Xiphophorus maculatus (southern platyfish): 102234895
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Entry
102234895 CDS
T02923
Symbol
pcm1
Name
(RefSeq) pericentriolar material 1 protein isoform X1
KO
K16537
pericentriolar material 1 protein
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xma03036
]
102234895 (pcm1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xma03037
]
102234895 (pcm1)
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
102234895 (pcm1)
Cilium and associated proteins [BR:
xma03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
102234895 (pcm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCM1_C
Motif
Other DBs
NCBI-GeneID:
102234895
NCBI-ProteinID:
XP_014328138
Ensembl:
ENSXMAG00000007796
LinkDB
All DBs
Position
5:29696387..29722858
Genome browser
AA seq
2115 aa
AA seq
DB search
MATGGAPFDDSAEELQTWTAPNGSLEDRLNNMNWGIQQKKANRSTEKNKKKLSAAVESRL
TNDISPESTPGAGRRRTRTPHSFSHIKYTTQMSVPDQAELDKLRQRINFTDLDERSIGSD
SQGRVTAANNQRQLDGENKKPFNYLPLHVNTNKSKEMLHPSASAPTTPAVTKETKKQSPG
RRETLSPVGPRKESPRMSRCGTDRGLLTQREYGRPEPKIDSSQVVSKLVQIREYISKASA
MRDDLVEKNDVPANVERLSYLIDHLKEQEKSYLRFLQKMLAQESDCEVGTLDSAVGSGSL
ADSSSLNIEVQSSDASNITGGRTEGVRADQKEELENLRKQHELLKKMLEQQEQLRALQGR
QEALMAMQHSAEQALAVIEDTVVTETTGSVSGLSITSELNEELNELIQRFHNQLHDSKTK
TVPDNRRQAQSLSLSREVSWSRPPHAVGPPQHRPLLHSASGPHAGLDAEGVAASAKLTKL
QELKDKKQTMDKILQELHSLRDHTLNNNSCRGLSAQCSPSLGGSSDCTSALCSNAASTSF
QPLFTQQDGSGSSDKLRKLKEVHKRLNELRELVQYYEQTSDMMVDAVNENVKEPDDEEED
EEDEDETEDGSMFETVFELEHENRHPGANLRNPQRSSNRADVNSLTNGRSFRSGTANNQD
GRLNTECEINNRAAANLRSLNVTTPIECQYNRDLPYVEVKDEDDDDDDEDGVDNDEGGQA
MLPDSASESSQGSSFGNAAGFPPKVHRQTATQKLRQLQELVAMVQSDDTDGTTANDDEAL
HQQPNNTRSAVCGASGAGSKQSPRDLALSTKAREKLYEEKLRQQKQELRQLHEERQRLIE
IQGKIQDLQWTCPDLPSSVSSTGSQQGLLRKAPLAASTPANVKASPSPTPKTNLTVLKPT
AQEAASSSVTDNEQLWSEMRRRQILREDLRQRRKQLESLMAEHQRRSGFRDSPCQMEEQE
GSATLSQSINRDERTMATWGSSPCNLDDENEEEDDYHSEMCAEEEEEECTESSSDDEIHI
YSSRMNQSSYSNGKNQGSNPKPPAAFSSDVEAHLHNETKVKDQSRGTKPPVGQHGGVRRQ
ENLRWASELSFAEGSGHWQDQINQLQRQLEFSTSMCQTLLQDQQTLSYMLQTLLTGQYSV
LPNNVSSPQVHLVMHQLNQCYTQLAWQQSNVQRLKQVLNDLILQQQQQQQQQPPPSAAGW
QTQKRTSAQESGPGSSASPGIFLPFTSTTHPSGGNLANSALSPFCPGFNLYPSFPGAMGE
SPQSAEGPASPELYKLDPKTLIKTEYMGFPPPLQRSPVNTALERGSAARLNTSYTNNITR
HLPSKAELQESPPSSLIFNKSQSRAQEFKASQDSFCSIPDPDDPATVTKTFKAGKKASAQ
ANLASRSKTSKNRRRKSKGHNKNSEGQDSDSFSSIAEFGQERAALSHHKDQNQILLDKLT
QEKLDSKARLGTKRNDLSSAYAWRTPFLSNRIACTEAPDASSDFSLFEALRETIYSEVAT
LISQNESRPHFLIELFHELQLLNTDYLRQRALYSLQDIVTKHLAVRRAAEDQLPPLGSVV
