Xiphophorus maculatus (southern platyfish): 102236006
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Entry
102236006 CDS
T02923
Symbol
frem2
Name
(RefSeq) FRAS1-related extracellular matrix protein 2
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102236006 (frem2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
xma04091
]
102236006 (frem2)
Lectins [BR:
xma04091
]
C-Type lectins
Lecticans
102236006 (frem2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Big_9
Cadherin_4
DUF3377
Motif
Other DBs
NCBI-GeneID:
102236006
NCBI-ProteinID:
XP_023198561
UniProt:
M4A2L7
LinkDB
All DBs
Position
11:complement(29538329..29606854)
Genome browser
AA seq
3120 aa
AA seq
DB search
MLLRGLLLCFSVTGFVLAQPNSSGLFYALRSELSEDAILVANNGIRVPFGRSVFIDPIND
LVVQTQPGDRCSITVLDNDPLTQRPGHLSPKKFPCDFGPSDVIYSHYGSRSPARDRVRLQ
LRYDAQTETVIIPFMMEVEVVFTQMELLTKNVPLTVDRLKGISNPIDMKILEFTYDKVNY
KCEVASLSGASTLPRYGKLIEGSKLSTVMDCDEFIQAEIRYEHMFNRKTPNRDYVPMVVE
LHDKEGNLVKQEYFHLMVRIRDGEENTPPKPSFVTMMMMEVSQFVMTALTPDMLAAEDTE
SDPEELIFNISSPLSYEEGYIVSTDDRNLPITSFYQKDLQDLKIAYVPPSLDSDTERIFQ
LEFEVIDTEGALSDTFAFMIVVKPMNTLAPVVTRNTGQLLYEGQSRPLISTHNLEISDED
NLDSVIVTVVDGLRHGGLMVLGSQRKFFSPADLTTGAVVYQHDGSDTYSDNIVFKMTDGK
NEVEFLFPITIVPTDDESPIINANMGIVLFKHQTIPISPLMLSAADIDSEDSTITFTIIP
PFSTIGTVLLRQSDAPEDPSSWKFNAEDEMYEKEVTEWLQKDITDGKLFYRHTGPHSIET
IMDQFMFTVQDDNDPPNLSGDSIFVIRVLPIDDVSPELYPGTTLQMTVEEYELTQFTKEV
LRYTDIDSEDRDLKYILIQAPTDTDENNPIVFGSLVLTDRPDSEVTEFTQAQINHHKISY
APPNVELGITAHVVQFRYTVEDTAGNSVEGVFTVFLQPVNNNPPQITNTGFTVFEGGMHI
ITTAELDAQDLDTEREKITFALSRPPKHGQIKAVFTDLEKNRIFKLDDISEGKISYIHSG
EETVSDDFQLDISDGVHVVTVTVKVIVKPIDDETPSIRLPSGTIGSHMDVLENGVAEITA
NVIQGHDDDTDDFQLTFIMEDPPVFGEILVKGVPAARFTQAEIINGEVVYAHTGGEIGLF
SQQDRFNLTLTDMSDDWTVGGNIVSGVHIQVTVLPVDNQAPEIGVGLQFSVIEGEKYGIS
SQHLNADDNDTPTDDILCTVIVQPIAGYVENISPAPGSEKSRSGTAISAFTLRDIREGNI
FYVQSIHKGVEPVEDRFTFRCSDGINFSENHFFPIIIIPTNDEKPEIYLREIVVMEGMNI
IIDPPILNGADADFPPEELMFIISKPPKHGAIVNQLSTGSVLVSNFTLEEIREASSIIYK
HDDSETTEDSFDIIVTDGKYSVQKTAVIMIIPVDDETPRMAINDGLEVEVGETKEINNKI
LKATDLDSEDSTLTYIIRFGPGQGLLQRKTPFGFLENITLGMNFTQSELDVGLILYTHNG
QDGFRDLIKFDVTDGINSLIDRYFYITVGSIDVVFPDVISKGVSLREGGRVTLSTDLLST
SDLNSPDEKLVFTVTRAPVRGHLECTDTPGIPIGSFTQLQLAGSKIFYIHTSDDEVKMDS
FEFEVTDGFNPIFRTFRISIVDVDNKKPVVTINSLIVTEGQLKLITPFELTAEDQDTSEK
LIKFTITQLPVHGKVLYNQSTPVASFTKQDLNENLISYKHDGTETLEDSFSFTVTDGTHT
