Xiphophorus maculatus (southern platyfish): 102236192
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Entry
102236192 CDS
T02923
Name
(RefSeq) tetratricopeptide repeat protein 28-like isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xma03037
]
102236192
Cilium and associated proteins [BR:
xma03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
102236192
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_8
TPR_2
TTC28_C
TPR_10
TPR_MalT
TPR_17
TPR_BSK1_C
Rapsyn_N
RPN7
TPR_16
TPR_NPHP3
TPR_11
PUB
TPR_6
TPR_9
TPR_14
Motif
Other DBs
NCBI-GeneID:
102236192
NCBI-ProteinID:
XP_014329173
Ensembl:
ENSXMAG00000004477
UniProt:
A0A3B5PYX1
LinkDB
All DBs
Position
8:24560502..24675699
Genome browser
AA seq
2546 aa
AA seq
DB search
MEKPRARKEKFSLFGSRSTIRATNPSSSSSRSSSPGIPSAKVGKRRDRISGSGGPAALSK
AEFLERVRRSNQACQQGEFALAVRLYTEALIADPQNCILYSNRSAAYLRLGQHGKALDDA
IKARLINPKWPKAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPL
RDTLELTYQQLQRMKLDKSPFVVVSVIGQELLTHGYHGASVVVLEAGLKIGTCSLKLRGS
VFSALSSAYWNLGDVEKSMAHMQQDLEVTKTLGDQSGECRAHGNLGSALFSKSSYREALA
HHRNQLVLAMKLKDREAASGALSSLGHVYTAIGDYPNALASHKQCVLLARQTRCQLSEAR
QLGDMGAVYTALGDFPNAVQCHEQHLDIAKSMENRREEARAYSNLGSTYHSQRDFDKAIS
YHTKVLELARELSDRSIEMRAFAGLGHAARCMQDLERARQYHQSQLEIAQELQDRAAQGR
ASSNLGIIHHMKGEYETALKLHKAHLSLAQELGDYAGQGRAYGNMGNAHHALGVYDQAVR
YHRQELQISLEVNDRQSQASTHGNLAVAYQALGAHDRALQHYRHHLTIARELRDTQTEAR
ALANLGNFHSWRGEYAQALPYYQQYLVLSPRLQDLEGEGKVCHNLAYAHYCLGQYKNSVR
YYEQDLALAKDLQDKLAQAKAYCNLGLAHKALGEYIQAEECQRYLLSLAQALDNTQAVFR
AYGNLGDVFVCRGDPSGALKFYQQQLAVAQKAADQKTEADAYAALGSVHRLLRQLDAALS
FHSRELTLRKDLADPQGECRALGRLAAVHMALGDYTTTFQCYEGQLGLAQGLRDARLEAQ
VHGNMGITKMNMAMFEEAIGYFEQQLAMLQQLSGSEGMLDRGRAYGSLADCYDALGDYEE
AIQYYEKYLTVAQSLNHVQDQEKAYRGLGNAHRSMGSLQQALVCFEKRLVVAHELGGEGG
GKAQAYGELGTLHSQLGNYEQALSCLEHQLSIARSAGDKSLEAEASDALGGVYQLMADNE
TALQWHQRALSIAEQTGCVRSQGRAYGNLGLTYEALGKYERAVVFQEQHLSVAAQTNDLT
AKTLAYGSLGRTHHALQNYTQAVMYLQEGLRLAEQLSRREDEAKIRHRLGLSLWAGGNLE
EAQHQLYRASALFETIRHETQHNLDYKLSLFDLQTSSYQALQRVLVSLGRHNEALAIAER
GRTRAFADLLVERQRGSRQASGADPYTPVTVENILETVNSQKALILYYSLAGGFLYSWLI
SPGTGIVKFNEAYLGEAGPEASEFQDGGGSPHGGGPVSLDQYICNAREALGVDSHHSRVC
SGSETESEAGDLLEQQFEELNNNLAAAADPTGYLRMVSRNNRFNRSCRSMTSLYSATVSP
VKDGLSPVCRPSNVGKPPLRALYDLLIAPMEGGLMHSSGPVGRNRQLVVVLEGELYLIPF
