Xiphophorus maculatus (southern platyfish): 102236152
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Entry
102236152 CDS
T02923
Name
(RefSeq) trichohyalin-like isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xma04131
]
102236152
Membrane trafficking [BR:
xma04131
]
Autophagy
Other autophagy associated proteins
Others
102236152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
Motif
Other DBs
NCBI-GeneID:
102236152
NCBI-ProteinID:
XP_023190169
UniProt:
A0A3B5RBM5
LinkDB
All DBs
Position
1:24138238..24161253
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AA seq
956 aa
AA seq
DB search
MKIRRLKVYVKAALNDRPRRRRRTGAVKEQPHRLLAKLCPLWFLSPSRHLFVSVGVKHRR
FPEGFTPKPQALETARRAGDSSDNLLRSTKEEGGREKKEGGTEQSLEKLTLRCYVGYLLN
KLRVHTYTTRRPSWAASWKLGLLKHHEGVKVGAEMAELEIDQSNLPRVQEVCQNFAVLED
GVLAHSLQEQEIEQYYTTNIQKNQLVQNDIRVARRLQQEEEQQRAQQSALLRQVSRQMEE
QDFEYARVIQEELQRRAEEVHRREQDDEEIAKQLQEEEEQQVRRRSQDQEDFHEGSTSDP
ALPSSHHHTFSSPHRGQQQYSPVTSRWQHSTTHRGSVLTGPQTSSPRGAASQSSTTSWSN
QGHVDTSRQRRPELREPVNEDSEDSDTVFTEQLSLWARRLYDRANTAPRLQQTSLRPPQE
RNYRSLCTRSSFAKDLTGRKEESKNFEEDYYKNDNVQSRISRNVEYDSDEHEGRTQEADS
RPAEACERRCRRSESVSVHNRSRHRNRDLARTWSCKENPDKHVRFQDDPREPIRQQNDSL
KVWEMLGHILQERGVPVKVGGSGAPLQIRPQRRDSQVLYGSEVSYGDSQPHQRAFQRAAA
TRHSFHGDIRQRRRLSRGESFGRDHRADQDRRNYNREVCDRNSGEPLIFDRGTSWSEHKY
VNIENNRERKANHTRVKRVTSERRHWHKITEETLSSDEEQEAERRAERPRRRALHRSQSF
SSSRGSTRHRSRHIAAGASLQLEPSEAGLDPGDLNQVLQDEELARKLQEEEDKQLRRTSL
RNSYPEGDFRVAQVAQDEEIARFMQKQEIKAKRRSRELEGPGSWHEHRAMINHHDRRAAR
ERQVYRERLDSEGLPSPTEDCSPDNQPPSPVHAIPKAQQMRNIAEELDPTYQGRVHVPES
FQAGQSGQTSEALPTAQSGLQDLTLEEPTFIPPTKRQADKSGRSKPKEKREGCKQQ
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgaagattcggaggctgaaggtgtacgtgaaggcagcattgaatgaccgcccccgccgc
cgccgccgaacaggagctgtgaaggaacagccccacagactgctggctaaactttgtccc
ctctggtttctctcaccgagccgacacctctttgtttctgtcggggtcaagcaccgccgc
tttcccgaaggcttcacaccgaaaccacaggcgttagagacggccaggcgcgctggtgac
agctccgataatttgctgagatccacaaaagaggaaggaggaagggagaagaaggaaggt
gggactgaacagagcttggagaagttgacacttcgttgttatgttgggtacttgttgaat
aagctgcgtgtacacacatatacgacacggcggccttcgtgggcagcgagctggaagctg
ggtcttctaaaacaccatgaaggagtgaaagtgggggcagagatggcagagctggagatc
gaccagtccaaccttccacgtgtccaagaagtttgccagaactttgctgtgcttgaggat
ggagtgttggcacacagcctacaagagcaggagattgaacaatactacaccaccaatatc
caaaagaaccaactggtgcaaaatgacatccgggtagcccggaggctgcagcaagaggag
gagcagcagcgggctcagcagagcgccctgctcagacaggtttccagacaaatggaggag
caggactttgaatacgcccgggtgattcaagaagagctccagcgacgcgctgaggaggta
cacaggagggagcaggacgatgaggaaatagctaaacagctgcaggaagaggaggagcag
caggtcaggaggaggagtcaagaccaggaggattttcatgaaggtagcaccagtgatcct
gcgctgccgtcctctcaccaccacacattcagcagccctcaccgaggacagcagcagtac
tcgcctgtcaccagcaggtggcagcattctaccactcatcgtggttcagtgttaactggg
cctcagactagttctcccaggggagcagcatctcagagcagcacaacttcatggtcaaat
caagggcatgtagataccagcaggcaaagaaggcctgagctcagagagcctgtgaatgag
gattcagaagactcggacactgtttttactgaacagctctctctttgggcccggcgactg
tatgacagagcaaatactgcacctcgtctacaacagacttctttaagacccccgcaagag
aggaattacagaagtctgtgcactcgcagcagcttcgcaaaggacttaacaggcagaaag
gaggagagcaaaaactttgaggaagactattacaaaaatgataacgtgcaatccaggata
tctaggaatgtggaatatgacagcgatgaacatgaaggcaggactcaggaagcagatagt
aggccagccgaggcctgcgaaaggcgatgtcgccgcagcgaatcggtgagcgtacacaac
cgaagcagacacagaaacagagacctggcaagaacctggagctgcaaggagaacccagat
aaacacgtccgctttcaggatgatccgagagaaccgattaggcagcagaatgacagcctg
aaggtgtgggagatgctcggccacattctgcaggagagaggtgtgcctgtgaaggttggt
ggcagtggggcgccgctgcagataaggcctcaaagaagagacagccaggtgctttatggg
agtgaggtctcctatggtgactcccaaccacatcagagagccttccaacgagccgccgcc
actaggcacagtttccatggagatatcaggcagaggaggagattgtcacgcggagaaagc
tttgggagagatcacagagcagaccaagacaggcgtaattataacagagaggtttgtgac
cgcaatagtggagagcctcttatctttgacagaggcacaagttggagcgaacacaaatac
gtaaacattgagaataacagagagagaaaagcgaatcataccagagtaaagagggtgacg
agcgaacgcaggcattggcacaagatcacagaagaaacgttgagctcagatgaggagcag
gaggcggagagaagagcagagcgtccaaggcgacgagcgctacatcgtagccaaagcttc
agcagcagcaggggttcgaccagacacaggtcgaggcacatagcagcaggggcttctctg
caactagagccaagcgaggcaggcctggatccgggagacttgaatcaggtcctacaagat
gaagaactggcccgcaagcttcaggaggaggaagataaacagctaaggaggacatcttta
cgcaattcctatccagagggggacttcagggtagctcaggttgcacaagatgaggaaatt
gcacgttttatgcagaagcaggaaattaaggcaaagcgaagatctcgtgaactggaaggg
ccaggatcttggcatgaacacagagcgatgatcaatcaccacgacaggcgagccgcaaga
gaaagacaggtgtatcgagaaagactcgactcggagggtctcccctccccgactgaagac
tgctcaccagacaaccagccacccagccctgttcacgccataccaaaagctcagcagatg
agaaacatagcagaggagctggacccgacctaccaggggcgagtgcacgtcccagagagc
ttccaagcagggcaaagtggtcaaaccagtgaggcgctccccacagcccaatccggctta
caggacctaaccctggaggagccgacgttcataccaccgacaaaacgacaggcggataaa
tctggacggagtaaacccaaagagaaaagggaaggatgcaagcaacaataa
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