Xiphophorus maculatus (southern platyfish): 102234869
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Entry
102234869 CDS
T02923
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2-like isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04120
Ubiquitin mediated proteolysis
xma04137
Mitophagy - animal
xma04144
Endocytosis
xma04340
Hedgehog signaling pathway
xma04350
TGF-beta signaling pathway
xma04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102234869
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
102234869
04350 TGF-beta signaling pathway
102234869
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102234869
04137 Mitophagy - animal
102234869
09144 Cellular community - eukaryotes
04520 Adherens junction
102234869
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xma04131
]
102234869
04121 Ubiquitin system [BR:
xma04121
]
102234869
03029 Mitochondrial biogenesis [BR:
xma03029
]
102234869
Enzymes [BR:
xma01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
102234869
Membrane trafficking [BR:
xma04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
102234869
Autophagy
Mitophagy
Other mitophagy associated proteins
102234869
Ubiquitin system [BR:
xma04121
]
Ubiquitin ligases (E3)
HECT type E3
102234869
Mitochondrial biogenesis [BR:
xma03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
102234869
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
102234869
NCBI-ProteinID:
XP_023189583
Ensembl:
ENSXMAG00000013616
LinkDB
All DBs
Position
5:complement(25421327..25484913)
Genome browser
AA seq
776 aa
AA seq
DB search
MSNQGVRRNGPVKLRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVRNTLDPK
WNQHYDLYIGKSDSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGYQRLDLNRL
GPNDNDTVRGQIVVSLQSRDRIGSGGPVVDCSRLFDNDLPDGWEERRTASGRIQYLNHIT
RTTQWERPTRPASEYSSPSGRPLSCVVDENTPVMTPVNGAVASGPPGEQRVQERRVRSQR
HRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVNCEELG
PLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNSPSSNGSRVAPDSQNTNL
SHPPQLKDQGGPGVPPQALSPAQLPEEAECLTVPKYKRDLVQKLKILRQELSQQQPQAGH
CRIEVSREEIFEESYRQVMKMRPKDLWKRLMIKFRGEEGLDYGGVAREWLYLLSHEMLNP
YYGLFQYSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQL
LGKPITLDDMESVDPDLHNSLVWILDNDITGVLDHTFCVEHNAYGEIIPHELKPNGKSIP
VTEDTKKEYVRLYVNWRFLHGIEAQFLALQKGFNEVIPQHLLKSFDEKELELIVCGLGKI
DIADWKSNTRLKHCTPDSNIVKWFWKAVESFDEERRARLLQFVTGSSRVPLQGFKALQGA
AGPRLFTIHQIDANANNLPKAHTCFNRIDIPPYESYDKLYDKLLTAIEETCGFAVE
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccaaggagtaaggagaaatggcccagtaaagctgcggttgacagtcctctgt
gcaaaaaacctggcaaagaaagacttctttcggttgccggatccttttgctaaagtggta
gtggacggttctggacaatgccactcaacagatactgtgagaaatactcttgatccaaag
tggaatcaacattatgatctctacatcggaaagtcggactccattacgatcagtgtctgg
aaccacaagaagatccacaaaaagcagggcgcgggattcctcggctgcgtccggctcctg
tccaatgccatcaacagactcaaagacacgggctatcagagactggacctgaataggctg
ggccccaacgataacgacaccgtaagaggacagatagtagtgagtcttcagtccagagat
cgcatcggatccgggggaccagtggtagactgcagccgcctgtttgacaacgatttgccc
gacggctgggaagagaggaggacagcatcggggaggatacagtacctgaaccacatcacc
cgcaccacacaatgggagagacccaccaggccggcgtcggagtactccagcccatccggg
cgtccgctgagctgcgtggtagacgaaaacacgccggtgatgactcctgttaacggggcc
gtggccagcggacctccgggcgaacagcgtgtccaggagcgacgggttcgatcgcagcgg
catcggaactacatgagtcgaacacacctgcatacgccgcccgatctgcctgagggctac
gaacaaagaaccacccagcagggccaggtgtatttcctccacacacagaccggagtcagc
acctggcacgacccccgagtacccagggacttaagcaatgtgaactgtgaggagctggga
ccactgcctccaggctgggagatcaggaacaccgccaccggccgcgtctactttgttgac
cacaacaatcgaacaacacagttcacagatccacgattgtctgccaacctgcatctagtg
ctcaacagcccgagttcaaatggttcccgcgtggccccggacagccaaaacactaacctc
agtcatccaccacagctaaaggaccagggtggtcccggagtccctccgcaggctctgtct
cccgctcagctgccggaagaggcggagtgtctgacggtgcccaagtacaagagagacctg
gtgcagaagctgaagattctccggcaggagctctcgcagcagcagccgcaagccggccac
tgccgcatcgaggtcagccgggaggagatcttcgaggagtcgtatcgacaagtgatgaag
atgcgtccgaaggatctctggaaaagactgatgataaaattcagaggagaagagggactg
gactatggaggagttgctcgggaatggttgtacctgctgtcgcacgagatgttgaaccca
tattacggcttgttccagtactccagagacgacatctacactctacagattaacccagac
tctgctgtcaacccagaacacctgtcgtacttccactttgtgggccgcatcatgggcatg
gcggtgtttcacggccactacatcgacggaggcttcacgttgccgttttacaaacagctg
cttgggaaaccaatcacgctggacgacatggagtctgtcgaccccgacctccacaacagc
ctcgtttggatcttggacaatgacatcacaggggtcctggaccacaccttctgcgtggag
cacaacgcttacggagaaatcatcccacacgagctgaagcccaacgggaagagcatcccg
gtgacggaggacaccaagaaggagtatgtcaggctctacgtgaactggcgtttcctccat
ggcatcgaggctcagtttctggctctccagaaaggtttcaacgaggtcatcccgcagcac
ctgctcaagtccttcgacgagaaggaattagagctgatcgtgtgcggcctggggaagatc
gacatcgccgactggaagtccaacactcggctgaagcactgcaccccagacagcaacatc
gtcaagtggttctggaaagccgtggagtcgttcgacgaggagaggagggcccggctgctg
cagttcgttactggctcgtccagagtcccgctgcagggcttcaaggctttacagggtgca
gcaggacccagactcttcaccattcatcagattgatgccaacgccaataacctgcccaaa
gcgcacacctgcttcaaccggatcgacattcctccctacgagagctacgacaaactgtac
gacaagctactgacggcgatcgaggagacgtgcggcttcgcggtggagtga
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