Xiphophorus maculatus (southern platyfish): 102235982
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Entry
102235982 CDS
T02923
Symbol
dcaf1
Name
(RefSeq) DDB1- and CUL4-associated factor 1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
xma01001
]
102235982 (dcaf1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xma04121
]
102235982 (dcaf1)
Enzymes [BR:
xma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
102235982 (dcaf1)
Protein kinases [BR:
xma01001
]
Serine/threonine kinases: Other
Other
102235982 (dcaf1)
Ubiquitin system [BR:
xma04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
102235982 (dcaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
WD40
ANAPC4_WD40
Beta-prop_WDR19_1st
LisH
Beta-prop_WDR90_POC16_2nd
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
102235982
NCBI-ProteinID:
XP_023192546
Ensembl:
ENSXMAG00000015781
LinkDB
All DBs
Position
1:complement(19679030..19694150)
Genome browser
AA seq
1564 aa
AA seq
DB search
MASASASVDSKAELTALLEQWEREQQGNTQELVNILTKISELVEKETEEYHKADPDPFDD
RHPGRADPEGMLGHLLKILFKNDEFMNTLVNSYVMTSREFSLNAAACRLLQNIMPGLETA
VVFQEKEGIVERLFKWAQEAEQPLRIYATGLLAGAMENQDIAANYREENSVLVPLMLHRL
RELQDKDAENKREIKRPSPRKILSEPLLPLDEEAVDGGFEDKPFSPCKNADEKEAVGPQG
DAEVPFSSAEPENELSFRFSSPHRTSSRASSAVKTMMKPMSAPGSLTHPGMSDGSGYLRR
RMERDNARTSKQKLNFSLPEPERNLSELSNSSWSEMSPWVIGNNYHLDPLTPEIEQRLIL
QYLTPLGEYQELLAVFMQMGARELLMHYMDLKQTNDVQLTFEALKYLASLLLHKKFAAEF
VAHGGVQKLLEIPRPSMAATGVSLCLYYLAYNQDAMERVCMLPHSVLSDVVGYTLWLLEC
SHASGCCHATMFFSISFSFRAVLELFDKQDGLRRLVNLISTLEILNPEDQGALLSDDEIF
SSRQRAKHTCMALRRYFEAHLAIKVEQVKQSLQRTEGGALIHSQPYYKAVSYSREQVVEM
MEFLIEYGPLRLYWEPAEVFHKLSCVQLLLQLISIACDWRTYYGRSDTVRYALDILSILT
VVPKTQLLLSEPVAVLDEGGSTVSTVGMSIVLAVAEGEVFVNDAEIQKSALQVVINCVCA
PDKRMSSIGKFIAGTPRRRLPQQTKANESVLTKMWNVVQSNNGIKVLLSLLTVKMPITDA
DQIRALSCKALVGLSRSSSVRQIISKLPLFSSGHIQQLMKEPVLQDKRSEHVKFCKFAAE
LMERISGKPLLIGTDVSLAWLQRANVVAQSKITFPEKELLLLIRNHLVAKGLHDTANTLT
KEADLPMTCLSHSSHCSHSASSFPAVAPPPAASPVTTLPRTPRLANGVGSRHGNHISHSS
TTPSNHPQARPSTSQSAGPPSSAIPSTSAPHCSNGSPLIGRIVFSRERQTPCGAINCKKN
RVLRQKSDHGAFSQSPAMKKQFDRHLPSPPALDSIITEYLREQHARCKNPVATCPPFSLF
TPHQCPEPKQRRQAPVNFTSRHSRRVIYPKYGGVDGGCFDRHLIFSRFRPISVFREADED
ESGFTCCAFSARERFLMLGTCTGQLKLYNVFTGQEEASYSCHSSAITHLEPSRDGSLLLT
SASWSYPLSALWGMKSVFIMKHSFLGDHYVEFSKLSQDRVIGTKEHVARIYDVQTGQVTL
TLNNPDLANNYKRNCATFNPTDDLVLNDGVLWDIRMAQAIHKFDKFNMNISGVFHPNGQE
VIINTEIWDLRTFHLLHTVPALDQCRIVFNNSGTVIYGAMLQADDEDDMMEMQMKSPFGS
SFRTFNATDYKPIATIDVKKNIFDLCTDTKDCYLAVIENQDSVNTDTVCRLYEVGRQRLA
EEEEEDEEDQEDDDQEEDDDDDDDSDDDVDTDPLIAELENDNGGEDEDDDDGNDEFSPSD
