Xiphophorus maculatus (southern platyfish): 102235553
Help
Entry
102235553 CDS
T02923
Name
(RefSeq) afadin-like
KO
K05702
afadin
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04517
IgSF CAM signaling
xma04520
Adherens junction
xma04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102235553
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
102235553
04530 Tight junction
102235553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DIL
PDZ
RA
PDZ_6
PDZ_2
RA_2
RA_3
RASSF8-10_RA
DUF6288
Motif
Other DBs
NCBI-GeneID:
102235553
NCBI-ProteinID:
XP_014324307
LinkDB
All DBs
Position
19:complement(24765800..24779741)
Genome browser
AA seq
1199 aa
AA seq
DB search
MPEAKEREKLAEAISQWNSDRLDLFEISQPDEDLVFHGVIRFSFEDHKEEGSVATKCLRV
CSSLTTREVIETLSEKFRPDMKMLSTKYSLYEIHADQERRLDLDERPLVVQLSWTSDNRE
GQFVLKKDQERLEESYYEKEKEGLLQTIKRTLSRKGKKKEESRASGAERASEGEDGPAED
LLNNSDRSSSLEPLRRCEKHKRNQIPEDSSDQPGLPVRVKICDDAEEPFLSAVINYTNSS
TVHFKLSPAYTLYAASRFALRRRRSGGSPSSASTHPVTSITNKMATMMGKVIQRHRAVAG
VLAFWLANSSELLNFLKNDKDLGPFTKQSQLDLSHQVHNAYSFLLRCLQGELRKHLPTFL
TDPERHGALPAGIEMVLDTLMNAMSLLRRCRVSPALTIQLFSQLFHFISAWLFNQLMAPE
PGTPGLRSHYWGAALRQRLTPIEAWAERQGLELAADCHLGHITQATTLLTMNKYSASDAK
DIQTSCFKLNSLQLRMLMDGYMYGPSEPQIPPDLTDAVAKAAKASADSLIHSDGGALRAT
ESLDLLLPFLLPQGGYSCETLRGVPQGFREFLEPICQKGLCCLTSVADSQGDWTLHFTEN
THTDGDFYLAAHRQPEVEKVTLHKPLNSGMGVSIVAAKGAGQSDLGIYVKSVVRGGPAEM
SGKLAAGDQLLSVDGHSLVGLSQDSAAAIMMRTGPVVSLQVEKFAAIYRGLGNLLNESSP
ENETSSSHLRLDGVSTLYCVVDLSPSERNHGGRKRNKDQRTQKYRQLYRSDPNVTAGFCP
EDQGELFDPGVRGNGFSSVSSDNLCADTHPREYLTLPNSKSQDKSDFEPKRPTQPFTMAV
NPSSEQSDGRRGFMRHAVSQESLCADAGGPLLGQKQNALTQRNQSSSQSTNFCRSVALRS
SVSTHYVPSDRKQPPRSPAGVWRNPFSQQATPTPSVRPIRIDIPVAVSRAGGAQSNPPLT
TFQPSPSVLNRLRKASEQTKSSPSRACPSSAAKALLQPLVLWQQQRSEKPRLCITPTKPV
SFQEPPSERKGSGPGGQSDPQVLLRGPWRREVQEVVERLEREARQLRAKEQQSDEEDRLR
RLDLEWRFQKRVQEIQQRGEGEEEEEEEDLDVMMILQQLDRTSENKIGSVGNINRKQNEE
EKHGGNQHSYKQEGKPDHRENGLKAASDEKPAEKIKMASAPEKLTLRERRRLFSLATSA
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgccggaggcgaaggaacgggagaaactggccgaggccatcagtcagtggaacagcgac
agactggacttgtttgagatcagccaacctgacgaggacctggtgtttcatggcgtgatc
cgcttctccttcgaggatcacaaagaagaaggcagcgtggccacaaagtgcctgcgggtt
tgcagcagcctgacgactcgcgaggtcattgagacgctttcagagaagttcaggccggat
atgaaaatgctgtcgacaaaatattctctctatgagatccacgcagatcaagaacgtagg
ttggacctggatgagagacctctggtcgtacagttgagctggacctcggacaaccgagaa
gggcagtttgtgctcaaaaaagaccaggagagattggaggaaagttattatgagaaagaa
aaagaaggccttcttcaaaccatcaagaggacactgtcaagaaaagggaaaaagaaagag
gaaagccgagccagcggagcagagagggcgtcagagggcgaggacggaccagctgaagat
ctgctgaacaacagtgaccgctcgtccagccttgagcctctgagacgttgtgaaaaacac
aaaagaaatcagattcctgaagactcttcagatcaacctggattaccggttagagtaaag
atctgcgacgatgccgaggagcccttcctgtccgcagtcataaattacaccaacagctcc
acggttcacttcaagctgtcccccgcttacaccctctacgctgcgagtcgcttcgccctg
cggcgccggcgcagcggaggctctccgtcgtctgcaagcacgcaccccgtaacgtcaatc
