Xiphophorus maculatus (southern platyfish): 102236010
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Entry
102236010 CDS
T02923
Name
(RefSeq) cyclic nucleotide-gated channel cone photoreceptor subunit alpha-like
KO
K04950
cyclic nucleotide gated channel alpha 3
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xma04040
]
102236010
Ion channels [BR:
xma04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
102236010
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GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
CDC45
TPR_TTI1_C
RR_TM4-6
Tim54
NPR3
Ctr
Presenilin
DUF3464
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
102236010
NCBI-ProteinID:
XP_023185372
LinkDB
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Position
24:5172495..5178156
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AA seq
621 aa
AA seq
DB search
MEPQQQAVGTGLLSRLSNMTRFGRSSVGPGESGLSNQRTDREKRWSLAAQNTNNSNNNDG
KKDEKKEEKKDEKKDEKKDDKKDAKKDEKKDDKKDDKKEPPKEVWIMDPATDTYYNWLCT
VSVPVFYNLMFLVARACFNELQNANSTLWMALDYISDAIYYVDTFVRARTGFLEQGLLVK
DEKVLKEKYTKTLQFKLDMMSIVPTDFVFLYIGINNPEWRFNRLFRSARLFEFFDRTETR
TNFPNIFRIANLVLYIIIIIHWNACLYFAVSKTLGFGTDTWVYPNISNPDYARLTRQYIY
CFYWSTLTLTTIGETPPPVRDIEYFFVVADFLTGVLIFATIVGNVGAMISNMNAARVEFQ
AKIDSIKQYMQFRKVTKDLEARVVKWFDYLWTEGKSCDEKLVLKNLPDKLKAEIAINVHL
ETLRKVRIFQDCEAGLLVELVLKLQPQVFSPGDYICKKGDIGREMYIIKEGKLAVVADDG
VTQFVVLSDGAYFGEISILGIKGSKAGNRRTANIRSVGYSDLFALSKDDLMEALIEYPDA
KYALEDKGRAILMKDNLIDESLVAAVDAKDLEDKVNRIEGSVDVMTIKLRKLTNQYESSQ
RKLNQRLANLSNEVKSLRDDE
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggagccccagcagcaggcagtaggaacaggacttctgtccaggctttcaaacatgacg
cgctttggaaggagcagcgttggtcctggagagtccggcctcagcaaccagaggacagat
cgggagaaacggtggtccctagctgcgcaaaatacaaacaactccaacaacaacgatggg
aaaaaggatgaaaagaaggaggaaaagaaggatgagaaaaaggatgagaagaaagatgat
aagaaggacgcaaagaaggatgaaaagaaagatgacaaaaaggatgataaaaaagagcca
ccgaaggaggtgtggatcatggaccctgctaccgatacgtactacaactggctgtgcaca
gtctcggtgccggtcttctacaacctgatgtttcttgtggcaagggcatgttttaacgaa
ctccaaaatgctaactcaacactgtggatggctttggactacatatcagatgctatctac
tatgtagacacctttgtgagagccaggactggtttcttggagcaaggactgcttgtgaag
gatgaaaaggtgctaaaagaaaagtacacaaagaccctgcagtttaagttagatatgatg
tccatcgttcctactgactttgtgtttctttatattggaatcaacaacccagagtggagg
ttcaaccgtctctttaggtcagctcgactctttgagttctttgaccggacggaaactcga
actaactttccaaacatctttcgaattgcaaatctggtactttacattatcatcatcatt
cactggaacgcttgtctctactttgctgtctccaagactcttggttttggtacagacaca
tgggtatatcctaacataagcaatcctgactatgctcgtctgaccagacagtacatctac
tgtttttactggtccacccttaccttgacaaccattggagagaccccacctccagtcagg
gacatagagtacttttttgttgtagccgactttctcactggggttttgatctttgcaaca
attgtaggcaatgttggtgccatgatttccaacatgaatgctgcgcgcgtggagtttcag
gccaagattgactcaatcaagcagtacatgcaatttcggaaggtcacgaaagatctggag
gcaagggtggtgaagtggtttgactacttgtggacagaggggaagtcctgtgacgagaaa
ctggtactaaagaatctgcctgacaagcttaaggctgagatagccatcaacgtccacctg
gagactctgagaaaagtgcgtatctttcaagactgtgaagcaggtttacttgtggagttg
gttctgaagcttcaacctcaggtcttcagccctggtgactacatctgtaaaaaaggggac
attggcagggaaatgtacataatcaaagaaggaaagctagccgttgtggcagatgatggg
gtgacgcaatttgttgtcctcagtgatggggcatattttggagaaatcagcatccttgga
ataaagggcagcaaagcaggaaaccggagaaccgccaacatccgaagtgttggctactca
gatttgtttgcactatccaaagatgatctaatggaggctctcattgaatatcctgatgct
aaatatgctctggaggacaagggaagggccattttgatgaaggataatctcatagatgag
tcgctggtagctgctgttgatgccaaggatttggaggataaagtcaaccggattgaaggc
agtgtggacgtcatgacgatcaaacttcgaaagctcacaaatcaatatgaatcctctcag
cgtaaactcaatcagcggctcgctaacttgtcaaatgaggtcaaaagcctcagagatgat
gagtga
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