Xiphophorus maculatus (southern platyfish): 102235333
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Entry
102235333 CDS
T02923
Symbol
cldn1
Name
(RefSeq) claudin-1
KO
K06087
claudin
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03272
Virion - Hepatitis viruses
xma04382
Cornified envelope formation
xma04514
Cell adhesion molecules
xma04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
102235333 (cldn1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
102235333 (cldn1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
102235333 (cldn1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
102235333 (cldn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xma03037
]
102235333 (cldn1)
04147 Exosome [BR:
xma04147
]
102235333 (cldn1)
04515 Cell adhesion molecules [BR:
xma04515
]
102235333 (cldn1)
Cilium and associated proteins [BR:
xma03037
]
Other cilia and associated proteins
Stereociliary proteins
102235333 (cldn1)
Exosome [BR:
xma04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
102235333 (cldn1)
Exosomal proteins of colorectal cancer cells
102235333 (cldn1)
Cell adhesion molecules [BR:
xma04515
]
Immunoglobulin superfamily
L1 family
102235333 (cldn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Clc-like
DUF1461
G7C_C
ZNF512_C2HC
DUF6223
SLATT_3
Motif
Other DBs
NCBI-GeneID:
102235333
NCBI-ProteinID:
XP_005808297
Ensembl:
ENSXMAG00000014724
UniProt:
M4AJW3
LinkDB
All DBs
Position
18:complement(26074..29153)
Genome browser
AA seq
223 aa
AA seq
DB search
MGVCLQVLGLVLGVVSWCLQSSSTSSHTWKVRSQAETVTTSSWQFEGLWMSCAATALGSV
QCSRFKTVLGLDSHLQACRALMILSLILGLVSIIVSILGLKCTKIGRMAEQVKEQVALSG
GILFILSGVFTLTAVSWYAARVINEFYDPFHAGLKFEMGTGLYLGWASSGLAILGGSLLC
CSCRRSTYTPPLRQFSYHSSSSGGQNIYKAAPASESSSSKAYV
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgtgtctccaggttctgggtctggttctgggcgttgtgtcttggtgtctgcag
tccagctctacgtcctctcacacttggaaggtgcgtagccaggcagagacggtcaccacc
agctcatggcagtttgaaggcctgtggatgagctgcgccgccacggcgctcgggtccgtc
cagtgcagcaggttcaagacggtcctgggcctcgactctcatctgcaggcctgcagagct
ctgatgatcttgtccctgatcctcggtctcgtctccatcattgtctccattcttggactc
aaatgcacgaagatcggccggatggcggagcaggtcaaggagcaggtcgccctgagtgga
ggcatcttgttcatcctctctggtgtcttcaccctgacggcggtctcctggtacgccgcc
agagtcatcaatgagttctatgacccgttccacgccggactgaagtttgagatgggtact
ggtctgtacctgggctgggcgtcctctggtctggccatactgggaggatctctgctgtgc
tgcagctgcaggcggagcacctatacaccccctctgaggcagttctcctaccactccagc
tccagtggcggtcagaacatctacaaagcggctccggcctcagagagcagcagctccaaa
gcgtatgtctga
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integrated database retrieval system
