Xiphophorus maculatus (southern platyfish): 102233939
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Entry
102233939 CDS
T02923
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3-like
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04010
MAPK signaling pathway
xma04260
Cardiac muscle contraction
xma04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102233939
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
102233939
04261 Adrenergic signaling in cardiomyocytes
102233939
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xma04040
]
102233939
Ion channels [BR:
xma04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
102233939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
VWA
dCache_1
VWA_3
VWA_2
MCP-like_PDC_1
VWA_CoxE
WAK_assoc
dCache_2
Motif
Other DBs
NCBI-GeneID:
102233939
NCBI-ProteinID:
XP_023180343
Ensembl:
ENSXMAG00000016944
LinkDB
All DBs
Position
20:18145965..18184768
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AA seq
1145 aa
AA seq
DB search
MEGICRIQVLHTFLLLWIFIGWNVAAVAGSQQGIPLSVVKLWASAFGGEIKSISAKYSGS
QLLQKELWSITAPRPGANSTSEASPPIRATSRLNPKITAACLWEESGGQRGSPRKYGESV
QTAFRKRLQAQNPGLSCPEKYKEPEKSVRVEEIDGVKLVKGLAVKMEEMFQRKAEATRRL
VEAAEEAHHQHEDNPDLQFEYFNAVLINEVGEDEKPVELGGEFLLEPNDHFNNLSVNLSL
SVVQVPTNMYNKDPDIMNGVYWSEALNKVFVENFERDPTLIWQYFGSAKGFFRQYPGVKW
NPDQSISFDCRNRKWYIQAATSPKDVVILVDVSGSMKGLRLTIARQTVSSILDTLGDNDF
FNIIAYNQEIHYVEPCLNGTLVRADTTNKDHFREHLDKLFAKGIGLLGEALTEAFTILND
FNQTGRGSVCSQAIMLVTDGATEMYDDVFEKYNWPDRKVRIFPYLIGRESAFADNMKWMA
CANKGYFSQISTLADVQENVMRYLHVMSRPKVIDHEHDTVWTEAYADSALRGKSGPALTT
TVAMPVFSTKNETKNQGILLGVAGTDIPLQELMKLIPKHMLGIHGYAFAITNNGYILTHP
DLRPLYQEGQRRRKPYYSSVDLSEVEWEDKDDILRNAMVNRRTGTFSMDVKRTVDRGRRV
LKMHNDYYYTDIKGTPFSVGVALSRGHGKYFFRGNVSMDAGLRDLEQPDVALADEWTYCN
TEEKHEHRHLTQIQAIKLFMTGRRTHLKCDRELIQEVLFDAVVTAPLKSYWNSLALNKSE
NPDKGVEIAFLGTRTGLSRTNLFVPTAQNFLTAEDEEGVFNADHFPLWYKRAAEQVPGTF
VYSIPFSTASESVVLASTAIQLLDDRKSPIVAAVGIQMKLEYFQRKFWTACRQCTALDGN
CIISCDSEDINCYLIDNNGFILVTEEKSQTGLFFGEVEGAVMSKLLQMGSFKRINLYDYQ
ALCREYAGSSDSARTLSDPFSMVKWLLTELVIFLLEFNLYSWWNVDLSAKAQRPQGKTMM
VPCDTEYPAFVSERTIKETTGNVDCGGCVSSFVIQQIPSSNLFMVVVDNKCDCGTFDPVT
MDPIEIKYNESLKCDRLKLQKDRKKPESCHPFHPEENAMECGSAGRLSSCLAVNLLTLIA
ATVSR
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atggagggaatctgcaggatccaagtcttgcacacgtttcttcttctctggatcttcatc
ggctggaacgtagcggcggtggcgggatctcagcaaggaatccctctgtcagttgtaaag
ctttgggcctctgcatttggcggagaaatcaaatcaatttctgcgaagtactctggctcc
cagctattacaaaaggagctgtggtccattacggcgccacgtccgggggccaactccact
tctgaggccagtccccccatcagggccaccagcaggctgaaccctaagatcacagctgcc
tgtctttgggaagaaagtggagggcagcgaggaagtcctcgaaaatatggagaaagtgtc
caaacggcgtttaggaagcgtctccaagcccaaaacccaggactctcctgcccagagaaa
tataaagagcccgaaaagtcggtcagagtggaggagattgacggcgtgaagctggttaaa
ggtctggctgtgaagatggaggagatgttccagagaaaagcagaggccaccaggcggctg
gtggaggctgcggaagaagcgcaccatcagcacgaagacaacccagacctgcagttcgag
tacttcaatgctgtgctgatcaacgaagtgggcgaagacgagaaacccgtggagctgggg