EEVARLLEDDGDGGDDDDEDGDDDDDDDDNDDDDDSDNDVDLDGDNDSSDNSDLEDDIIL
SLNE
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagcatctgcctccgtggactcaaaggcagagctgactgctctgctggaacag
tgggagagggagcagcaaggcaacacacaggagctggtcaacatcctcacaaaaatctct
gagcttgttgaaaaggagacagaagagtaccacaaagcggaccctgacccttttgatgat
cggcatcctgggagagctgatccagaaggcatgttggggcatcttctgaagatcttgttc
aaaaatgatgaattcatgaatacattggtgaacagctatgtgatgaccagcagagaattc
tctctaaatgcagcagcttgtcgcctgctgcagaacatcatgcctgggctggagacagct
gtggtctttcaagaaaaagagggcatcgttgaaagactttttaagtgggctcaggaggct
gaacagcctctacgaatctatgccacaggcctgttggcgggcgccatggagaatcaggac
attgctgccaactacagagaggagaactctgttttggtgcctttgatgctgcacaggttg
cgtgagcttcaggataaggatgctgagaacaaacgggaaatcaaacgacctagccccagg
aagattctcagtgagcctctgctgcctttagatgaggaggctgttgatggaggctttgaa
gacaagcccttctctccatgtaaaaatgcagacgaaaaggaagcagtggggccgcaagga
gacgccgaagttcccttctcaagcgccgagcctgaaaacgaattgtcgttccgtttcagc
tcgcctcacaggacgagcagccgtgccagctcagctgttaaaaccatgatgaagcccatg
tctgccccgggttcactgacacacccaggcatgtctgatggcagcggctacctgcggagg
aggatggagagagacaatgccagaacctcaaaacagaagctgaatttctctctgccggaa
ccagaaaggaacttaagcgagctttccaacagcagctggtcagagatgagtccctgggtt
attggcaacaactaccatctggaccctttgaccccagagattgagcagaggctcatcctg
cagtatctcacacctctgggagagtatcaggagcttctggcagtgtttatgcagatggga
gcccgtgagctcctcatgcactatatggatctaaagcagaccaatgatgtccagctgacc
tttgaggctctgaagtatttggcttctctgctattgcacaagaagttcgctgcagagttt
gttgctcatggaggcgttcagaaattgctggaaatcccaagaccttcgatggctgctaca
ggagtgtcactgtgcctctattacctcgcctataaccaggatgcaatggaaagggtgtgc
atgttgccccactccgtcttgtcagatgtggttggttacacgctgtggttgttggagtgc
tcgcatgcatcaggctgctgccacgcaaccatgttcttctccatctccttttcgttccgg
gccgtcctcgagcttttcgacaagcaggatggacttagacggctcgtcaatctgatcagc
acactggagatcctgaatccagaggaccagggagcgctgctgagcgatgatgagattttc
tccagcaggcagagagccaagcacacctgcatggctctgcgcaggtacttcgaggcccat
ctggcaatcaaggtggagcaggtgaagcagtctctgcagcgcacagagggaggtgccctc
attcactcacaaccatattacaaggcggtcagctacagccgtgaacaggtggtggaaatg
atggagtttctgatcgaatacggtccactcagactatactgggaaccagcagaggtcttt
cacaagctgtcttgtgtccagcttctcctgcagctcatttctattgcttgtgactggagg
acctactacggcaggagtgatacagtacgatacgccctcgacatcctgagtatcctcaca
gtggttccaaagacacagctgctgttgtctgaacctgttgcagtgctggatgagggagga
tccactgtttctactgttggtatgagtatagtcctggctgtggcggagggagaggtcttt
gtgaacgatgcagagatccagaagtcggctctccaggttgtcatcaactgtgtgtgtgcg
ccagacaaacgcatgtccagcattggcaaatttattgcggggactccccgtcgccgtctg
ccgcagcagacgaaggccaacgagagcgtgctcaccaagatgtggaatgttgtacagtcc