DFYVFPNTIFETRRPQTMKITIVAIDNGVPQIVVNKGAATLKILATGHLGFPISPKVLKV
EDRDSIPALVVFHITTQPKHGYIVNLGHGNNSIDAFSQADIDNLNICYVLRGEENATLDL
FHFSVEDNGGNKLKGQQFHLDWAWISMEKEYYVVDEEDKFLEVVLQRRGYLGETSFIGIG
TQDGSARKNEDFKGKSQRQVQFNPGQTRATWRVQILTDDKYEQAETFQILLSEPVMGVME
FPISATVEILDPDDESTVFFPEPIHSVEEDVGALFIPVHRSGDISEVLMVVCSTQQGSAT
GTIPTTVLSYSDYISRPEEHSSILRFDKGEREKMCRVVIIDDSLYEEVESFNVILTLPVG
GRLGMHYSTTKVSILKDIDDAPVFYFGEVQYHVDESDGYVEVNVWRTGTDLSKTGTVTVR
SRKVERASAEAGIDYVGISHNLDFAPGVSMQTFKVTILDDMGQPELEGAESFELVLQMPV
NGILGEPGKATVFINDSQSDMPKVHFREPVYSGEESDGQITATVYRSGDIWHKSSVRCYS
RQGTAQVASDFEERPNTDASIITFSPGEVEKPCILSLVDDALYEEVEELRLVLGTPKSSS
QFGASVGSLNEALLQIKDTADKPIIRFAETKFNINEPKETGTVATVKIPVVRVGDTSKVS
VVRVHTKDGSAVSGMDYYPVSQDIKFKQGEKQHVIEVEVLADGVREMREAFTVHLKPDEN
MVAETQVTKAIVYIEESNSMADVTFPSSPLVMSLLHYDDVARTADNFHPPAGYPVICVTA
CNTKYPDYDKTGPICVSEHINNTLTRYRWLISAPAGPDGVTSPMREVDFDTFFTSSKMIS
LDSIYFQAGSRVRCAARAVNSNGEEGLELNSPIVTISQEEGVCQPRKMGTVGAEPFSAKL
RYTGADDQKHPNLIKVTITMPHIDGMLPVISTRPLMNFDLTLSPDGTRVGNHRCSNLLDF
NEVTTGHSFITASTRSPESMGESAPYQFSVSLRGNSTLRFYRNLNLEACLWEFSSYYHMS
ELLTDCGGTIGTDGQVLNLVQSYVTLRVPLYVSYVFHSPLGTGGWQHFDLQSELRLTFVY
DTAILWQEGIGSPPQAELQGSLYPTSMRINEQGRLVVNFRTKAHFRGLFVESHSSGRIKT
TATSMSSMVMSVDHPGLTFNLTLVRTEPTYNQPVQQWTLLSDFAIRDYSGTYTVHLIPCT
TSQNMEYTVPPVCNPREYLTFDLDIRFQQVSDPVAVEFSLNTQMFLLSQKSLWLSDGSVG
FEQESDVTFSEGDTIYGRVMVDPVQNLGDSFFCSIEKVFLCTGADGYVPKYNPTKFEFGC
LADSPSLLYRFKILDKAQPETQARVFGDVSFNAVLAVDDPSAVSLVRKSGSDGFSLDSTA
MFQVAAGREWYIHTIYTVRSKENTNRGIGKRSLEYHSFVSTLTSFGTKSHRRKRSAHDKI
PAIAEDIGIDNGRGTNIMHIALDRTKRRSRGSDELFPGGRELGELNADNQEESLVSIVGV
LVGLLLTVLIIVTIALVLKSRQKDGKEVWSEGVQEVVKGSVSTEPMLVVRMQDCHNSSEV
NT seq
9363 nt
NT seq
+upstream
nt +downstream
nt
atgctgctccgcggacttctcctgtgcttttcagtaacaggttttgttttagcgcagccc
aacagctccgggttattttacgcgctccggtccgagctgtcggaggacgcaatcctggtg
gccaacaacggaatacgcgtgcctttcggaaggtcggtcttcatcgaccccatcaacgac
ctggtggttcagacgcagccgggagaccggtgcagcatcaccgtgctggacaacgacccg
ctcacacagagaccggggcacctctctcccaaaaagtttccatgtgattttggtccgagc
gacgtgatatattctcactacggctccaggagtccggccagggatagagttcggctgcag
ctcaggtatgatgctcaaaccgaaactgttattatcccgttcatgatggaggtggaagta
gtttttacgcagatggagttactcaccaaaaacgtgccactcactgttgatcgtcttaaa
gggattagtaatcctatcgatatgaagatattagagtttacttatgataaagtgaattac
aaatgcgaagtggcatccttatccggcgccagcacactgcccagatatggaaaactcatt
