Xiphophorus maculatus (southern platyfish): 102236137
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Entry
102236137 CDS
T02923
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xma04131
]
102236137
Membrane trafficking [BR:
xma04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
102236137
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
LRR_5
Ig_3
LRR_4
ig
Ig_2
V-set
LRRNT
C2-set_2
LRR_9
Motif
Other DBs
NCBI-GeneID:
102236137
NCBI-ProteinID:
XP_005797456
Ensembl:
ENSXMAG00000020336
UniProt:
M4B0Y7
LinkDB
All DBs
Position
13:1429494..1438524
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AA seq
609 aa
AA seq
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MFKGTAAHLCLYWRAVYLLAAGVALPSESLWLCPPSCRCNAAALEANCSGAQLSAVPVGL
PQDAELLNLTHNTIKTLVNQQFHKLTQLLHLDLSDNLLALIEVEAFLGLQNLLTLRLSRN
HLRIISVGVFAGLTNLQLLDISSNKILVLLDFTFTDLGSLQVFLADNNDFVFISNQAFAG
LSGLQRLDLDGSNLTVVPTEALTQLIVLKSLHIHQLDLNLLPNYSFYPLLHLKELVVAHF
PRLETLSGNSLFGLNLTSLSIKHCNLKEVPYTALHHLVYLVSIDLSFNPITHIHGNLLGD
LLRLQEFHLVGGSLASIETGAFKGLGYLSVLNVSQNLLTTLEAGSFHSVVTLKSLGLDNN
PLACDCRLLWVARRRLYVNFGGCLPTCMTSTQLQGWNFLEFSEDELLSLLTCRQARIVDR
RPQDVRVSQGHSVVFYCSSEGDPQPSVSWLNPQLRQVPPVGRIRALSNGSLEVRYAQPHD
SGTYICVASNAAGNESLRVSLHVQALPSSPKKRYRLTGWPAFPSSPPGVDGDEKLPFDVK
TLLIAATIGFVSFFGSVSVCFVFMFFWSKGKGQIKHTATIAYVPRSAMSNSNTGTSNYME
TSRFTMKLL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaggggactgcagcccacctgtgtttgtactggagggctgtgtacctgctggct
gcaggggtggcgctaccgtccgaatccctctggctgtgtccaccatcctgtcgctgcaac
gccgctgctctggaggcaaactgctccggcgctcagctcagtgccgtgcctgtcggtctc
ccccaagatgccgagctgctcaacctgacccacaacacgatcaagactctggtgaatcag
cagtttcacaaactaactcaacttttacacctcgatttaagtgacaatctattggcactg
attgaagtggaagccttccttggcctgcagaatctgctcacgctgcgtctttctcgcaat
cacctcaggatcatctccgtgggagtgtttgctggtttgacgaacttgcagttgctagat
ataagcagcaataagattcttgtcctcttagactttaccttcacagacttaggatctctg
caggtttttctagcagacaataacgactttgtttttatctctaatcaagccttcgctggg
ctgagtggcctacagaggctggatcttgacggctctaacctcactgttgtgccaaccgag
gcgctcactcagctgattgtgttaaaaagccttcacattcaccagctggacctcaacttg
ctgccaaactactctttctaccccctgctgcacctaaaggagctcgtcgttgcacatttc
cccaggctggagactctgtcaggaaacagtctgttcggcctcaatcttacatccttatcc
atcaagcactgcaaccttaaagaggtgccatacactgctttgcatcaccttgtttacctc
gtgtccattgacctttctttcaaccctataacccacatccatgggaacctgcttggagac
ttactccggctccaagagtttcatctcgtcggtggctcactggcaagcatcgaaactgga
gcatttaaaggtttgggatatttaagtgtgctgaatgtttcacaaaatcttctcactact
ctcgaggcagggtctttccattcagtggtcaccttaaaaagcctggggctcgacaacaac
cccctcgcttgtgactgccgcctgctttgggtggctcgaaggcggctgtatgtgaacttt
ggtgggtgtctgccgacctgcatgacttccacccagctgcagggctggaattttctggaa
ttctccgaggacgaactactgagcctgctcacctgccggcaggctcggattgtggaccgg
aggcctcaagatgtgagagtgagtcaaggacactctgtggtgttttactgcagctcggaa
ggtgacccccagccatctgtcagctggcttaatccccagctaaggcaggttccacctgtg
ggcaggatacgggccctctccaacggctccctggaggtgcgctacgctcagccacatgat
agcggcacttatatctgcgtggcgtccaatgcagcgggaaatgaaagcctgcgcgtcagc
cttcatgtccaagccttgccatcatctcctaaaaaacgctatcgtcttacaggctggcct
gcctttccttcctctccccctggagtggatggcgatgagaagctcccgtttgatgtgaag
actcttctgatagcagcaacgatcggattcgtctcattcttcggctcagtgtccgtgtgc
ttcgttttcatgttcttctggagcaaaggaaaggggcaaatcaagcacacggcaacgatc
gcctacgtgccacgcagcgccatgtccaacagcaacacagggacgtcaaactacatggag
acgagcaggttcaccatgaaactcttatga
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