Xiphophorus maculatus (southern platyfish): 102235353
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Entry
102235353 CDS
T02923
Symbol
rnf4
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4 isoform X1
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xma04121
]
102235353 (rnf4)
Enzymes [BR:
xma01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102235353 (rnf4)
Ubiquitin system [BR:
xma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102235353 (rnf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-RING_4
zf_RING_Vps8
zf-rbx1
zf-C3HC4_4
Rtf2
Prok-RING_4
zf-RING_6
TRAF3_RING
zf-UDP
zf-RING_10
zf-P11
zf-RING_11
PD-C2-AF1
zf-RING_16
zf-ANAPC11
Zn_ribbon_6
IBR_1
DZR
HypA
Motif
Other DBs
NCBI-GeneID:
102235353
NCBI-ProteinID:
XP_005812334
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All DBs
Position
23:554291..561343
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AA seq
196 aa
AA seq
DB search
MSSSVSRLDLQPPDQAQRKRRPAGSSLVSRTKTSRAVSGRPRRTAGARDHAPPTEPIDVM
DGAEDGVEEVVDLTCEGSESAVVDLTTNNESELLVDEGPPGESYVLSSDEDEDAPTVVQA
AITSTAHTSRLTPGLISCPVCLDLYSEIVESGRLVVSTKCGHVFCSQCLRDALTSSHTCP
TCRKRLTSRQYHPLYI
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgagcagctcggtgagtcggttggatctgcagccacctgatcaggctcagaggaagcgg
cggcccgccggaagctctctggtctccagaaccaagaccagcagagcagtcagtggtcgg
ccccgcaggacagccggtgccagagaccacgccccccccacggagcccatcgacgtgatg
gacggcgccgaggacggtgtggaggaagtggtggacctcacctgcgagggatcagagtct
gctgtggttgacctgacgaccaacaacgagtcggagctgctggtggacgaagggcctccg
ggtgagagctatgtactcagcagtgatgaagatgaagacgcgcccactgtcgttcaagct
gccatcacctctactgcacacacatccaggttgactccaggtctcatcagctgccccgtc
tgtctggacctgtactccgagatcgtagagagcgggcgattggtcgtctccacgaagtgc
ggccacgtgttctgcagccagtgtctgagggacgctctgacatcatcacacacctgcccc
acctgcaggaagcggctcacttcgcgccagtaccaccctctttacatctga
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