gagggaagtaaactttccacagtgatggactgtgatgaattcatacaagcggaaatacgc
tacgagcacatgtttaatcgtaaaactccaaatagggattatgttcctatggttgtagag
ctccacgataaagaagggaacctggtgaagcaggagtatttccatctcatggttcgcatc
agagatggagaggagaacactccccccaaacccagctttgtaaccatgatgatgatggag
gtgagccagtttgtgatgacagccctcacccctgacatgctggctgctgaggatacagag
tcagacccagaagagcttatttttaacatcagttctcccttatcttatgaagagggttac
atagtcagcacagatgacagaaaccttccaatcacctccttctaccagaaagacctgcag
gatttgaaaatagcttatgttccaccttctctggactcggacacagaaaggatttttcag
ctggaatttgaggtgatagacacggagggggctctctctgacacatttgcttttatgatt
gttgtgaagccgatgaacactttggcccctgttgtgacgcgtaacacgggtcagctgctg
tatgagggccaatcacggcctctcatcagcacacacaacttggagatcagcgacgaggac
aacctggactctgtcatagttacagtggtggacggcctacgacatggggggctcatggtg
ctgggctctcagagaaaatttttctcacctgctgacctcacaacaggggctgttgtctat
cagcatgatggcagcgacacatacagtgacaatattgtgttcaagatgacagatgggaaa
aatgaagttgaatttctctttcccatcactattgtccccaccgatgatgagtcaccaatc
atcaatgcaaacatgggtatagtgcttttcaaacaccaaacgattcccatatcgcctctc
atgctcagtgctgctgatattgactctgaagactcaacaattacatttaccattattccc
cctttttccacaatcggaactgtgctccttcgacagtcagatgccccggaggacccctcc
tcttggaaatttaatgctgaggatgaaatgtatgagaaggaggtgacagaatggcttcag
aaagacatcacagatggaaagttgttttacaggcacacaggtccccacagcatagaaaca
atcatggatcagtttatgttcactgttcaggatgacaatgacccacctaatttatctgga
gatagtatatttgtaattcgtgttttaccgattgacgacgtgtcccctgagctgtacccc
ggcactaccctgcagatgactgttgaggagtatgaactcactcaattcactaaagaggtc
ctccgttacactgacatagactcagaggatcgtgacctcaaatatatactcatccaggct
ccaactgatacagatgaaaataaccccattgtatttggatcattagtgttgacagatcgt
cctgactctgaagtgacagagtttacacaagctcaaataaaccatcacaagatatcctat
gcgcccccaaacgtggaactgggaatcacagcccacgtagtacagttccgttacaccgtc
gaagacacggcagggaacagtgtagagggggtgttcacagtctttctgcagccagtcaat
aacaacccaccacaaatcacaaacaccggtttcaccgtgtttgaaggcggaatgcacatt
ataaccactgcagagctggatgcccaagaccttgatacagaaagggaaaagataactttt
gctctgagtcgaccacctaaacatggccagattaaggctgtattcactgacctggagaaa
aacaggattttcaaacttgatgacatctcagaggggaaaatatcatatattcacagtggg
gaggagacagtgagcgatgattttcagcttgatatcagtgatggggtacatgttgtgact
gtgacagttaaagttattgtaaagcccattgatgatgaaactccctccatcagactcccc
tcaggaacaattgggtctcacatggacgtgctggaaaatggtgtggcagaaatcacagca
aatgtgattcaaggccatgatgatgatactgatgatttccagctgacatttattatggaa
gatcccccagtctttggggaaatattagttaaaggagtgcctgctgcaaggtttacacaa