WTAGSQSELTPSQSLVTSDEEVMEKNLRHEQDLKRREDAESVDNDSNMSTSSNLEPFASD
DLGNTVIHLDKALVRIREYERMKLKAEFNPRSASSRSDATNARGASANPAEQVEESAANG
VHCPQIDTQQLDRQIKAIMTEVIPFLKENMNEVCSHQLLTSVRRMVLTLTQQNDESKEFV
RFFHKQLGGILQESLCKFEGRTLRDCGEDLLVEISEILFNELAFFKLMQDLDSSNAATAN
PGAKFKNKKTSPQLCKTNQNLEENSEADAARSVSPAFADEDKDQDETEKQECGVLQEDYL
QTEGRSSRSSHGSEGEEEEEEDEGHEKAALLSISLSKAETQALTNYGSGEDENDEEEVEE
FEAGPVDVQTSLQVSADGQVEQEVVAPVTTSSEPEEKMSEQNCSQTNEVSNPAETLDSSA
EGRTLVELQSPEEQQEAGAAAAAEGAAEPSHDVPKETASSPSSDSPVLVSGDEIGSGNTS
QKSDEEDFVKVDDVPLQLTVMCEEELQKRIVEEQQNNNLSVEILNGNAELLPGLVGNAQA
LKEPDTIDAPDVSLC
NT seq
6348 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccggaggtgctccatttgatgacagtgcagaagagctgcagacctggacagca
cccaatggcagtctggaggacagactgaacaacatgaactgggggattcagcaaaagaaa
gctaaccggtcgacagagaaaaacaagaagaagctttctgcagcagtggagagccgcctg
actaatgatatttcaccagagtccaccccaggggccggccgcaggagaactcgcactcct
cattctttttcccacatcaaatacacgacccaaatgtctgttcctgaccaggctgagctg
gacaagctgcgccaaaggatcaatttcacagatctggatgagcggagcatcggcagcgac
tcccagggccgcgtcacggccgccaacaaccagcggcagctagacggagagaacaagaag
cctttcaactacctgcctctgcatgtcaacactaacaagagcaaagagatgctccatccc
tcagcttctgccccaactactccagctgtcaccaaggaaaccaagaagcagagtccaggg
cggagggaaacattaagtcccgtaggtcctcgcaaggagtcgccaaggatgagtcgctgt
gggacagacagaggacttctgacgcagagagagtatgggaggccagagcccaaaatagac
agcagccaggtggtgagcaaactggttcagattcgggaatacatcagtaaggccagcgcc
atgagggacgatctggtggaaaaaaacgacgttcccgccaacgttgaacgtctttcttac
ctcatcgaccacctcaaggagcaggagaagtcctatctacgcttcctgcagaaaatgctt
gcccaggagagtgactgtgaggtcgggacgctggactccgcggttggatcagggtcactg
gctgacagctcctcccttaacatagaggtccagtcttcagatgcttcaaatataacgggt
ggtaggacagagggtgtgcgtgccgaccagaaggaggagctggagaacctgcgtaagcag
catgagctgctgaagaagatgctggagcagcaggagcagctcagagcgctgcaaggccga
caggaagctctaatggccatgcagcacagtgcagagcaggcgctcgctgtgatcgaagac
acagtcgtgacagaaaccaccggcagtgtttccggcctgagcatcacatcagaactgaat
gaagagttaaatgagctgattcagcgtttccacaaccagctgcacgactctaagaccaaa
acggtgccagataaccgtcgtcaggctcagagcctgtccctctccagagaagtgtcctgg
tcccgccccccccacgctgttggtccacctcagcacaggccactccttcactccgcttcc
ggcccacatgccggtctggacgccgagggagtggccgccagcgccaaactcaccaagtta
caagaacttaaagacaaaaagcaaaccatggacaagattctgcaagagttgcattcactg
cgagaccataccctgaacaacaactcatgtcggggcttgtcagcacagtgcagtccaagt
ttaggaggatcttcagattgtacatcagctctctgctccaatgcagcctccacttccttt
cagcctttattcacacagcaggacggctctggttcttcagacaagctcaggaagctgaag
gaggtccataagcgccttaatgaactgagggagttggttcagtactacgagcagacgtct
