Xiphophorus maculatus (southern platyfish): 102236057
Help
Entry
102236057 CDS
T02923
Symbol
nphp3
Name
(RefSeq) nephrocystin-3 isoform X1
KO
K19360
nephrocystin-3
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xma03037
]
102236057 (nphp3)
Cilium and associated proteins [BR:
xma03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
102236057 (nphp3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
NPHP3_hel
NPHP3
TPR_10
TPR_1
TPR_7
TPR_8
TPR_2
TPR_MalT
TPR_16
TPR_19
TPR_14
NPHP3_N
TPR_11
NACHT
AAA_16
KAP_NTPase
ATPase_2
TPR_6
DUF2225
AAA_22
AAA_19
ARM_TT21_4th
DUF4635
Macoilin
ANAPC3
Motif
Other DBs
NCBI-GeneID:
102236057
NCBI-ProteinID:
XP_005798645
Ensembl:
ENSXMAG00000002552
UniProt:
M3ZK28
LinkDB
All DBs
Position
21:9099429..9113536
Genome browser
AA seq
1302 aa
AA seq
DB search
MGTASSLVSPGEVIEDGYGGEGGEACEIPVEVKPKARLLRSSFRRGPRVIGASFKSTGSV
DLEYAAEYERLRKEYEIFRVSKNNEVTSMQKKEAKLDVENKRLRAELQALQKTYQKILRE
KEAALETKYQAMERAATFEHDRDKVKRQFKIFRETKEKEIQDLLRAKRDLEAKLQQLQTQ
GIHMFSPNDSDSDDNQTTVTAVGTQCEYWSGGVLGSEPSMGSMMQLQQTFRGPEFAHSLI
DVEGPFANVSRDDWDAAVASLLQVSPHVPQALWSNTVRCYLISTQDTKAEMEIFVKKHSV
VLRRMCEGLGHFYLNVYFPEENAASYAMVRRQEIERSSICVLLLKSTVTSPVVEDCEEAF
VKNPDGHPLVLYLRTEEDRGLTGPIRQLLERINAADKAAKVKVVDHSSSAEEGASLIYAQ
LEKVIKQELLGFEGGDDDSKDAAIDEGREEDLGDVLWDLHDEQEQIESYQQACSSTTSQL
GFQKYIDRLNDMIAAPPPTPPLLVSGGPGSGKSLLLSKWIELQQKQSPNTLFLYHFVGRP
LSISSEPVLIIKRLTVKLLQHFWSISGLSMDPSKILEEFPRWLERLSARHQGNIIIIIDS
VDQIKQAERHMKWLIDPLPVKVRVVVSVNVETCPQAWRLWPTLHLDPLSAREVKSVVSAE
CQTMDFRLTKDQEKKLERHCRSASTCNALYVTLLARMITSFQSGWSLEKSLEQCLQCQDT
LSLFRLALKMMLKFLNTDRERHIMKEMLCLVFSSHNGVSESEALDLFPELEWAALSSLLY
HLNRLCIVTLRCGLIRFQHLQACEAVRLEFLGGGSGCASYREKLIHYFNQQLSQDCVTWR
VADELPWLFQQQEDKTKLQLSLLNLFVSQNLYKRGHFSELLAYWQYVGKDKSSMATEYFD
SLKCYEKSCESEDSMTKLANLYETLGRFLKDLGLPSQAVAPLQRSLEIRETALDPDHPSV
ARSLHQLAGVYVQWKKYGNAEQLYKQALEISENAYGAEHVAVAQELESLAMLYQKQNKYE
QAEKLRKRSVRIRQKTARQKGQMYGFTLLRRRALQLEELTLGKDSADCAKTLNELGVLYY
LQNNLDAAKVFLARSLEMRQRALGPDHPDCAQSLNNLAALHTERREYETAEDMYERALEI
RRKALSPDHPSLAYTVKHLAMLYKRRGKLEKAVPLYELSLEIREKSFGPKHPSVATALVN
LAVLYCQLKKHSEALPLYERALKVYEDSLGRSHPRVGETLKNLAVLSYEEGDFERAAELY
KRAMEIKEAEPSLVCGNAPSHHSSSGDTFSLKTPAPQPHAAR
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccgcatcctctttggtcagtccaggagaggtgatcgaggatggatatggcggt
gagggaggggaagcatgtgagatacccgttgaagttaagcccaaagcccgactccttcgc
agctccttccgccgtggacctcgagttatcggggccagtttcaaatccacgggctccgtg
gacctggagtatgctgcagagtacgagagacttcgtaaggagtatgaaatctttcgcgtc
agcaaaaataacgaggtcacatccatgcagaagaaggaggccaaattggacgtggagaac
aagaggttaagagccgagctgcaggctcttcagaaaacctaccagaagattctcagagag
aaagaggctgctcttgagacaaagtaccaagctatggagagagctgccacatttgagcat
gacagggacaaagtaaaacggcagtttaagattttccgagagacaaaagagaaagagata
caagatctgttgcgtgcaaagagggatctggaggccaaattgcaacagttgcagactcag
ggtattcacatgtttagccctaatgactctgactcagatgataatcaaaccactgtgact
gctgtaggaactcagtgtgaatactggtctggtggggtgctgggaagtgaaccttctatg
ggtagcatgatgcagctgcaacagacattcagaggaccggagtttgcacacagtttaata
gatgtggaaggaccgtttgcaaatgtcagcagagatgactgggatgctgcggtggccagt
ctacttcaagtgtcacctcatgtaccccaggccttatggagtaacaccgtgcgctgctac
ctaatctccacacaagataccaaagcagagatggagatctttgtcaagaaacactctgta