gctgagataattaatggggaagttgtgtatgcacacactggtggtgagataggtctcttc
tcacagcaagacagatttaatttgaccctcacagacatgtctgatgattggacagtaggg
ggcaatatagtcagtggagtccatatacaagttactgtcctgcctgttgacaatcaggcc
cctgagattggagttgggctccagttcagcgttattgaaggagagaaatatggtattagc
tctcagcacttgaacgctgatgataatgacactccaacagatgacatcctttgcactgtc
attgtgcagcccattgcaggctatgtagaaaatatatcccctgctccaggctcagagaag
tcaaggtcaggaacagctatcagtgcatttactctaagagacataagggagggaaatatc
ttctatgtgcagagcattcacaagggggtagagccagtggaggatcggttcacatttagg
tgctctgatggcatcaatttctcagagaaccatttctttccaatcataatcatcccaaca
aatgatgaaaagccagagatttatttaagggagatagttgtgatggaggggatgaacatt
atcatcgaccctccgattctgaatggagcagatgctgattttccacctgaggagctgatg
ttcatcatctccaaacctcccaaacatggtgccattgtaaatcagctatccacgggctct
gttttggtgtctaacttcaccttagaagagattagagaggcgtcgagtattatttataag
cacgatgactcagagacaacggaggacagctttgatatcattgtgacagatggaaagtat
tctgtgcagaaaacagccgttattatgatcatccctgttgatgatgagacccccaggatg
gctatcaatgatggcctggaggtggaagttggagagacgaaggagattaataataaaatc
ctcaaagcaacagatttagattctgaagacagcacgctaacatatataatccgatttggg
cctggccagggtctcctgcagagaaaaacaccatttgggtttcttgagaacatcacactt
ggcatgaatttcacacaatctgaacttgatgtaggactcatattgtacacacacaatgga
caagatggcttcagagacttaatcaaatttgatgtgactgatggaataaattcactcata
gatcgttacttctatatcactgtgggcagcattgacgtcgtattcccagatgtgatcagt
aaaggtgtgtctctaagagaaggtggcagggtgaccttatccacagatcttctaagcacc
tcagatctcaacagtcctgacgagaaattagtttttactgtcacgcgggccccagtcagg
gggcacctggagtgcacagacactcctgggatacctattggatcttttactcaacttcag
ttagcaggcagcaagattttttacattcacacctctgatgatgaggtaaaaatggacagt
tttgagtttgaagtcacagatgggttcaatcccattttcagaacatttagaatatctatt
gtggatgtagataacaagaaaccagttgtgactataaatagtctaattgtcactgaaggt
caactgaaattaatcacacccttcgagctaaccgctgaagatcaggacacttctgagaaa
ttgattaaatttacaataacccagttgcctgttcatggcaaggtgctgtacaatcagtct
acacctgttgccagctttacaaaacaagacctcaacgaaaacctcatcagctacaaacac
gatggaactgaaacactagaagactcattctccttcactgtcactgatggcacacacaca
gacttctatgttttccccaacacaatttttgagacaagacgtcctcagactatgaagatt
acaattgtggcaatagacaatggagtccctcagattgtggtaaataaaggtgcagccact
ttgaagattttggccacaggtcatttggggttccccatcagccctaaagtgttaaaagtg
gaggacagggacagcatcccggccttggtggtgttccacatcactacccagcccaaacac
ggctacatcgtcaacctgggacacggaaacaactccattgatgcctttagtcaagctgat
atcgacaatctgaacatctgctatgtactgaggggcgaagaaaatgctactttggacctc
