Xiphophorus maculatus (southern platyfish): 102235138
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Entry
102235138 CDS
T02923
Symbol
arhgef12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04270
Vascular smooth muscle contraction
xma04625
C-type lectin receptor signaling pathway
xma04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
102235138 (arhgef12)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
102235138 (arhgef12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
102235138 (arhgef12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xma04131
]
102235138 (arhgef12)
Membrane trafficking [BR:
xma04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
102235138 (arhgef12)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
RGS
HIR3_2nd
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
102235138
NCBI-ProteinID:
XP_014324998
Ensembl:
ENSXMAG00000008860
LinkDB
All DBs
Position
18:complement(21379328..21436958)
Genome browser
AA seq
1433 aa
AA seq
DB search
MSDPQFSSTDRFTKKAIRTSSILSKDHPPDKKPKSDKASLPSNEFDPTEALVVEKSGNNS
VLAEGKPESCGLVQRCVIIQKDENGFGLTVSGDNPVFVQLVKEDGAAMRAGVQTGDRIIK
VNGTLVTHSNHTEVVKLIKSGSYVALTVLGRPPGLAQIPLPEAEPDILGVSISSPNSPAT
ERPYSPQDRFSLFQSSWEENGSACNQRSDVLQKKLSKEQQDLQAMKEEYSRNPSPKLLKD
IQEAKKHIPQLQGQLLKSTETTQEAVSGGDADDSSMYETDLAHTPKADNSTDLSWSSSPI
FRPVTPESHCPKELSYPSPKSTPRNSFNSCHSPETEDTTDLDSLSPSALSSPSCSRVISQ
IIGAEDDYFGRDQEQTNGQCDSFNSIEQLKSRPAHLAAFLHYVISQFEPAPVLCYLHTEL
YKQTNSKETRRVFMDLHNFFMDRGANLKVAVPESVSSDLDRRRTELIPEEINRQHVQTLQ
DSLLADVEKHLEDFRQKRNMGLTVAEAELARLDQERVRDRVTLERERSYAENIISKIDDI
LLTTQTTEEDKCTTIQFVIYTYMKHLGVRVKEPRNLESKRGLNRLFPKMKHKSIKTDKEV
DDRLKKKFLNLVPQRRPSRIEAAGKNLENRPRPQKQLSQPTLGAVELMDNSRLKGSQSSE
GPELTHSLSVSSPSNTTHSVDANRDADIVSGGTPTSAPSRLSDGLQPDPLDGLAFPDSTE
LYPMEKLPEDDRESDRAHDGTPKAVRKLEALGIGDVQSEDDQGTDSELDPHNWQQLVGRE
VLAGLRPQEIKRQEVINELFYTERAHVGMLKVLDDVFYQRLSKDAILPPADIKNIFTNLE
EVLQLHVSILEQMAAIRKRNDSLVIDLRGDDLLSWFSGAEEEKIKQAVGTFCSNQPFALE
IIKTKQKKDSRFTSFIQEAESNRQCRRLQLKDIIPVEMLRLTKYPLLLDNIVKYTDDPVE
KHKVKQAADCCRKILSHVNQALKESEDKQKLEDYQRRLDLSSLKQTDNPVILELKNLDLT
KKTLIHEGPLSWKMNKDKTIELYTLLLEDILVLLQKQDERLILKCHSKILAGTPDTKHTF
SPIIKLSTVLVRSVATDNKSFFVLSMSDNVAQIYELMAPTVSDQKMWQTLISQRADTMKV
KPHSVIPLPQTDGERDGVEIITAGVSRLSREQDRTSTGSTQSTDKESGPASRSTLQGSLP
AGNPFEEEKADVEEEEGFLDPELSCEVSEVDREGDSFDVFPSRADEALKTLAALKQVLVN
QLMSQEAAQQTKRSTGARLLRTTSLRTPTDNRAKVMAHNGSEKSTSKAEDLAQDLGSGDT
GFFDSPEDYGCLVLEGYGGQGESSTDDDILASTQGKQLRTSQGCAADSGINLRFSSTSQF
GSLSTFSRQVLSHLRHLQTSLGYLKEVETKYNNLIRQRTDRPSTDTDGNKDKR
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacccacagttcagttccactgacaggtttaccaagaaagcgataagaaccagc
agcattctcagtaaggaccatcccccagacaagaaacccaaaagtgacaaagcttcactt
ccctccaatgagtttgaccctacagaagctctggtggtggagaagagtggcaacaacagt
gtgcttgcagagggaaagcctgaatcctgtggtctggtccagcgatgtgtgatcattcag
aaagatgaaaatggctttgggcttactgtcagtggtgacaaccctgtgtttgtgcagctg
gtcaaagaagatggggctgcaatgcgggcaggtgttcagacgggagacaggatcatcaag
gttaacgggacccttgtcacacattctaaccacacagaagtagtgaaacttatcaaatcg
ggctcctacgtggcgctcacggttttggggcgccctccaggactagcccagatcccgttg
cctgaagcagagcctgacatcttgggtgttagcatatcctctccaaactctccagcaaca
gagcgcccctacagtcctcaggaccgcttctccctcttccaatcatcatgggaagaaaat
ggcagtgcctgcaaccagaggtctgatgtcttgcaaaagaagctctcaaaagaacagcag
gatctacaggcaatgaaagaggagtacagcaggaacccctcccccaaactactgaaggac
atccaggaagctaaaaaacacattcctcagctgcagggtcagctcttaaagtccactgaa
acaacacaggaggctgtttcaggtggcgatgcagacgacagtagcatgtacgaaacggat
ctcgcacacacccctaaagcagacaatagcacagatctatcctggagcagctctcctata
tttagaccagtgactccagaaagccattgtcctaaagagctctcctaccccagcccaaag