acaaacaaaatggccaccatgatgggaaaggtcatccagaggcaccgggccgtcgccggg
gttctcgccttctggttggccaattcctcggagctgctgaactttctgaagaacgacaaa
gacctcggcccgttcacgaagcaaagtcagctggatctgtcccaccaggtgcacaacgcc
tacagcttcctgctccgttgcctacagggtgagttgaggaaacacctaccaactttcctc
actgatcctgagcgacacggcgctctcccagccggcatagagatggtgttggacaccttg
atgaacgccatgtctcttctgcgccggtgccgcgtcagcccggccctcaccatccagctc
ttctctcagctcttccacttcatcagcgcctggctgtttaatcagctcatggcgccagag
cccggcacgccgggcctgcgctctcactactggggggccgcactgcgtcagaggctgacc
cccatcgaggcctgggcggagaggcagggcctggagctggctgccgactgccatctggga
cacataacgcaggcgaccacgctcctgacaatgaataagtactcggcttcggacgctaag
gacatccagacttcctgtttcaagctgaactcgctgcagctgcgcatgctgatggacggg
tacatgtacggacctagcgagcctcagatcccccctgacttgacggatgccgtggcgaag
gctgccaaggcctcggccgatagcctgattcacagcgacggtggcgcgctccgggcgacg
gagagcctcgacctgctgctgcctttcctgctgccgcagggaggatactcctgtgagacg
ctgagaggagtccctcaggggttcagagagtttctggagccaatctgtcagaaaggtctc
tgctgtttgacatctgtggctgattcccaaggagactggacgctgcattttactgaaaac
acacacaccgatggggatttctacttggcagcgcacaggcagcccgaggttgagaaggtc
actttgcacaagcctctgaacagtgggatgggagtcagtattgtggcagccaagggagca
ggccagagtgacctcggcatctacgtcaaatctgtggtccggggaggacccgccgaaatg
agcggtaagctggcagctggagatcagctgctcagtgtggacggtcacagcctggtcgga
ctcagccaagacagcgcagcagccatcatgatgcgcaccggccccgtcgtcagcttacag
gtggagaagtttgcagcgatttaccgaggtctcgggaacctactgaacgaatcgtccccg
gaaaacgaaacaagcagcagccatttaagactggacggcgtttccacactatactgcgtt
gtggatctcagcccctcggagagaaaccacggaggccgcaagagaaacaaagaccagagg
acgcagaaataccgacagctttatcgctccgaccccaacgtgaccgctggcttttgcccg
gaggaccaaggtgaactctttgaccccggcgtgagaggaaatggcttttcatccgtttcc
agcgacaacctttgcgccgatacgcatcccagagaatacctgacgctgccgaactctaag
tcccaggacaagtctgattttgagccgaagcggccgactcaaccgtttacgatggctgtg
aatccttcaagtgagcagagcgacggcaggagaggcttcatgcgtcacgctgtgtctcag
gagagcttgtgcgcagacgctggaggccccctgctgggccaaaagcagaatgcgctcaca
cagaggaaccagagttccagtcagtcgacaaatttctgccgatccgttgctctccgctca
agcgtttctacacactacgtcccgtccgaccgcaaacagccgccccggagtccggccggc
gtctggaggaacccgttttcgcagcaggccacgcctacgccgtcggtccggccgatacgc
atcgacatccccgtcgccgtctccagagcaggcggcgcgcagtcaaatcctcctctcacc
accttccagccgagcccctctgtgctgaaccggctccgtaaagccagtgagcagacaaag
agctccccaagccgagcgtgtccatcatcagcggccaaggcgctgctccagcccttggtt
ctctggcagcagcagaggtcagaaaaaccccgattgtgcatcactccaacgaagcccgtt
tccttccaggagcctccgtccgagcggaagggctcggggccgggcggccagagcgacccc
caggtcctgctgcgtggcccctggaggagggaggtccaggaggtggtggagcggctggag
agggaggcacggcagctccgagccaaggagcaacagagcgacgaggaggacaggctgcgg
aggctggacctggagtggaggtttcagaagagggtgcaggagattcagcagagaggagag
ggagaagaagaggaggaggaggaagatctggacgtcatgatgatcctgcagcagctggac
agaacatcagagaacaagatcggatccgttggaaacatcaacaggaaacaaaacgaggag
gaaaagcacggagggaatcagcattcctacaagcaagaagggaaaccagatcacagagaa
aatggactgaaagcagcgtcagatgagaagccggcggagaaaatcaagatggcatcggct
cctgagaagctcacattaagggagcgtcggcgtcttttctccctggcaacaagcgcttaa
DBGET
integrated database retrieval system