tttcacttctctgttgaggataacggtggaaacaaacttaaaggacagcaattccacttg
gactgggcctggatttccatggagaaagagtattatgtggtggatgaggaagacaaattc
ttggaggtggtgctccaacgaagaggatatctgggagagacgtcattcattggcattggt
acacaagatggtagtgcaagaaaaaacgaggacttcaaggggaagtctcaaaggcaggtc
cagttcaatccaggacagacgagagcgacgtggcgtgttcagattctgactgacgataag
tacgagcaagcggagaccttccagattctgctgtcagaaccagtgatgggagtgatggag
tttcccatctcagcaacagtggagatcctagacccggatgatgagtcgaccgtgttcttt
cctgaaccaattcattcagtagaggaagatgtcggggcgcttttcatccccgtacaccgc
agtggagacataagtgaggttctcatggtggtctgttccacacagcagggttctgccaca
ggaacaatccccaccaccgttctgtcctactcagactacatttcacgtccggaggaacac
agcagcatccttcgattcgacaaaggagagcgggagaagatgtgccgcgtggtgatcatt
gatgactctctgtacgaggaagtggagagcttcaatgtgattctgaccctgcctgttgga
ggtcggctcggaatgcactattctaccactaaagtcagcatcctcaaagacatagatgat
gctcccgtgttttactttggagaggtccagtatcatgtggatgaaagtgatggctatgtg
gaggtcaatgtgtggaggacaggaaccgatttgtccaaaacggggactgtgacagtccgt
tctcggaaggtggagcgtgcttctgctgaagctggtattgactatgtgggcataagtcat
aatttggactttgccccaggtgtcagcatgcagacatttaaggtcacaattttggacgat
atgggacagccagagctggagggggccgagagctttgagttagttctgcaaatgcctgtg
aatggtattctaggagaacctggaaaagctacagtcttcatcaatgactcacagtctgac
atgccgaaggtccattttcgtgaaccggtttacagtggagaggagagtgatggtcagata
acagcaacagtgtaccgcagtggcgacatctggcacaaatcctctgttcgctgttactcc
cgtcagggcaccgcacaagttgcctctgacttcgaggagcgtcccaacacagatgcttct
atcatcactttttcacctggggaggtggagaagccgtgcatcctgtcactggttgatgat
gcattgtacgaggaggttgaagagctaaggctggtcttagggacaccaaagagcagctca
cagtttggcgcatcagttggatctcttaatgaggctctgcttcaaataaaggacacagct
gacaaaccaatcattcggtttgcagaaaccaagttcaacattaatgaaccgaaggaaact
gggactgtggcaactgtgaagatccctgtggtacgagttggcgacacatcaaaagtgtca
gtggttcgggttcataccaaagatgggtcagccgtctcaggaatggattattacccagtg
tctcaagacatcaagtttaaacagggggagaaacaacatgtcatagaggtggaggtattg
gctgatggagtcagagaaatgagggaggcttttacagtccatctaaagcctgatgaaaac
atggtggctgaaactcaggtgacgaaagctatagtttacattgaggagtccaacagcatg
gctgatgtcaccttcccctcctcaccccttgtcatgtcactgcttcattacgatgatgtc
gccaggacagcggacaacttccacccaccagctggctacccagtcatctgtgtcacagct
tgcaacacgaaatacccagactatgacaagacgggtcctatctgtgtcagcgagcacatc
aacaacaccttgacccgctaccgctggcttatcagtgccccagcaggtcccgatggcgtc
accagccccatgagggaggtggactttgacacgttctttacctcctctaagatgatctcg
ctggactcgatctacttccaggcaggttcgagggtgcggtgcgctgctcgagctgttaat