agcacaccccgaaacagcttcaactcctgccactccccagagacggaggacaccactgac
ctggactctctgtcaccctccgcactcagcagtccctcctgttctcgcgttatctcgcaa
attattggagctgaagatgactattttggtcgagaccaagagcagacaaacggccagtgt
gacagctttaacagtattgagcagctcaagtctcgccctgctcacctcgcagcctttctg
cactatgtcatctctcagtttgaacctgctcctgtgttgtgctacctccataccgagctc
tacaagcagaccaactccaaagagacccgacgggttttcatggacctccacaattttttt
atggaccggggagcaaatttaaaggttgctgttcctgaatctgtttcctctgatcttgat
cggcggcggacggagctgataccagaggaaataaataggcaacatgttcaaacactgcag
gactctctgctagctgacgttgagaaacacctcgaggactttaggcagaagcgcaatatg
ggcctaacggtggctgaagctgagctggccagactggaccaagagagagtccgagatcgt
gtcacgcttgagcgagaacgttcatacgctgaaaacatcatatctaaaatagatgatatt
cttttaactactcagaccacagaggaagacaaatgcactacaatacagtttgttatctat
acatacatgaagcacctcggtgtgagggttaaggagcctcgaaatctggagtccaaacgg
ggtctgaaccgtcttttccctaagatgaagcataaaagtattaaaacagataaagaagtt
gatgacagattaaaaaagaaatttttaaatcttgtacctcagcgccgacccagccgcatc
gaagcagcaggcaaaaacctggaaaatcgccccaggcctcagaaacagctgtctcagcca
acgctaggagcggttgagctaatggataacagtcgtctgaagggcagccagtccagtgag
ggccccgaactcactcattccttgtctgtctcatctccaagtaacaccacccacagtgtg
gatgcaaaccgagacgctgatattgtttcaggtgggactccaacatcagccccctccagg
ctgagtgacggtcttcagcctgatcctctggatggattagctttccctgattcaactgag
ctttatcccatggagaagttaccagaagatgacagagaaagtgacagagctcatgacggg
acaccaaaggcggttagaaaacttgaggcactgggtattggagatgtccagagcgaggat
gatcaggggacagactctgagctcgatccccacaactggcagcagctggtgggacgagag
gtccttgcaggactcaggcctcaagagattaagagacaagaagttataaacgagttgttt
tatacagagcgtgcacatgtagggatgctgaaagttctggatgacgtcttctaccagagg
ctttccaaagacgcaatccttcctcctgctgacatcaagaacatcttcaccaacctggaa
gaggtcctgcagctgcatgtttcaatacttgagcaaatggcagccatacggaagagaaat
gattcgttggtaatagatttaaggggggacgacttgctctcgtggttcagtggtgcagag
gaggagaagatcaagcaggcagtgggaacattttgcagtaaccagccatttgcactggag
attatcaagaccaagcagaagaaagactcgaggttcacctcattcattcaggaggcagag
agtaacagacagtgtcgaagactgcagctaaaggacataattcctgttgagatgctgcgg
ctcaccaagtaccccctgttgttagacaacattgtcaaatacacagacgatccagtggag
aagcacaaagttaagcaggcagcagactgctgtagaaagatccttagtcacgtcaaccag
gctttaaaagagtctgaggacaaacagaaattagaggactaccagagaagattggacctc
tcctctctaaagcagacagacaacccagtgatccttgagctaaagaacctggatttgacc
aagaagacactgattcacgagggccctctatcatggaaaatgaacaaggataagactatt
gagctgtacacgctcctcctggaggacatccttgttctgctacagaaacaagacgagcgt
ctgatcctaaaatgtcacagcaaaatcctggcaggcaccccagatacaaaacacaccttc
agccccatcattaaactcagcactgttctggtgcgctctgtggctacagacaacaagtcc
ttcttcgttctctccatgtctgacaacgttgcacagatttacgagctcatggcgcccaca
gtctcagatcagaaaatgtggcagactctgatctcccaaagagccgatacgatgaaggtc
aaacctcacagcgtcataccgttacctcagactgatggggagcgagacggcgtggagatc
attacagcaggtgtttccagactgagcagagaacaagaccgcacatccactggcagcacg
cagtccacagataaagagagcggcccggcctctagaagtaccctgcaaggttctctacct
gctggtaacccgtttgaggaagaaaaggcagacgtggaggaagaggaaggttttctggac
ccagagctttcgtgtgaagtatctgaagttgacagagaaggagactcgttcgatgtgttc
ccctcaagggcagatgaagcactaaaaacattggctgcattaaagcaagtcctggtgaac
cagctgatgtcccaggaggcagcacaacaaaccaaacgttccacaggagcccgtctccta
agaaccacctctttgcggacgccgacagacaaccgcgcaaaggtgatggcccacaacggc
tccgagaagagcacctctaaggcagaggacctggctcaggacctggggtcaggggacact
ggattctttgattctcctgaagattatggatgtttagtcctggagggttacggaggacaa
ggggagagcagcacagacgacgacatcctggcatcaacccaagggaaacagctgaggacc
tcacaaggctgtgcggccgattccggcatcaatttgagattttcttcaacgtcacagttc
ggcagcctctccactttcagcagacaggtgttgtctcaccttagacatcttcagaccagc
ctcggctatttaaaggaagttgagaccaagtacaataatctaatacgccaaaggacagat
aggccatcgacagacacagatggaaacaaagataaaagatag
DBGET
integrated database retrieval system