ALLKGSSSNEYLYERFNIISVPSLASLQATSKPQPRPSGLLLCPDGGSVAAVVGAPHLPP
SVMDRWLWGPLPSAQDEALSLGEQLGCHPLTGANATKERVLAALNQAECVHFATHTSWKL
AAIVLSPNHERSTGDGPQENSLRGTAALADGADQERKLERLFPRSHSSPERLRGPEERSE
DGESVCGVESVCDSAPLHDFLLTAADILDLCLSVKLVVLRSYPESSCRVTADGVVGLTRA
FLAAGVQCVCVSLWPVPVAASKLFMHTFYTALLNGSKASVALTEAMRNLQSSKHFSHPSN
WAGYLLIGSDVKLNSPMSLVGQALAEILQYPEKARDALRVLLHLVEKSLQRIQSGHCNPM
YTSQQSVENKVGGVPGWQALLSAVGFRLEVSVCGGGLPAAVFFPTSDPGDRLQQCSTTLQ
SLLGLTPPALQALCKLVTTSEAGEQLIHKAVKSMVVTLHQVLVQLQSGDKEQDFPLVPIQ
VSISVQLWRLPGCHEFLAALGFDLCEVGQEEVVLKTGKQASRRNMHFALQALLALFDSTE
LPKRLSMDSSSSLESLSSSQSASQPQSLPLALSCYPPQPSFLPPGCSDNLSCDAISVYSL
SSLASSLSFLSRPEPAGSDIISHRSHPQEPEKQGGGKGLYYSSQRLARGRLANHGGASAG
GEDEEYEGFSIISSEPLGRAGRECDTLPLPAGHRQGRGGSGRGSAVGQTLIVSSKGSIST
PTSPLKAPPLALPDHPSSKVTQKISLPTRTVKGKASSSESDQSSTETDSTVKSQEERMGP
AGQLDPHELAQKILEETHSHMQAVETLQKANTRVTSLRGAGGREDPHTRQPSVSTPTTPT
FKPTRGARGFQPSETSAFSRPPSRASLKAGSSPFTAHKHLSPHPSDSRPPPTPPKPPSRS
SSLQKINTSASSSPSSSLLAKERKSPVVSDEPAQHKPKYSGSPYSCHISPSPSPADSATS
PALSYSSGGSISAASSPTNPSELSQSKQDNKVQAMHNLKTFWAGVGQKQEAPGRLASLRG
GSKKMSTVQKDVLGLLNLSPRHGSSRKHADRQEDHDRPNGHRKLEPKPPLAPSSGLPTNH
KGGIKLPSGNGYKFLSPGQFFPSSKC
NT seq
7641 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagcccagagcgaggaaagagaagttctccctttttggctctcgctccaccatc
agagccaccaacccttcctcctcatcctctcgctcttcatctcccgggatcccctcggcc
aaagtcgggaaaaggcgggatcggatttctggctccggcggtccagccgccctgagcaaa
gccgagttcttggaacgtgtgcgccgcagtaaccaggcctgccagcagggggagtttgca
ctggctgttcgtctctacactgaggccctcatcgcggacccgcaaaactgcatcctgtac
agcaaccggtctgcggcctacctcagactgggtcagcacggcaaggctctggacgacgca
atcaaagcccgtctaattaaccccaagtggcccaaggcctactttcgacaaggggttgcc
ctgcagtacctgggtcgtcatgccgatgcgctggcggcgttcgcgtcgggcctcgcgcag
gatcccaagagtctccagctgcttgtcggcatggtggaggcggcaatgaaatcaccactc
agagacactcttgagctcacctaccagcagcttcagaggatgaagctggacaagagcccg
ttcgtggtggtgtccgtcatcggccaggagctgctgacgcacggttaccacggcgcctcg
gtggtggtgctggaggcggggctgaagatcggcacgtgctcgctgaagctccgcggctcc
gtcttctccgctctcagctcggcgtactggaacctcggagacgtggagaaaagcatggct
cacatgcagcaggacctggaggtgaccaagactctaggagaccagtcgggtgaatgccgg
gctcacgggaacctcggctcggcgctgttctctaaaagcagctacagagaagcgctggcc
caccacaggaaccagctagtactggccatgaagctcaaggacagagaagcggcgtcgggc
gccctcagcagcctgggccatgtgtacaccgccataggggactaccccaacgctctggcc
agccacaaacagtgtgtcctgctggcccgccagacccggtgccagctgtctgaggcgcgc
