Xiphophorus maculatus (southern platyfish): 102235547
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Entry
102235547 CDS
T02923
Symbol
gars
Name
(RefSeq) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
102235547 (gars)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
xma01007
]
102235547 (gars)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xma03016
]
102235547 (gars)
03029 Mitochondrial biogenesis [BR:
xma03029
]
102235547 (gars)
Enzymes [BR:
xma01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
102235547 (gars)
Amino acid related enzymes [BR:
xma01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
102235547 (gars)
Transfer RNA biogenesis [BR:
xma03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
102235547 (gars)
Mitochondrial biogenesis [BR:
xma03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
102235547 (gars)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
WHEP-TRS
tRNA-synt_2b
OS-D
DUF5915
Motif
Other DBs
NCBI-GeneID:
102235547
NCBI-ProteinID:
XP_005797884
Ensembl:
ENSXMAG00000009402
LinkDB
All DBs
Position
21:10279053..10285305
Genome browser
AA seq
751 aa
AA seq
DB search
MLLLRIAASALLRTTTEIPSLCPLVTARFVRLSLRHPPGRRPFSASGCVCSKKQRSLWLQ
LTEGQTMGDGNFEEILAPLRQAVKEQGDLVRKMKQEGAPDVDVTKAVAELKARKRTLEAK
ELSLQPKDDIVDRTKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNILQVWRQH
FIQEEQILEIDCTMLTPEPVLKTSGHVEKFADYMVKDVKNGECFRADHLLKAHLQKLMSD
KKCAAEKKAEMDSVITQLDNYSQQELTDLFVKYNVKSPTTGNELTAPISFNLMFQTSIGP
GGNMPGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTM
AEIEHFVDPNEKVHPKFSSVADLDIMLYSSKAQTSGQSAHIMRLGDAVEQGVINNSVLGY
FIGRIYLYLTKVGVAKDKLRFRQHMDNEMAHYACDCWDAETKTSYGWIEIVGCADRSCYD
LKCHARATKVPLVAEKPLKEPKTVNVVQFEPNKGAIGKAYKKDAKLAMEYLAVCDECFIA
EQEQLLNDNGEFTIETEGKTFKLTKEMVGVKRFQKTLHVEEVVPSVIEPSFGIGRIMYTI
FEHTFHIREGDEQRTYFSFPATVAPYKCSVLPLSQNQEFMPFVKELSEAMTKNGVSHKVD
DSSGSIGRRYARTDEIGVAFGITIDFDTVNKTPHTATLRDRDSMRQIRAEVNKLPVIVRD
LANGTLTWAEVESEYPIFEGQETSKKETIEE
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgcttcttctccgcatcgctgcatcagctctgctgaggaccaccactgagattccctcc
ctctgtccgctagtcactgcccgcttcgtccggttgtcgctccgccatccccccggaaga
aggcctttttcagcgtcgggctgtgtgtgtagtaagaagcagaggagcctctggctgcag
ctcacggaaggacaaaccatgggggacggcaactttgaggagattctcgcccctttgagg
caggcagtcaaagaacagggggacctggtacgcaaaatgaaacaggaaggagctcctgat
gtagatgtcaccaaagccgtcgcagaattgaaagcaaggaagaggactttagaggccaag
gagctgtcgctgcaacccaaagatgatattgttgacagaaccaagatggaggacactctg
aagaggcggttcttctatgatcaggcttttgccatctatggaggtgtgagcggcctgtat
gactttggccctgttggctgtgccctgaagaacaacatcctgcaggtgtggaggcagcac
ttcatccaggaggagcagatcctggagatcgattgcaccatgctgactcctgagcctgtc
ctcaagacatctggacacgtggaaaagtttgcagactatatggtgaaagatgtcaaaaat
ggtgaatgcttcagggctgaccaccttctgaaagctcatctccagaagctcatgtctgat
aagaaatgtgcagctgagaaaaaggcagagatggacagtgtcatcactcagttggacaac
tactcccaacaagagctgacggacctttttgtgaaatacaacgtcaagtctcccaccaca
ggaaatgagctcaccgctcccatctccttcaatttgatgtttcagacatccatcggacca
ggagggaatatgccaggctatctgaggcctgaaactgctcagggaatcttcctcaacttt
aagcggctccttgagttcaaccaggggaaacttccctttgccgctgctcagattggaaac
tctttccggaacgaaatctctcctcgctctggactcattcgggttagggagttcaccatg
gctgagatcgagcactttgtggatccaaatgagaaggtccatcctaaattctccagtgtg
gcagacctggacatcatgttatactcatccaaagcacagacaagtggccagtcagcccat
atcatgaggctgggagacgctgtggaacaaggagtgattaataactctgtcctgggatat
tttattgggaggatttacctctaccttacgaaagttggtgttgccaaagataagctgcgt
ttccgacagcacatggacaacgagatggctcactatgcctgtgactgttgggatgctgaa
accaagacctcctacggttggattgagatcgtgggctgtgccgaccggtcttgttacgat
ctgaagtgtcatgcaagagccacaaaggtcccgctagttgccgagaaacctctgaaagag
cctaaaaccgttaatgtcgtccagtttgagcccaacaaaggagcaattgggaaggcttat
aaaaaggatgctaagttagcaatggaatatctggcggtgtgtgacgaatgcttcattgca
gagcaggaacagctgctgaatgataatggagagttcacaatcgagactgaagggaagacc
tttaaactcacaaaggaaatggtcggagtaaagagattccagaagaccttgcatgtggag
gaagttgttcccagtgtcattgaaccctcctttggaatcggtagaatcatgtacaccatc
tttgaacacacattccacatcagagaaggcgatgagcagagaacgtactttagcttccct
gcgactgtagctccatacaaatgttctgtcttacctctgagccaaaaccaagagttcatg
cctttcgtgaaggagctatccgaggccatgaccaaaaacggcgtgtcacacaaggtggac
gactcctccggatccatcgggaggcgctatgctaggacagacgagatcggcgtggcattc
ggcatcaccattgactttgacacggtgaacaagacgcctcacacggccacactgagggac
cgtgattcaatgaggcagatcagggctgaggttaacaagttgccggttattgttcgcgat
ttggccaacggcaccctgacctgggcagaagtggaaagcgagtatcccatctttgaggga
caggagacgagtaaaaaggagacaattgaggagtag
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