Xiphophorus maculatus (southern platyfish): 102234352
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Entry
102234352 CDS
T02923
Name
(RefSeq) retinoic acid receptor gamma-like isoform X1
KO
K08529
retinoic acid receptor gamma
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xma03000
]
102234352
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
xma03310
]
102234352
Transcription factors [BR:
xma03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
102234352
Nuclear receptors [BR:
xma03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
102234352
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Ribosomal_60s
Motif
Other DBs
NCBI-GeneID:
102234352
NCBI-ProteinID:
XP_014324538
UniProt:
M3ZHC5
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Position
20:21337954..21389511
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AA seq
500 aa
AA seq
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MNKQPHFFTMATNREHQMRHMTGFSRAMYPFTFNSMRGHSPFDLLASSHLFGRFGADLPK
EMAALSVETQSTSSEEMVPSSPSPPPPPRVYKPCFVCQDKSSGYHYGVSSCEGCKGFFRR
SIQKNMVYTCHRDKNCQINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKDVKEEVV
LPENYELSGELEELVNKVSKAHQETFPSLCQLGKYTTNSSADHRVQLDLGLWDKFSELST
KCIIKIVEFAKRLPGFTTLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLN
RTQMHNAGFGPLTDLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQE
PLLEALKIYTRRRRPNKPHMFPRMLMKVTDLRGISTKGAERAITLKTEIPGPMPPLIREM
LENPDAFEDSSDSSDSASAPPPAIQAIKQEEKSTYESAFEEEEEEEEDDYWDEEREWGAD
SDGEPWGEAAQKKAVAGKTQ
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaataagcagccacactttttcacaatggcaacaaacagagagcaccaaatgcgtcac
atgacgggattctctcgtgccatgtaccccttcacctttaactccatgaggggtcactca
ccctttgacctgctggccagcagtcacctgtttggacgtttcggagcggaccttcccaaa
gagatggctgcgttgtcggtggagacgcagagcaccagttcagaggagatggtgcccagc
tccccttcccctcctcctcctccgcgggtctacaagccgtgctttgtgtgccaggacaag
tcatctggttatcactacggagtgagctcctgtgagggctgcaagggatttttccgccgg
agcatccagaagaacatggtgtacacctgccaccgagacaagaactgtcagattaacaaa
gtgacccggaaccgctgccaatactgtcgtttgcagaagtgctttgaggtcggcatgtcc
aaagaagccgtgcgcaacgacaggaacaagaagaagaaggacgtgaaggaggaggtggtg
ctgcccgagaactacgagctcagcggagaactggaggagcttgtgaacaaagtcagcaaa
gctcaccaagagacattcccgtctctgtgccagctgggaaaatacaccacaaactccagc
gctgaccacagagtgcaactggacctgggcctgtgggataagttcagtgagctttccact
aagtgcattataaagattgtggagtttgccaagcgactaccaggcttcactacgctcacc
atcgctgaccagatcaccctcctcaaatctgcatgcctggacatcctgatgctgaggata
tgcacccgctacactccagagcaggacacaatgacgttctcagacggcctgactctcaac
agaacccagatgcacaacgccggctttgggccgctcacagacctggtgtttgccttcgcc
ggtcagctcctgcctctggagatggacgacacagagacggggctcttaagtgcaatctgt
ctcatttgtggagaccgcatggacttggaagagccggaaaaggtcgacaaactccaggag
ccgctgctggaggctctaaagatctacactcgccgcagacgcccgaacaagcctcacatg
ttccctcgcatgctgatgaaagtcacagacctgcgaggaatcagcaccaaaggtgcagag
cgagccatcaccctcaagacggagatcccgggccccatgccgcctctgatcagggagatg
ctggagaacccggacgccttcgaggacagcagcgactccagcgacagcgcctcggcccct
cccccggccatccaggccatcaagcaggaggagaagtccacgtacgagtcggccttcgaa
gaggaggaggaggaggaagaggacgactactgggacgaggagagggagtggggggcggac
agcgacggcgagccgtggggggaggcggcacagaagaaggccgtggcgggaaagacgcag
tga
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