Xiphophorus maculatus (southern platyfish): 102234963
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Entry
102234963 CDS
T02923
Symbol
rbck1
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1
KO
K10630
RanBP-type and C3HC4-type zinc finger-containing protein 1 [EC:
2.3.2.31
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04217
Necroptosis
xma04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
102234963 (rbck1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
102234963 (rbck1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xma04121
]
102234963 (rbck1)
Enzymes [BR:
xma01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
102234963 (rbck1)
Ubiquitin system [BR:
xma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
102234963 (rbck1)
Multi subunit type E3
LUBAC complex
102234963 (rbck1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4_2
zf-C3HC4
Zn_ribbon_RanBP
ubiquitin
zf-RING_11
IBR
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
102234963
NCBI-ProteinID:
XP_005805306
Ensembl:
ENSXMAG00000005890
UniProt:
M3ZUM2
LinkDB
All DBs
Position
20:complement(11625079..11632526)
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AA seq
515 aa
AA seq
DB search
MMASEISPKGNIKEAEALALSLGEAISSGDSEEAAELCKKLSQLSVEVSVNIKSHVYPQD
SFRLMVGVQDAESEDYIPVTLIVSTGMTIAEVKDKISQDFGFHPTLQRWVIGKRLAQDQE
TLYSHGIRKSGDQAFLFILSANAAQLTRQQHNQDQEQQRIAGIVESLPSLQLCPRGVGSG
DKTVPPPVPPKNVTPPKPAPKPQLGWACTMCTFLNKPTRPGCEICGAERPQDYEVPDVYQ
PDQDEVLRIQQEQLALLQYEQAQQLEREQNYLYLLATDDHNLITNTTETDCPICFSTLEP
GDGVVLRECLHTFCRECLKGTVINSQDAEVSCADTDCESKLLDREIKELLTEEEHQRFLE
LRLSIAESRSEHSFHCQTPNCRGWCVYEDDVNEFPCDLCNETNCILCRAIHKDMNCKDYQ
DDLRIRAENDEAAQKTKQMLENMLQNGEAMKCPRCDIIVQKKDGCDWICCLMCKTEICWV
TKQARWGPKGAGDTSGGCKCRVNNQPCHPNCQNCH
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgatggcttctgaaatttcacccaaagggaacataaaagaagcagaggcgctggccctc
tccttgggtgaagccatcagcagtggagactctgaagaggcagctgagctgtgcaagaaa
ctttcccagctctctgttgaagtgtcagtcaacatcaagagccatgtctaccctcaggac
tccttcagattgatggttggtgtacaggatgcggagtcagaagactatatcccagtaacc
cttattgtttccactggcatgacaattgcagaagtaaaagataagatcagtcaggacttt
gggttccaccctacactccagcgctgggtaatcggtaaacgcttggcccaagatcaagag
acattatatagccacggcatccgcaagagcggagatcaggctttcctgtttatcctctct
gccaatgcagcccagcttacacggcagcaacacaatcaggatcaggaacaacagcgcata
gctggtattgtggaatctttgccgtcattgcagctttgccctagaggcgtaggcagtggc
gacaaaacagttcctcctcctgttcctcctaaaaacgtgactcctcccaaacctgctcct
aaacctcagttgggctgggcctgcacaatgtgcacttttctcaacaaaccaacacgcccc
ggctgtgagatatgtggagcggaaagacctcaggactatgaggtaccagatgtctatcag
ccagaccaggacgaagtcttacgcattcagcaagaacagctggctttactgcaatatgaa
caggctcagcagctggaacgtgagcagaactatttgtacctgttggccacagatgaccac
aacctcatcactaacaccacagagacagattgccccatctgtttctctactctggagcca
ggggatggggttgtactcagagaatgtctgcacaccttctgcagggagtgtcttaaaggg
acagtcataaacagccaggatgcggaggtatcttgtgcagatacggattgcgagagcaag
ttattggatcgagaaattaaagagctgctcacagaggaggagcaccagcgatttttggag
ctgcgcttgagcattgcagagagtcgctctgagcacagttttcactgccagacccccaac
tgtcgagggtggtgcgtctatgaggatgatgtcaacgagttcccctgcgacctctgcaat
gagaccaattgcattctctgccgagccatccacaaagacatgaattgcaaggactaccag
gacgacctgcgcatccgagcagagaacgatgaagcagctcagaagacaaagcagatgctg
gagaacatgctgcagaatggagaagccatgaaatgtccacggtgtgacatcattgtccag
aaaaaggatggctgcgattggatctgttgtctgatgtgcaagacggaaatctgctgggtc
accaaacaagcccgatggggaccaaaaggagctggcgatacatccggtggctgtaaatgt
cgggtcaacaatcaaccttgtcatcccaattgccaaaactgtcactga
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