Xiphophorus maculatus (southern platyfish): 102234832
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Entry
102234832 CDS
T02923
Name
(RefSeq) leucine-rich repeat-containing protein 4B-like
KO
K16360
netrin-G3 ligand
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04514
Cell adhesion molecule (CAM) interaction
xma04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
102234832
04517 IgSF CAM signaling
102234832
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xma04515
]
102234832
Cell adhesion molecules [BR:
xma04515
]
Immunoglobulin superfamily
NGL family
102234832
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
LRR_9
LRR_14
V-set
Ig_2
LRRNT
VEGFR1-3_N_Ig-like
Ig_6
DUF7617
DUF7498
Motif
Other DBs
NCBI-GeneID:
102234832
NCBI-ProteinID:
XP_005814946
Ensembl:
ENSXMAG00000010784
UniProt:
A0A3B5QE01
LinkDB
All DBs
Position
10:3032935..3042458
Genome browser
AA seq
737 aa
AA seq
DB search
MRLVMVTSPCTPSPLLWLVQLLLWFHHHGPQLTEAAPPCPNPCTCSNQASRVICTRKSLD
QIPDSISENTRYLNLQENSIQVIKSDTFKHLRHLEILQLSKNHIRQIEVGAFNGLPNLNT
LELFDNRLTVVPTQAFEYLSKLRELWLRNNPIETLPAFAFNRVPSLRRLDLGELRKLGFI
SEAAFEGLVNLRFLNLGMCGLKDIPNLTPLVRLEELELSGNQLGIVRPGSFQGLVSLRKL
WLMHSRVTIIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVCNCD
VLWLSWWLKETVPSNTTCCARCHAPPGLKGKYIGELDQTHFVCYAPVIVEPPTDLNVTEG
MAAELKCRTGTSMTSVNWFTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDTGQYTCMV
TNSAGNTTATAVLNVSASDPSNSYSYFTTVTVESVEPSKEENSARQYVNETFVGSPKPPG
HGGVDGLSSSTISPSLSTLSPLSPRTTENSVTVSLMDVTNIPGLDDVMKTTKIIIGCFVA
ITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIVNVEDEIGAGAGSGISGGSTINSGTGT
EGTLRIHHPEVVNLPNIGRTDTLNHYYKTHHFNNNVMGLSITEGMGPGGILNSKNQHGQD
NPISCTSVPISTSNLLSASGNGTNTSSMSPPLPMSLPMPTMGLHGSIKGFMGQNQNPQME
PLLFKGSSKENVQETQI
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcttgtcatggtgaccagcccctgcaccccatcccccctcctctggttggtccag
ctcctgttgtggtttcaccaccatggaccccagctgacagaggcggcaccgccatgcccc
aacccctgcacctgctccaaccaggcgagccgggtcatctgtacaaggaagagtttggat
caaatcccagacagcatttcagaaaacacaagatacctcaatctacaagagaactcaatt
caggtgatcaagtctgacacattcaagcatctgcggcatctagaaattctccagctctct
aagaaccacatccggcagattgaggtgggagctttcaatggcctccccaacctcaacacg
ttggagctttttgacaaccgtcttacagtggtaccaactcaagcttttgagtacctcagc
aaactaagagaactatggctacgaaacaaccccattgagacactgccagcctttgctttt
aaccgcgttccctcattaagacgtctggacctgggggaactcaggaagttgggtttcatc
tcagaggctgccttcgaaggtctggtaaatctgcgttttttgaatcttggcatgtgcggc
ttgaaggacatccctaaccttaccccgcttgtacgacttgaggagttggagttatcaggg
aatcagctggggattgtccgtcctggatcatttcagggactggtgtcacttcgaaagctt
tggctgatgcactccagagtgactatcattgaacgcaatgcttttgacgacctcaagaac
ttggaggagctcaacctttcccacaattctctgcattctctgccccatgatctgttcacc
cctttgcaccagttggagagggtacacctcaaccataatccttgggtttgcaactgtgac
gtcctgtggctcagctggtggcttaaagagacagttcccagcaacaccacgtgttgtgct
cgttgccatgccccgccaggcctgaaagggaagtacattggggaactggatcagacccac
tttgtctgctatgctccagtgattgtggagccgcccactgatctgaatgtcaccgaagga
atggccgcagagctgaaatgccgtaccggaacctctatgacctctgtgaactggttcacc
ccaaacggcacgctgatgacacacggatcataccgagttaggatctcagtgcttcatgac
ggaacactgaacttcacaaatgtgaccgtgcaggacaccgggcagtatacctgcatggta
accaactccgctgggaataccactgcaaccgctgtgctcaacgtctctgcttctgatcct
agtaacagctacagctatttcaccactgtcacagttgagtcagtggagccaagtaaggag
gagaactcagcaagacagtatgtgaatgagacctttgttggttcccccaagcctcctggt
catggaggggtagacggtctatctagcagcactatatcaccatctctgtctactctgtca
ccactgtcacccagaactactgaaaattcagtgactgtgtctctaatggatgtaactaac
attccaggcctggatgatgtaatgaaaacaactaagatcatcattggttgcttcgtcgcc
attacttttatggcagctgtgatgctggtggtcttctacaaactccgtaagcaacaccaa
ctacacaaacaccacggccctgccagagcaattgagattgtcaacgtcgaagatgaaatt
ggagctggggctggaagtggcatctctggcggttcgacgataaattctgggactggtacg
gagggaaccttgagaatacatcacccggaagtagtcaaccttcccaacattggtcgcacg
gataccctaaaccattactacaagacacatcatttcaacaacaatgtgatgggtctcagt
atcaccgaggggatgggaccaggtggaatcctcaacagcaagaaccagcatggccaggac
aaccctatctcctgcacatcagtcccaatctctacatcaaatttgctctctgcatcaggc
aacggcaccaacaccagctccatgtccccaccgctgccgatgtctctccccatgccaact
atgggcttacacggatcgatcaagggtttcatgggccaaaaccagaacccccaaatggag
ccgctgctcttcaaggggagctccaaggaaaacgtccaagagacccagatctaa
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