cagctgggcgacatgggtgccgtttacaccgcactgggagacttccccaacgccgtccag
tgtcacgagcaacacctggatatcgcgaagtctatggagaaccggagagaggaggcccgg
gcgtacagcaacctgggcagcacctaccactcgcagcgggactttgacaaggccatatct
taccataccaaggtgctggagttggcgcgggaactgtcggacagatcgattgagatgagg
gcgttcgccggtctgggtcacgctgctcgatgcatgcaggacctggagagggcccgtcag
taccaccaaagccagttagagattgctcaggagctgcaagacagggcggcacagggccgg
gcttcctctaacctgggcatcatacatcacatgaagggggagtatgaaacggcgctgaag
ctccacaaagcccacctgtcactggcgcaggaactgggtgactacgcggggcagggcagg
gcctacgggaacatgggcaacgcccatcatgcgctgggcgtctacgaccaggcggtgcgg
taccacaggcaggagctgcagatctctctggaggtgaacgatcgccagtcgcaggcctcc
actcacggtaacctggcggtggcctatcaggcgctgggagctcatgaccgtgctctccag
cattaccgtcaccacctgaccatcgcacgggaactcagagacactcagacggaagcgaga
gccctagcaaacctggggaacttccacagctggaggggagagtacgctcaggctctgccc
tactaccagcagtacctggttctgtccccgcggctgcaggacctggagggcgaagggaaa
gtctgccacaacctggcctatgctcactactgcctgggacagtacaaaaactctgtcagg
tattatgagcaggacctggccctggctaaagacctgcaggacaaattagcacaagctaaa
gcctactgtaaccttggtttggcccacaaagctctcggagagtacatccaagcagaggag
tgtcagagatacctgctctctctggctcaggctctggataacacacaggcagttttcagg
gcctacgggaacctcggggacgtgtttgtgtgtcggggggatccgtccggagcgctcaag
ttctaccaacagcagctggctgtggctcagaaagctgccgaccagaagacggaagccgac
gcgtacgctgcactgggatcagttcacaggctgctccgccagctggatgctgcgctgtcc
ttccacagccgggagctgactctccgtaaggacctggctgacccccagggggagtgccgg
gccctgggccgcctggcagcggtccacatggcactgggcgactacaccacgaccttccag
tgctacgagggccagctggggctggcgcagggcctccgggacgctcgattggaggcccag
gtccatgggaacatgggcatcaccaagatgaacatggcgatgttcgaggaagccatcgga
tacttcgagcagcagctggccatgctgcagcagctgagcggcagcgagggcatgctggac
agaggcagggcctatgggagcctggccgactgctacgacgccctgggagactacgaggag
gccatccagtactacgagaagtacctgacagtggctcagagtctcaaccacgtccaggac
caagagaaggcctacagaggcctgggaaacgcacacaggtccatgggcagtctccagcag
gcgctggtgtgcttcgagaagcggttggtggtagcccacgagctgggcggcgagggcggg
gggaaggcgcaggcttacggggagctgggcaccctgcacagccagctggggaactacgag
caggccctgtcctgtctggagcaccagctcagcatcgctcgctcagcgggggataaatcc
ctggaggccgaggcgagcgacgccctgggaggcgtttatcagctgatggcagacaacgaa
actgctctgcagtggcaccagagggcgctgagcatcgccgagcagacgggctgcgtgagg
agccagggccgcgcctacggcaacctgggcctgacctacgaggctctggggaagtacgag
cgggccgtggtgtttcaggagcagcacctcagcgtggcggcgcagaccaacgacctgacg
gccaaaactctggcctatggaagcctggggaggacacaccacgccctgcagaactacact
