Xiphophorus maculatus (southern platyfish): 102235796
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Entry
102235796 CDS
T02923
Name
(RefSeq) cysteine protease ATG4D
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04136
Autophagy - other
xma04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102235796
04136 Autophagy - other
102235796
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xma01002
]
102235796
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xma04131
]
102235796
03029 Mitochondrial biogenesis [BR:
xma03029
]
102235796
Peptidases and inhibitors [BR:
xma01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
102235796
Membrane trafficking [BR:
xma04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
102235796
Mitochondrial biogenesis [BR:
xma03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
102235796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
102235796
NCBI-ProteinID:
XP_005797627
Ensembl:
ENSXMAG00000007016
UniProt:
M3ZXU5
LinkDB
All DBs
Position
5:10208642..10214958
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AA seq
499 aa
AA seq
DB search
MNSVSPSAAQYMGVVMQDEQVESRRPPSLERQGSFGFRGPQASDASRDTAREPDEMDKVK
AKLMSAWNNVKYGWTIKTKTSFNKISPVTILGHSYLLNNEDEVERFRRDFVSRIWLTYRR
EFPLLEGSTWTTDCGWGCMLRSGQMLLAQGLVVHLMPRDWTWPDALQLTDVDFEVFRPRS
PVRAGGVPIPSFGSLRGSSSPEKTPAGSQAPRCCQRKRPESARDRQAEPIHSKLITWFGD
QPPAPFGVHQLVEIGKSSGKKAGDWYGPSIVAHILRKAVAKTPVAQSLAVYVAQDCTIYK
EDVVHLCDLSLSQSPADPSDQAWKSVIILVPVRLGGEALNPSYIECVKNILKLDCCIGII
GGKPKHSLYFIGFQDEQLLYLDPHFCQPVVDVAQADFSLESFHCSSPKKMPFSRMDPSCT
IGFYAKNKKDFESLCAAVGMALSSSKEKYPIFTFVEGPGQDYGLEGDSSNHSGPSAHILP
PDTLSRSNNRRSSEEFVFL
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaactcggtttcccccagcgcagcgcagtacatgggggtagtgatgcaggatgagcag
gtggagagccggaggccgccgtccctggagcggcagggcagctttggattcagagggcct
caagcttcagatgcaagcagagatacagccagagagcctgatgagatggacaaagtcaag
gccaaactgatgtcagcatggaacaatgtcaaatatggttggactattaaaactaaaacc
tctttcaacaaaatatctcctgtcacaatcctggggcactcttatctactcaacaatgaa
gatgaggtggagcggttccgtcgggattttgtgtccagaatatggctgacctaccgtagg
gagtttcccctgctggaaggctctacctggacaacagactgtggctggggctgcatgctg
cgcagcggacagatgctgctggcacaggggcttgtggtccacctgatgcccagagattgg
acttggccagatgctctgcagctaactgatgtggacttcgaggtattccgacctcgttcc
ccagttcgggctggaggggttcctatcccgtcctttggttctttgcgaggatccagcagc
ccagagaaaactccagctggcagtcaggcgcccagatgctgccagagaaagagacctgaa
tctgccagggaccggcaggcggagcccatccactccaagctaatcacctggtttggagac
cagcctccagcaccttttggtgttcaccagctggtggaaataggcaaaagttcagggaag
aaggctggcgactggtacggcccatcgatagttgcgcatattcttcggaaagcagtagcc
aaaacccctgtggcacaaagcctagctgtatatgttgctcaggactgcacaatatacaaa
gaggatgtggtgcatctctgcgatctgtcactaagtcagagtcctgctgatccttccgac
caagcctggaagtctgtcatcatactggtccctgtccggctcggaggagaggcccttaac
ccgtcttacattgagtgtgtcaagaatatcctgaagctggattgttgtattggaataatt
ggagggaaaccaaagcactcactctacttcattggcttccaagatgagcagcttctctat
ctggatccacacttctgccaaccggttgtcgatgtcgctcaagcagacttctcactggag
tcgttccactgcagctcccctaaaaagatgcccttcagccgcatggatcccagctgcacc
atcggcttctatgccaagaacaagaaggactttgagtctctatgtgctgctgttggcatg
gctctgtcctcatccaaggagaaataccccatcttcaccttcgtcgaggggccggggcag
gactatggacttgagggtgacagcagcaaccacagtggaccctcagcccacatcttgcct
ccagacacactgagcaggagtaacaacagaagaagcagtgaggagtttgtcttcctgtga
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