Xiphophorus maculatus (southern platyfish): 102235705
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Entry
102235705 CDS
T02923
Symbol
usp39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102235705 (usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xma03041
]
102235705 (usp39)
Spliceosome [BR:
xma03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
102235705 (usp39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
102235705
NCBI-ProteinID:
XP_023199510
Ensembl:
ENSXMAG00000017793
UniProt:
M4ATP6
LinkDB
All DBs
Position
12:17287739..17292729
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AA seq
499 aa
AA seq
DB search
MISLKRERDNEEDDDDHEDGVAAKRGRGRAGEDRRSRHCPYLDTINRSVLDFDFEKLCSI
SLSHINVYACLVCGKYFQGRGQKSHAYTHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSL
EDITYVLKPTFTKKHIAALDKHGKLYRAYDGTTYLPGIVGLNNIKANDYANAVLQAFSNV
PPLRNYFLEEENYKGIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLC
SKKTFQITKQGDAVDFMTWFLNALHGALGGTKKKSSIITKVFQGSMRIFSKKLPHPDLPP
EEKEALLLTEEYQEQMSESTFLFLTLDLPTAPLYKDEKEQLIIPQVPLFNILGKFNGNTE
KEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLSEYLTEE
AQATEKNTSYDLVANIVHDGKPTEGSYRIHVLHHGTGKWYEMQDLQVIDILPQMITLSEA
YIQIWKRQESSDTNNHRGV
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgatttctttgaagcgcgagagagataatgaggaggatgacgatgatcacgaagacggg
gttgctgccaaaagaggccgaggacgtgcaggagaagaccgtagaagccgccattgtccg
tatcttgacaccataaacaggagtgtgctggattttgacttcgagaagctctgctctatc
tccctttcgcacatcaacgtgtatgcttgtctcgtatgtgggaagtactttcaaggcaga
ggtcagaagtctcatgcatatacccacagtgtacagtttagccaccacgtgttcctcaac
ctgcataccctcaagttctactgtctgccagataactatgagatcattgactcttcccta
gaggacattacatatgtactgaaaccaactttcaccaagaagcacattgcggcattggac
aagcatggtaagctgtacagagcctatgatggaacgacttacctgccaggcatcgtgggg
ctcaacaacatcaaagccaacgactacgccaatgcggtgctacaggctttttcaaatgtt
ccacctttgcgaaactacttcctggaagaggaaaactacaagggaatccgcaggccacca
ggggacatcatgtttctcctggtccagaggtttggggagctgatgcgcaaactttggaat
ccaagaaactttaaggcgcacgtgtccccacatgagatgctgcaggccgtcgtgctgtgc
agcaagaaaacatttcaaattactaagcagggtgatgctgtagacttcatgacgtggttc
ttgaatgccctgcatggagctcttggaggcacaaagaagaagtcatcgatcatcacaaaa
gtttttcaaggctccatgcgaatcttctctaagaaacttccacacccagatttgccacct
gaagaaaaagaggcgctgcttctcacagaggagtaccaggagcagatgtcagagtccacc
ttcctgttcctgacccttgacctcccaacagctcctctctacaaagacgaaaaggagcag
ctgattatccctcaagttcctctcttcaacatccttggcaaattcaatggcaatactgaa
aaggaatacaaaacctacaaagagaatttcctcaaacggttccagctgaccaagttgcca
ccttacctcatcttttgcatcaaaagattcaccaagaacaacttctttgtggagaaaaac
ccaacaattgtcaacttcccaatcaccaacgtagacctttctgagtacctcacagaggaa
gctcaagctacagagaagaatacttcctatgaccttgttgcaaacattgtgcatgatgga
aaaccaactgaagggtcctacagaatacatgtcctgcatcatgggacgggaaagtggtac
gagatgcaagacctgcaagtgatcgacattctcccccagatgatcacattgtcagaggcc
tacatccagatttggaaaagacaagagagcagtgacacaaacaaccacagaggggtgtaa
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