caggctgtgatgtacctgcaggaaggtctgcggctggctgagcagctgagccggagagaa
gacgaagccaagatccgccatcgcctcggtctttctctgtgggccggcggcaacctggag
gaggcacagcaccagctgtacagagcttctgcgttgttcgagacaatccgccatgagacg
caacacaacctggattacaagctgtccttgtttgatctgcaaaccagctcgtaccaggct
ctccagagagtcctcgtcagcctagggcggcacaacgaggctctggccatagccgagcgg
gggcgcactcgagcgttcgccgatttgctggtggaacgccagagaggaagcaggcaagcg
tccggcgccgacccttacaccccggtcaccgtggagaacatcctggagacggtcaacagt
cagaaggcgctgatcctctactattcgctggctggaggctttctctacagctggctcata
tctccaggcacaggcatcgtgaagttcaacgaggcgtacctgggagaggcggggcctgag
gcctctgagttccaggatggcggtgggagcccgcacggcggaggccccgtgtctctggat
cagtacatctgcaacgccagagaggctctgggagtggacagccatcacagcagagtgtgc
tccggcagtgagacggagagtgaagctggagatctgctggagcaacagtttgaggagctg
aacaacaatctggccgccgccgccgatccaaccggctacctgcgcatggtgtccagaaac
aaccgcttcaacaggagctgtcggagcatgacgagcctttacagcgccaccgtgtctcca
gtgaaggacggcttatctcctgtttgccgaccgtctaacgttggcaaacctcctctacga
gccctctacgacttactcatcgctccaatggaagggggtctgatgcacagcagtggacct
gttggcaggaacaggcagcttgtggtagttctggagggagaattgtacctgattcccttt
gccttgctcaaaggcagctcctccaatgagtacctgtatgaaaggtttaacatcatttct
gtaccgtctctggccagcctgcaggctacaagcaagcctcagcctcgccccagcggtctc
ctgctgtgtccggatggaggctcggtggccgccgtggtcggggcccctcacctgcctccc
agcgtcatggaccgctggctgtgggggcctttaccctcggcccaagacgaggcattgtct
ttgggtgagcagctgggctgtcaccccctgaccggggcaaacgccaccaaggagcgcgtc
ttagcggcactgaatcaggccgagtgcgttcactttgcgacccacacgtcctggaagctc
gccgccatcgtcctgtcccccaaccacgagcgcagcaccggggacgggccgcaggagaac
tctctgcgcgggacggcggcgttagcggacggcgcggaccaggagaggaagctcgagcgt
ttgtttcccaggagtcacagcagcccagagagactccgaggaccggaagaaagaagcgag
gacggggagagtgtttgcggagtggagagcgtgtgcgacagcgcgccgctccacgacttc
ctgctcactgccgccgacatcctggacctgtgcctctcggtcaagctggtggttctgagg
tcgtacccggagtccagctgtagagtgacggccgacggagtggtgggtctgacccgggcc
ttcttggctgcgggcgtccagtgtgtgtgcgtgtctctgtggccggtgccggtcgctgct
tccaagctcttcatgcacacgttctacacggcgctgctaaacggcagcaaagccagcgtg
gccctgacggaggccatgaggaacctgcagagcagcaagcacttctcacacccctccaac
tgggctggttacctgctgataggcagcgatgtgaagctgaacagccccatgtcgctggtg
ggacaggccctggcagagatcctgcagtacccagagaaagccagggacgccctcagggtg
ctgctgcacctggtagaaaagtcgttgcagcgcatccagagcggtcactgcaaccccatg
tacacgtcgcagcaaagcgtggagaacaaggtcggcggcgttcccgggtggcaggccctc