gtgttacggagaatgtgtgagggtctgggccatttctacttaaacgtttacttcccagag
gagaatgctgcttcatacgctatggtgcggaggcaggaaatcgagcgaagttcaatatgt
gtgcttcttctcaaatccaccgttacaagccctgtggtggaagattgtgaggaggctttt
gttaaaaacccagatggacatccactggtgctgtacctcaggactgaagaggacaggggt
ttgactggacccattaggcagctgttggaaaggattaatgctgcagacaaggctgccaaa
gtcaaggtggtggatcacagcagctctgcagaagaaggggctagcctgatttatgctcag
ctagagaaagtcatcaaacaggaattgttgggttttgaaggaggagatgatgactctaag
gatgctgccatagacgagggccgtgaggaagacctgggagacgtgctttgggatctgcat
gacgaacaggagcagatcgagtcctaccaacaggcttgcagcagcaccacctcccaatta
ggttttcaaaagtatatagatcgtttaaacgacatgatagctgccccacctcccaccccg
cctctgctggtgtctggcggtccaggctcaggaaagtctctcttgctttccaaatggatt
gagctgcagcagaagcaatccccaaacactttgttcctttatcattttgtcggccgccca
ctttccataagctctgagccagttctcattatcaaacgcctcacagtgaagttgctgcag
cacttttggtccatttctggtttatccatggatcccagtaagattttggaagagtttcct
cgctggctggagagactatctgcacggcaccaaggaaacatcatcattatcattgactca
gtcgaccaaataaagcaagctgaaagacacatgaagtggctgatcgaccctcttcctgta
aaagtcagagtggttgtgtctgtcaatgtagagacgtgtcctcaggcgtggaggttgtgg
cccacacttcacttggacccacttagtgccagagaagtcaagagtgtagtcagtgcagag
tgtcaaaccatggatttcaggctcaccaaggatcaggagaaaaagctggaaaggcactgc
cgctctgcatcgacatgcaacgcattatatgtcacactgttggcaaggatgatcaccagt
tttcaatctggctggtctctggagaagagcttggagcagtgtctgcagtgtcaggacacc
ttgtctctgttccgcctggcgcttaaaatgatgttaaagttcctcaacacagacagagag
agacacataatgaaagagatgctgtgccttgtattttccagccacaacggagtgagcgag
tcagaggcattagatcttttcccagagctagagtgggccgctctgtcttctctgctctac
cacctgaacagactctgcattgtgacccttcgctgtggactcatcaggtttcagcacctg
caggcttgtgaggctgtgaggctggagttcctaggtggaggaagtggttgtgcttcttac
agagagaaactaatccattacttcaaccagcagctcagccaggactgcgtcacatggcga
gttgcagatgagcttccctggctgttccaacagcaggaggacaaaaccaaacttcagctc
agtcttttgaacctctttgtctcccaaaacctttacaagaggggtcatttctctgagttg
ctggcttattggcagtatgtgggcaaagacaaaagctccatggcaactgagtattttgat
tccctaaaatgttacgagaagagctgtgaaagcgaggacagtatgacaaagcttgcaaac
ctttatgaaactttaggtcggtttctcaaagacctgggcctgccaagtcaggctgttgct
cctttgcaaaggtctcttgagatcagagagacagccctggatcctgaccatcccagcgtt
gcacgctccctgcaccagctggctggagtttatgtccagtggaagaagtatgggaatgct
gaacagctgtacaagcaagcacttgagataagcgagaacgcctacggcgctgagcatgtt
gctgtggcacaggagctggagtcactcgccatgctttaccagaagcaaaacaagtatgaa
caagctgagaaactcaggaagaggtcagtaaggattcggcaaaagacagcgcgacaaaaa
ggtcagatgtatggattcactttgttgagacgtagagccctccagctagaagagctgacc
ctggggaaagactctgcagactgtgctaagacgctcaatgagctgggtgtcctctactac
ctccaaaacaacttggatgctgccaaggtgttcctggctcgctctctggagatgcgccaa
cgtgccctcggtccagatcacccagactgcgcgcagtctctcaacaacctggccgcgctg
cacacagaacggagggagtacgaaacggccgaggatatgtacgagagggcgctggagatc
cgcaggaaggccctgtcaccagaccacccctctctggcgtacaccgtcaagcacctggct
atgctctataaacgcagaggcaagctggagaaagccgttccactctatgagctttctctg
gaaatcagggaaaaaagttttggtcccaaacacccaagtgtggccacagcactggtgaac
ctcgctgttctctactgccaactgaagaagcacagtgaggccttgccactttatgagcga
gcactcaaagtctatgaagatagtttgggccgctcacatccgcgggtcggagaaaccctg
aagaacctcgctgttctaagttatgaggaaggtgactttgagagggctgcagaactttac
aagcgtgcgatggagattaaagaagcagagccgtcgttggtgtgtggcaacgctccgtca
catcattcctccagcggagacacttttagtctgaagacgcctgctcctcaaccacatgct
gcaaggtga
DBGET
integrated database retrieval system