aacaacgggatcaaggtgctcctgtcccttctgactgtcaagatgcccattacagatgcc
gatcagatccgagctctttcctgcaaggctctggtgggtttgtctcgctccagctctgtc
agacaaatcatcagcaagttgcctttgttcagcagcggacacatccagcagctcatgaaa
gagcctgttctccaggacaaacgcagcgaacacgtcaagttctgtaagtttgcagcagag
ctgatggaaaggatctctgggaagccgttgttgatcggtacggatgtgtctctggcgtgg
ctgcagagggccaacgtggttgctcagtccaagatcaccttccccgagaaggagctgctg
cttctcatacgaaaccaccttgtggccaaaggtctacacgacacagcaaacacactcacc
aaagaggcagatctgcccatgacatgcctttcacattcatctcactgttcacattcagcc
tcctctttccccgctgttgctcctcctcctgctgcctcccccgttactacgctcccccgc
accccacggttggccaacggtgtgggctcacgacacggaaaccatatctcacactcatcc
accacgccatccaaccatccacaagcacgcccctccacatcacagtcggctggaccgcct
tctagcgccataccgtcgacgtctgccccacactgtagcaacggctcgccgttgatcggc
cgcatcgttttctctcgtgaacgacagacgccgtgcggagccataaactgcaaaaagaac
cgagtccttcgacagaagtctgatcatggggccttcagccagagtccagccatgaagaag
cagtttgacagacacttaccttctcctcctgccttggacagtattatcacagagtatctg
agggaacagcacgcccgctgtaaaaaccctgtcgcaacctgcccacctttctctcttttc
accccccaccaatgccctgaacccaaacagagacggcaggcgcccgtcaatttcacatcg
cggcattctcgtagagttatatatccaaaatatggaggcgtggatggaggatgctttgac
agacatcttatattcagcaggttccgtcccatctccgtgttcagggaggcggatgaggat
gagagcggattcacgtgttgtgccttctcagctcgtgagcggttcctgatgctcggaacc
tgtacaggccagctcaagctctacaacgtgtttacaggccaggaggaagctagctacagc
tgtcacagctccgcaatcactcacctggagccgtcacgggatggttctctgctcttaaca
tcagcctcgtggagttaccctctttctgcactgtggggcatgaaatctgtgttcatcatg
aagcattccttcctgggtgaccattatgtggagttcagcaagctttcacaagaccgtgtc
atagggacaaaagaacatgtagcacgcatttatgacgtacaaacaggtcaggttactctg
actctgaacaacccagacctggccaacaattacaagaggaactgcgccaccttcaaccca
acagatgacctggtcttgaacgatggcgtgctgtgggacatacgcatggctcaggccatc
cacaagtttgacaagttcaacatgaacatcagtggggtgtttcatcccaatggccaggag
gtcatcatcaacacagaaatttgggacctgcggaccttccacctcctccacacggttcct
gctctggaccagtgcaggatagtcttcaacaatagcggcaccgtcatttatggagcaatg
ttgcaagcagatgatgaagatgatatgatggaaatgcaaatgaaaagtccatttggttca
tcgtttaggaccttcaacgccacagattacaaaccaatcgccacaattgatgtcaagaag
aatatatttgacctttgcacagatacaaaagactgctacctcgctgtgattgagaatcaa
gactctgtgaacaccgacactgtgtgccgactttacgaagtcgggcggcagcgacttgca
gaggaagaggaggaggatgaggaagatcaggaggatgatgatcaggaggaagacgacgac
gatgacgacgactctgacgacgacgtcgacacggatcctctcatcgccgagctggagaac
gataacggaggtgaggacgaagatgatgacgatgggaacgatgagttttctccttcggat
gaagaggttgcgcgtcttctcgaagatgacggcgatggcggagatgacgacgatgaagat
ggtgatgacgacgacgatgatgacgacaatgatgatgatgatgactctgataatgatgtc
gatctagacggtgacaacgacagctcggacaactctgaccttgaagatgacatcatctta
tccctgaacgagtga
DBGET
integrated database retrieval system