gatatgatggtggatgccgtcaatgaaaatgtgaaagagcctgatgatgaggaggaggat
gaggaggatgaagatgagacggaggatggatccatgtttgaaactgtgtttgagttggag
catgagaatcgccatcctggtgcaaaccttagaaacccacagcgcagcagtaaccgggcg
gacgtgaatagcctgaccaacggccgcagcttcaggagcggcaccgcaaacaaccaggac
ggtcgactcaacaccgagtgtgaaatcaacaaccgagcagcagccaacctccgcagcctc
aacgtcaccacgcctatagagtgtcagtacaacagggacctcccctacgtggaggtaaag
gatgaggatgatgatgatgatgatgaagacggtgttgataatgatgaaggaggccaggcc
atgcttccagacagtgcgtcggagtccagtcaagggagcagctttgggaacgctgcgggt
ttccctcccaaggttcaccgccagacggcgacgcagaagctgaggcagctgcaggagctg
gttgccatggttcagagtgatgacacagatggaacaacagccaatgacgatgaagcttta
caccagcagcccaataacacccgatctgctgtgtgtggggcctctggggccggatccaaa
cagagtccaagagacctggctctctccaccaaggccagggagaagctgtacgaggagaag
ttacgccagcagaagcaggagctgaggcagcttcatgaggagagacagagactcatagaa
atccaaggaaagatccaggacttgcagtggacctgccccgaccttccgtcgtctgtgtcc
agcacaggcagccagcagggtctgctgaggaaggctccgcttgcagcttccacccctgct
aacgtcaaagcttctccttcccctacacccaaaaccaacctaaccgtgctcaaacccacc
gctcaggaggcagcttcttcttccgtcaccgacaacgagcagctttggtccgaaatgagg
cggagacaaattttgcgagaagacctgcgacagcggcgaaagcagctggagtcgctgatg
gccgaacatcagagacgtagcggtttccgtgactccccctgtcagatggaagagcaggag
gggagtgctactctctcgcagtccatcaacagggatgaaagaacaatggcaacatggggt
tccagtccttgcaacctggatgatgagaatgaggaagaggatgattatcactctgagatg
tgcgctgaggaggaagaggaagaatgtacagagagcagctccgatgatgagatccacatc
tactcgtcgaggatgaaccagagctcctacagtaacgggaagaatcagggaagtaacccg
aagcctccagcagccttttccagcgacgtcgaggctcatcttcacaacgagacgaaggtg
aaggatcagagccgaggcacaaagccgcctgtgggccagcacggaggcgtccggcgtcag
gagaacctgcgctgggcctctgagctctccttcgccgagggctccggccactggcaggat
cagataaaccagctccagaggcagctggaattcagcaccagcatgtgtcagacgctcctg
caggaccaacagactctgtcatacatgttacaaaccctgctgacgggtcagtacagcgta
ttacccaacaacgtgtcgtcacctcaagtccacctggtgatgcatcagctcaaccagtgc
tacacccagctggcctggcagcaaagcaacgtccagaggctgaaacaggttttgaacgac
ctgatcctccagcagcagcagcagcagcagcagcagccccccccctcagcagcaggttgg
cagacgcagaagcggacttcggctcaggagtccggtcctggctcctccgcctcccccggc
atcttccttccttttacctctacaacgcatccttcaggtggaaacttggcgaactctgcc
ttatctccgttctgccctggcttcaacttgtatccgtcattccctggtgctatgggtgag
tctcctcagagtgcagaaggtccagcttcacctgaactttataaactggatcccaagaca
ttgatcaaaaccgagtacatgggtttccctccgccactgcagcgctctcctgtcaacact
gctttggaaagaggatcagctgcacgactgaacacctcctacaccaacaacataacccga
catctgccgtctaaagcggagctgcaagagtctcctccctcatccctcatctttaacaaa
tcccagtctagggcgcaggagtttaaggcttcacaggacagcttttgcagtatccctgat
