Xiphophorus maculatus (southern platyfish): 102234278
Help
Entry
102234278 CDS
T02923
Symbol
vcp
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04137
Mitophagy - animal
xma04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102234278 (vcp)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
102234278 (vcp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xma03019
]
102234278 (vcp)
03009 Ribosome biogenesis [BR:
xma03009
]
102234278 (vcp)
04131 Membrane trafficking [BR:
xma04131
]
102234278 (vcp)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xma04147
]
102234278 (vcp)
Messenger RNA biogenesis [BR:
xma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
102234278 (vcp)
Ribosome biogenesis [BR:
xma03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
102234278 (vcp)
Membrane trafficking [BR:
xma04131
]
SNARE
SNARE associated proteins
Others
102234278 (vcp)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
102234278 (vcp)
Exosome [BR:
xma04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
102234278 (vcp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
RNA_helicase
NPHP3_N
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
Sigma54_activat
NACHT
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
Zot
DUF3944
Motif
Other DBs
NCBI-GeneID:
102234278
NCBI-ProteinID:
XP_005804058
Ensembl:
ENSXMAG00000007485
UniProt:
M3ZZ75
LinkDB
All DBs
Position
12:18826821..18836772
Genome browser
AA seq
806 aa
AA seq
DB search
MASGGESKNDDLQTAILKQKSRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLMK
GKKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIRREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFKWALSQSNPSALRETVVEVPNITWDDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRV
INQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRISILKAN
LRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAM
EVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSSAAGG
SGPSHGSGGTGSGPVFNEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgggaggggaatccaaaaatgatgacctacaaactgctattctgaagcaaaag
agcagacccaacagactgattgttgatgaatccatcaatgaagacaacagcgtggtctct
ctttctcaggccaagatggacgaactgcagctcttccgtggcgacacagttctgatgaag
gggaagaagaggcgggagactgtgtgcatcgtgctctcagatgacacctgctctgacgag
aaggtccggatgaacagggtggtccgcaacaacctgagggtccgtcttggtgatgtcatc
agcattcagccttgtcctgatgtgaagtacggaaagaggattcatgtcctccctatagac
gacacagtggagggcattactggcaacctgtttgaagtctacctgaagccatactttctg
gaggcttacagaccgatccgcaaaggtgatattttcctggtcagaggcgggatgagagct
gtggagttcaaggtagtggagaccgatccatccccctactgcatagttgctcctgacaca
gtcattcactgtgagggtgagccaatcagaagagaggatgaggaggagtccctgaatgaa
gtgggctatgatgacattggaggagttaggaagcagttagctcagatcaaagagatggtg
gagctgcctctcagacatcctgcactgttcaaggccattggagtcaagcctccacgtggc
attcttctgtatggaccacccggaactggaaaaaccttgattgctagggctgtggccaac
gaaacaggagctttctttttcctaattaacggccctgagatcatgagtaagctggctgga
gagagtgagagtaacttgagaaaggcctttgaggaagcggagaagaatgctcctgccatc
atctttattgatgaacttgatgcaattgctccaaagagagagaagactcatggagaggtg
gagaggcgcatagtttcccagctgctgactcttatggacggcctgaaacagagagctcat
gtgatcgtcatggcagccaccaacagacccaacagcattgatccagctctcaggagattt
ggacgctttgacagagaagtggacattggcattcccgatgcgactggcaggttggagatt
ctgcagattcacaccaagaacatgaaactagctgacgatgttgacttggaacaggtggcc
aatgagacccacggccacgtcggtgcggatctggctgctctctgctccgaggccgccctg
caggccattaggaagaagatggacctgatcgaccttgaggacgagactattgatgctgaa
gtcatgaattctcttgccgttaccatggacgacttcaagtgggctctgagccagagcaac
ccatcagctctgagggagacggttgttgaggttcccaatatcacctgggacgatattgga
ggtctggaagatgtcaagagggagctgcaggagctggtgcagtaccctgtggagcatcca
gacaagttcctgaagtttggcatgaccccatccaagggtgtgcttttctacggtcctcct
ggttgtggtaagactctgctggccaaagccattgccaatgagtgccaggcaaacttcatc
tccatcaaaggacctgaactgctcaccatgtggtttggagaatctgaggctaatgtcaga
gagatcttcgacaaggctcgtcaggctgctccgtgtgtcctcttcttcgacgagttggac
tccatagctaaggctcgcggcggcaacgttggcgatggcggcggagctgccgaccgtgtg
atcaaccagatcctgaccgagatggacggcatgtcgagcaagaagaacgtcttcatcatc
ggcgccaccaacagaccagacatcatcgacccggccatcctgagacctggccgtctggat
cagctcatctacatccccctgccagacgagaagagcaggatcagcatcctgaaggccaac
ctgcgcaagagtcccatcagcaaggatgtggacttggacttcttggctaagatgaccaac
ggcttctccggcgctgatctcacagagatctgccagcgggcctgtaagctcgccatccga
gagagcatcgagaacgagatccgcagagagcgggagaggcagacgaacccatcagccatg
gaggtagaagaggatgaccccgtgccagagatcaggaaggaccactttgaagaagcgatg
cggtttgcccgtcgctctgtcagcgacaacgacatccgtaaatacgagatgtttgctcag
acactgcagcagagccgaggctttggcagcttcaggtttccctccagcgctgcaggtggc
agcggtccaagtcacggctctggtggaactggcagtggtccagtgttcaatgaagataat
gatgacgatctttatggataa
DBGET
integrated database retrieval system