tctaatggggaggaaggtttggagctcaacagccccattgtcaccatcagccaggaggaa
ggtgtgtgtcagcctcgtaaaatgggaactgtgggcgctgaaccgttctctgcaaagctg
cgctacaccggagcagatgaccagaaacaccctaacctcatcaaagtgaccatcaccatg
cctcacatagatggtatgcttccagtaatctccactcggcccctcatgaactttgacctg
actttgagtccagatggaacccgagtcggaaaccaccgctgttcaaatttgcttgacttc
aatgaggtcacaacaggtcacagcttcatcactgcttcgacacgcagcccagagagcatg
ggggagtctgcgccctaccagttcagcgtctctttgcgggggaacagcacgctgcgcttc
tacaggaacctgaacctggaagcatgtctgtgggagttcagcagctactaccacatgtct
gaactgcttacggactgtggaggtacaataggcacagatggacaggtgctgaacttggtc
caatcttacgtaaccctgcgtgtgcctctctacgtgtcttatgtgttccactcacccctg
ggcaccggtggctggcagcactttgacctccagtcagagctgcgcctcacttttgtgtat
gacacagcaattctgtggcaggagggcatcggcagccccccacaggcagagctccaggga
tcgttgtatcctaccagcatgcgcatcaatgagcagggacgtttggtggtgaatttccgc
acgaaagctcatttcaggggtctgtttgttgagtctcattcttcaggcagaatcaaaaca
accgcaacatccatgtcatccatggtgatgagtgtggaccacccaggcctgacctttaac
ctcaccttagtgaggactgagcccacctacaaccagccagtccagcaatggaccttgctc
tctgattttgctatcagagattattctggaacatacacagtgcatttgatcccatgtaca
acatctcagaacatggaatacactgttccacctgtttgcaatcccagagaatatctcact
tttgatctcgacattagatttcagcaagtgagcgacccagttgcagtggaatttagtctg
aatactcagatgttcttgctgtcccagaagagcctctggctttctgatggctctgtgggt
tttgaacaggagagtgacgtcactttttctgaaggtgacacaatatatggtcgtgtcatg
gtggatccagtgcagaatttgggagattctttcttctgcagcatagagaaggtgtttctc
tgcactggtgctgatggctatgtgcccaaatataatccaaccaagtttgaatttggctgt
ctcgctgactctccatccttgctatacagattcaagattcttgacaaggcccagccagag
actcaggcacgtgtgtttggagatgtcagttttaatgcggtgctggcagtagacgatcca
tcagctgtatctcttgtcagaaagtcaggatctgatgggtttagcctggactcaacagcc
atgttccaggtcgctgcagggcgcgaatggtatatacacaccatttacaccgttcgctcc
aaagagaacaccaacaggggcattgggaaacgcagcctagagtaccactcttttgtttcc
actctgacatcatttggcacaaaaagccatcgcagaaaaagatctgctcacgacaaaatc
ccagcaattgcagaagatattggaatagataacggccgagggaccaacattatgcatatt
gctttagaccgcaccaagagaaggtcgaggggatcagatgagttgttccctggtggccga
gaacttggtgagctgaacgctgacaatcaagaggaaagtctagtgagcattgtgggggta
ctggtggggctgctgctgacagtcctcattattgttaccattgcactggtactgaaatcc
agacaaaaggatgggaaggaggtatggagcgagggagtgcaggaggtggtgaaaggttct
gtcagcaccgaacccatgctggtggtgaggatgcaagactgccacaacagctctgaggtc
tga
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integrated database retrieval system