ggagagttcctcctggagcccaatgaccatttcaacaacctttcagtcaacctgagcctc
agtgtggtgcaggtgcccaccaacatgtacaataaagatccagatatcatgaatggggtt
tactggtcggaggccttgaacaaggtgtttgtagaaaactttgaaagagatccaacactt
atctggcagtactttggaagtgccaaaggtttcttcagacagtaccccggagtaaagtgg
aatccagaccagtcaatcagcttcgactgcagaaatcggaagtggtacatccaggcagcc
acgtctcctaaggatgtggtgatcctagtggatgttagcgggagcatgaagggtctgagg
ctgaccatcgccagacaaacagtttcctccattttagacacactgggagataatgacttc
ttcaacattattgcttataaccaggagatccactatgtggagccttgtttgaatggtacg
ttggtccgagctgacacaaccaataaagaccatttccgtgaacatctggataagctgttt
gccaaagggattgggctgctgggcgaagctctgaccgaggccttcacaatcctgaatgat
tttaatcagactggacgtggcagcgtgtgcagccaggccatcatgcttgtgacggatgga
gctacggaaatgtatgatgatgtttttgagaagtacaactggccagacagaaaagtgcgc
atattcccctacctgattgggcgagagtctgcatttgcagataacatgaaatggatggct
tgtgccaacaaagggtattttagtcagatctccactctagccgatgtccaggagaatgtg
atgaggtatcttcacgtcatgagccgtccaaaggttatcgatcatgagcacgatacggtg
tggactgaagcgtacgcggacagtgctcttcgcggtaaatcaggtccagctctgacgacg
acagtagcaatgccagtgttcagcacaaagaatgaaacgaagaaccagggtattctgctg
ggagtcgctggcacagacatccctctgcaggagctgatgaagctcatcccaaaacatatg
ttagggatccatggatatgcttttgcaatcacaaataatggctacatcctgacgcatccg
gacctcaggcctttgtatcaggagggacagaggaggaggaagccttattacagcagcgtg
gatctctctgaggtggagtgggaagacaaggacgacatcctacgtaacgccatggtaaac
aggaggacggggactttctctatggacgtgaagaggaccgtggaccgagggaggcgtgtt
ctcaagatgcacaacgactattactacaccgacatcaaaggaactccattcagtgtcgga
gttgctctctcaagaggccacggaaagtatttcttcagaggaaatgtatcgatggatgca
gggctccgtgatctggaacagccagatgtcgccctggcagatgaatggacctactgcaac
acggaggagaagcacgagcaccgccacctgacccagattcaagccataaagctcttcatg
actggccgcagaacacacctcaaatgtgacagagagttgatacaggaggtgttgttcgac
gctgttgtcacggctccactgaagagctactggaacagtctggctctcaacaaatcagag
aacccagacaaaggggtggagattgcatttctgggcacacggactggtctgtccagaaca
aacctgtttgtaccgactgctcaaaatttcctgacagcggaggacgaggagggtgtgttt
aatgctgatcacttccccctgtggtacaagagagcggcagagcaggtcccaggcacattt
gtctactccatccccttcagcacagcttctgagagtgtggtgttggccagcacagcaatt
cagctcctcgatgacaggaagtctccgattgttgctgctgtggggatccaaatgaagctc
gagtattttcagagaaagttctggactgcctgcagacagtgcacagctctggatggaaat
tgtatcattagctgtgatagtgaggacattaactgctacctcattgacaacaatggcttc
attcttgttacggaggaaaaatctcagacagggcttttctttggagaggtggagggcgct
gtcatgagcaaacttctccaaatgggctcctttaaaagaatcaacctctatgattaccaa
gcgctttgcagagagtacgccgggagcagcgacagcgcacgcactttatcagatcctttc
tcaatggttaagtggctcctgacagaacttgtcattttcctgctagaattcaacctgtac
agctggtggaacgtcgacctctcagccaaagctcagaggcctcagggtaaaaccatgatg
gtgccttgcgacacagaatacccagccttcgtctctgaacgcaccattaaggagacaaca
ggcaacgttgactgcggtggttgtgttagttcttttgtcatacagcagattcccagcagc
aacctgttcatggttgtagttgacaacaagtgcgactgcggcacctttgatcctgtaaca
atggatcccatcgagatcaagtacaacgagtcactaaaatgtgacagactaaagctgcag
aaggacaggaaaaagcctgagtcatgtcatcctttccaccctgaggaaaatgccatggag
tgtggctcagccggtcgcctctccagctgcctggctgtaaatctgctgaccctgattgca
gcgaccgtcagcaggtga
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