ctgtccgccgtgggcttccggctggaggtctccgtttgcggtggcggactcccggcggcc
gtgttcttcccgacctctgaccccggagatcgtctgcaacagtgcagcaccacgctgcag
tctctgctcggtctgactcctccggctctgcaggctctgtgtaagctggtcacaacatct
gaagcaggagaacagctcattcacaaggccgtgaaaagcatggtggtgacgcttcatcag
gtcctggtgcagctgcagtccggcgacaaagagcaagacttccccctggttcccatccag
gtgtcgatcagcgttcagctatggaggctgccgggctgccatgagttcctggctgctctg
ggttttgatctgtgcgaggtcggtcaggaggaagtcgtcttaaagacgggaaaacaggcc
agcagacgtaacatgcatttcgccctccaggcccttcttgccctgtttgactccacggag
cttcccaagcgactgagcatggacagttcgtcgtctttagagtctctgtcgtcctcccag
tcggcctcccagcctcagtctttgcccctcgctctcagctgttaccctcctcagccctcc
ttcttaccccccggttgctccgacaacctctcctgcgatgccatctccgtctacagcctc
agctccctcgcctcctccctcagcttcctgtctcggcccgagccggcgggaagtgacatc
atcagccatcgctcgcatccacaggagccagagaagcagggtggaggaaagggcctgtac
tactcctcgcaacgcctggcaagaggccggctggccaatcacggaggagcgtcggcagga
ggagaggacgaggagtacgagggcttctccattataagcagcgagccgctagggcgggcg
gggagggagtgcgacacgctgccgctccctgcgggacaccgacagggcagaggtggttcc
ggcagagggtctgcggtgggccagactttgatagtttcctccaaggggagcatcagcaca
cctacgtccccgctcaaagctccaccgctggcgctgccggaccatccaagctccaaggtc
acccaaaaaatctcattgcctacacgaacagttaaagggaaggctagcagctccgagtct
gaccagtcgagcaccgagacggacagcaccgtcaaatcccaagaagagaggatgggcccc
gccggacagctggatccccacgaattggcccagaagatcctggaggagacccacagccac
atgcaagctgtggagacgctgcagaaagcaaacaccagagtgacatctctgagaggagcc
gggggccgagaagaccctcacaccaggcaaccgtctgtgtctacccccacaaccccaacc
tttaaacccaccagaggggcgcgtgggttccagccgtccgagacaagtgcgttcagcaga
cctcccagcagggctagtctgaaggccgggtcgtccccttttaccgcccataagcacctt
tcaccccatccctctgattccaggcctcccccaactcctcccaaaccgccgtcccgctcg
tcatcgctgcagaaaatcaacacgtccgcctcttcttctccttcttcatctctcctcgct
aaggagaggaaatcccccgtcgtctcagacgagccggcccaacacaaacccaaatactcc
ggctcgccttacagctgccacatatcgccgtctccctctccggccgacagcgccacgtct
ccagccctttcctactcctccggaggctccatctcggcggcgtccagcccgacgaaccct
tcggagctcagccagtcaaagcaggacaacaaggtccaggcgatgcacaacttgaagacc
ttctgggccggtgtcggccagaaacaggaggcgcccggccgtttggcgtcgctccgaggc
gggagcaaaaaaatgagtacagttcagaaagacgttttgggtttgctgaacctctcgccc
agacacgggtctagcaggaaacacgcggacagacaggaagaccacgacagacccaacggg
caccgcaagctggagcccaaacctccacttgctccatcatctggtcttccaacaaaccac
aaaggaggcatcaaacttccctctgggaacggatacaagtttctctcgcctggacagttt
tttccatcttctaaatgttaa
DBGET
integrated database retrieval system