cccgatgatcctgccacggtcacaaaaacctttaaggctgggaaaaaggcctctgcacaa
gccaacctggcatctcgaagcaaaacctccaaaaacagacgcaggaagagcaaagggcac
aacaagaacagcgaaggccaagacagcgacagctttagcagcattgcagagttcggccag
gagagggcagccttgtctcatcacaaagaccagaatcagattctgttggacaaactgact
caagaaaaactggacagcaaggcaaggctcggaaccaaacggaacgacctgtcctccgct
tatgcttggagaactcccttcctctctaacagaattgcatgcacagaagctccagatgcg
agcagcgacttctccttgttcgaggcgctgcgtgagaccatttactccgaggtggccact
ctgatatcgcagaatgagtcgagaccccactttctcatcgagctcttccatgagttacag
ctgctcaacacagactatttacgccaaagagctctgtattcgctgcaggacatagtgacc
aagcacctggcagtaagacgtgcagccgaggaccagctgccccccctggggtcggttgtg
tggacagcaggctctcagtctgagctgactcccagccagagtctggtcaccagtgatgaa
gaggtgatggagaagaacttgagacacgagcaggacctaaagaggagagaagacgcagaa
tctgttgataacgacagcaacatgtcaacctcctccaacctggaaccctttgctagtgat
gacctgggcaacaccgtgattcatttagacaaagctctggtgaggattagggagtatgag
cgcatgaagcttaaagccgagtttaaccctcgcagtgccagcagcaggtctgacgcgaca
aatgctagaggtgcttccgctaaccccgctgaacaagtggaagaaagtgcagccaacggt
gtgcactgccctcagatcgacacccagcagctggaccggcagattaaagccatcatgacc
gaagtcattcccttcctcaaggagaacatgaacgaagtgtgttcccatcagctgctgacg
tccgtgcgccgcatggtgttgactctcacccagcaaaacgacgagagcaaggagtttgtt
cgcttcttccacaagcagctgggaggaatcctgcaggaatctctctgtaaatttgagggc
cgcacgctgagggactgcggggaggacctgctggtggagatctcagagatcctctttaac
gagctggccttcttcaagctgatgcaggatctggacagcagcaacgccgccaccgccaac
ccgggagctaaatttaaaaataagaaaacgtctccacagctctgtaaaacaaatcagaac
ctggaggagaactctgaagcagatgctgccaggtctgtttctccggcatttgctgatgag
gacaaggatcaagatgagacagaaaagcaagaatgtggcgtcctgcaggaggattacctg
cagactgaggggaggagcagcaggagcagccatgggtcagaaggtgaagaggaggaggag
gaggatgaaggacatgagaaagcagctcttctgtcaatcagtctgtctaaagcagagact
caggctctgaccaactacggcagcggagaggatgaaaacgatgaggaggaggtggaggag
tttgaagctggacctgtagacgtccaaacgtctctgcaggtttcggctgacggacaggtg
gagcaggaagtcgtcgcgccggtcacaaccagcagcgaacctgaggagaaaatgtctgaa
cagaactgttcacaaacaaacgaggtcagtaatccagccgagaccttggactcctcagct
gaaggacgcactctggtggagctccagagcccagaggagcagcaggaagctggggctgca
gctgctgcagagggggctgctgaaccctcccacgacgttcccaaggagacggccagcagc
cccagctcagactcgcccgtcctcgttagcggcgacgaaatcggatcgggaaacacgagt
caaaagtcggacgaggaagacttcgtcaaggtggacgacgttcctctgcagcttacggtg
atgtgcgaggaggagctgcagaagaggatcgtcgaggagcagcagaacaacaacctgtct
gtggagatcctgaacgggaacgccgagctgctgcccgggctggtggggaacgctcaggct
ctgaaggaaccagacaccattgatgctccagatgtctcactctgctga
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integrated database retrieval system
