QRPLTGVGSPTAASGSLHKSKRKPAPVQPENRPPPSSPRPPPSSTPSSAPLENLNTNRNN
STSLNKTPPPPFVPSPFSGPLLAPSPVPSMRFRETPVLRRAPRAVSSSAKYQTLPTEEGG
RSRARRRYSLSEEGAKTQSPHQRAGGAKLGRVVRNKRSQSMSGMLLSKEEDGDSEKGRSE
SDWILESTV
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgctaaccatggagaggctgttgctctgcgtgatcctggcggtttccatggcggtgcgg
gcacagatctgtccgaagcgctgcgtctgccagatcctgtcaccgaacctggcgacgctc
tgcgccaagaagggtctgctgtttgtgccgccaaacatcgacaggcacacggtggagctg
cggctggccgacaacttcgtcacaagcgtgaaaaggaaagactttgcaaacatgacgcgg
ctggtggacctgacattatccagaaacaccatctcatacatcacacctcatgcctttaca
gatttagaaaatctccgagcgcttcacctcaacagtaaccgtctgacgaggataggcaac
gacacgttcagcgggatgtcaaagcttcaccacctgatcctcaacaacaaccagctggtt
ctgatccatcagggagcgttcaacgacctgctggcgctggaggagctggacctcagctac
aataacctggactctattccctgggaggccattcagagaatgacgagccttcatacgctg
agcttagaccacaacatgctggaatacattccagaaggaaccttttcccttctgcagaaa
ctcaaccggctggacgtcacctccaataaactgcagaagctcccaccagaccccctgttt
cagcgggcgcaggttctagccacatcaggggagatgactccctcgtcgttcgcgctgtcg
tttggaggaaatcctctccactgtaactgtgagttactgtggctgaggaggctgaagagg
gaggacgacctggagacctgcgccacgcctgagcacctggccggccggtacttctggtcc
atctctgaggaggagttcctctgtgagccgccgctcatcaccagattctcccatgagatg
agagtcctggaaggacagagagtcgctctcaggtgtaaggcaagaggcgatccagaacca
gccattcactggatctctcctgaaggcaaactggtgtccaactcctccagaaccttggtt
tacagcaacgggactctggacatcctcatcagcactgtgaaagacacgggctccttcacc
tgcatctcgtccaacccggccggcgaagcccaccagaccgtggagctggtcataatcaaa
ctgcctcacatctccaacaacaccaacaacatccaagaacccgatccgggttcgtcagac
atttccacgtcggcccgaggcggcgccaacggcagcaacgtgacgggcgacgtgaagggc
ggcgtggacaagcgggtggtgacggccgaggccaggtcgtccaccgcgctcatcaagttc
aacttccagaggaacattcctggcatcaggatgttccagatccagtacaacggcagccag
gatgactcgctggtttacaggatgattcctccatcgagcgagaacttcctggtcaacaac
ctggccgccgggactcagtacgacctgtgtgtcctggccatctatgatgatgtcatcacg
tcgctgacagccacgcgagtggtgggctgcgttcagttcaccaccgagtcggagtacatg
cgctgccacttcatgcagtcccagttcctcggcgggacgatgatcatcatcatcggaggg
ataatcgtcgcctcggtgctcgtcttcatcatcatcctgatgatacgctacaaggtttgt
aaccctggtgaaggtggcaaaggcgtctccctgtcgatgaccaatgttcactcgcagacc
aacgggcagcagtcacatggctgcaccgtcactcccagctcctctaaacacggatcagtt
ggattggatgacttgtctgccggctcaaagaaaaagagcggcgctgcggcggcggggccc
ggggagaaggacacgctcactcagtcgtctgaatgctccctgcccgactgctccacggcc
acgtctgttctgagccagagctggacggctggcggtgaagaccgggacaaagtggccgag
cagagacctctgactggcgtcgggtcgcccaccgccgcctccgggtccctgcacaagtcc
aagaggaagccggctcccgttcagcccgagaaccgcccgccgccctcctctcctcgccct
ccgccctcttccaccccgtcctctgccccgttggagaacctcaacaccaaccgcaacaac
tccaccagtctgaacaaaaccccaccgcctccctttgtgccctcaccgttctccgggccc
ctgttggcccccagcccggttccttccatgcggttcagagaaacgcccgtcctgcgccgg
gctcctcgcgccgtctcctcctctgcaaaataccagactctccctacggaggagggaggc
cggagcagggcgaggaggagatactcgctcagcgaagaaggcgcaaagactcagtcgccc
catcagagggccggaggggcgaagctgggccgcgtggtgcggaacaaacggagccagtcc
atgagcgggatgctgctgtctaaagaagaggacggcgactcggagaaagggcgcagcgag
tcggactggatcttagaaagcacagtttga
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