Xiphophorus maculatus (southern platyfish): 102234978
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Entry
102234978 CDS
T02923
Symbol
taf6l
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102234978 (taf6l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xma03021
]
102234978 (taf6l)
03036 Chromosome and associated proteins [BR:
xma03036
]
102234978 (taf6l)
Transcription machinery [BR:
xma03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
102234978 (taf6l)
Coactivators
SAGA/TFTC/STAGA complex
102234978 (taf6l)
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
102234978 (taf6l)
STAGA complex
102234978 (taf6l)
TFTC complex
102234978 (taf6l)
SAGA complex
102234978 (taf6l)
SLIK complex
102234978 (taf6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
CENP-S
Motif
Other DBs
NCBI-GeneID:
102234978
NCBI-ProteinID:
XP_005807963
Ensembl:
ENSXMAG00000007835
UniProt:
M4A066
LinkDB
All DBs
Position
14:4010924..4017804
Genome browser
AA seq
639 aa
AA seq
DB search
MADREERRFAEVSQDSVKLMAESTGVDLADDVAALLAEDVCYRLREAAQTSSQFMRHAKR
RKLTVEDLNRALRWSRVEAVCGYGAQDALPFRSVKEGELFFVEDREINLIELALATNIPK
GCAETMVRVNVVYLDGKGNVEPQGTVPTAVQTLSDDLLKYYQQITRAILGDDPHLMKMAL
LDLQSNSKIAALLPYFVYVISGVKSVSHDLEQLNRLLHMVKSLVQNPYLYLGSYVRSLVS
SVMYCILEPLAASINPLNDHWTLRDYAALLLSHIFWTHGDLVSGLYHQILLSLQKVLSDP
VRPLCSHYGAVVGLHALGWKAVERVLFPHLPAYWANLQAVLDDYSVSNAQVKADGHKVYG
AILVAVERLLKMKAVSLSQSAEGGSSCQLGSGAGSAGYRVGSPGLSPPSEPLSEAVLGIA
SHLQAGSAGCPWEEWSPVPLPAMYSELYSFFGDSLAVRFSTGPGFGSYPPCASACFREAR
KEQLGPAANTDTARKMPQLTANLNISPRQDGSPRTDPPPPSLAATGAGRSLARSSSVQRS
RSSSSRSGQRSAGVSRDVFPKARFISPQSGPPAFSFVIGGRQMGRRCQGRRPFQTTFSLS
SSLPANPPRAYAHKLPVIGRVGKPVRRWTCSHYSLYLPL
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccgcgaggagcggcgctttgctgaggtttcccaggactccgtcaagctcatg
gcagagagcaccggcgtggatcttgctgatgatgtagcggctcttcttgctgaagatgtg
tgttaccgcctcagggaggcagcgcagacgagttcccagttcatgagacatgccaagagg
aggaagctgactgtggaggacttgaacagagccctgcgatggagccgtgtggaggccgtc
tgtggttatggggcgcaggacgctctgcctttccgatccgtcaaagagggagagctgttc
tttgtcgaggaccgtgaaattaacctgatagagctggccctggccaccaacattcccaaa
ggttgtgctgagaccatggtgcgagttaatgtggtgtatctggatggcaaaggcaacgta
gagcctcaggggacagttcccaccgctgtgcagactctgtcagatgaccttctcaagtac
taccagcagatcaccagggccatcctgggagatgacccccacctcatgaagatggctctg
ctcgaccttcagtccaactcaaagattgctgccctgctgccatactttgtctatgtcatc
agtggagtcaaatcagtaagccacgacctggagcagctcaacaggctcctgcacatggtg
aagagcctggtccagaacccgtacctgtacctgggctcgtacgtccgcagcctggtctcc
agcgtcatgtactgcatcctggaaccactcgctgcctccatcaacccactcaatgaccac
tggaccctccgggactatgcagccctgctactcagccacatcttctggactcacggtgat
ctagtgagtggtctctaccaccagatcctgctctctctccagaaggttctctctgaccca
gtcaggccactctgctcccattacggagcggttgtgggccttcacgctctgggttggaag
gctgtggaaagagttcttttcccacacctccctgcttactgggccaacctgcaggctgtg
ctggacgactactcagtgtccaatgcacaggtcaaagcagatggacacaaagtctatgga
gccatcctggtggcagtggagcgtctgctgaagatgaaggctgtgtctctgtcccagtca
gcagagggcggatccagctgccagctgggttctggagccgggtctgcggggtacagggtg
ggctccccaggcctcagtcctccatcagagcctttgtcagaggccgttctggggattgcc
agccaccttcaagcaggcagcgcgggctgcccctgggaggagtggtccccagtccctctt
ccggcgatgtacagtgagctttactctttctttggggacagtctggccgtcaggtttagc
acaggaccagggtttgggagctatcccccctgcgcttcggcctgtttcagggaagctcgg
aaggagcagctaggcccagcagcaaacactgacaccgcccggaaaatgccgcagctgacc
gccaacctcaacatcagcccacgacaggatgggagccctcgcaccgaccctccccctccg
agcctcgcagccacaggagcaggaaggtctctggctcgctcctcctccgtgcagcgctcc
aggtcatcctcatcacgttcgggccaacgctccgccggtgtttctcgggatgttttcccc
aaggctcgtttcatctcgccacagtcaggacctccagcgttctcctttgtcattggtgga
cggcaaatgggtcgacggtgccagggccgccggccctttcagaccacgttttccttgtcc
tcctctctgcctgccaacccgccccgcgcctacgcccataagcttccagtaattggccgg
gtggggaaaccggtgcgtcgctggacgtgttcacattactcgctttacctgcctctgtag
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