Xiphophorus maculatus (southern platyfish): 102236243
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Entry
102236243 CDS
T02923
Symbol
gdf5
Name
(RefSeq) growth/differentiation factor 5
KO
K04664
growth differentiation factor 5
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04060
Cytokine-cytokine receptor interaction
xma04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
102236243 (gdf5)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
102236243 (gdf5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
xma04052
]
102236243 (gdf5)
Cytokines and neuropeptides [BR:
xma04052
]
Cytokines
Transforming growth factors (RSTK binding)
102236243 (gdf5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
102236243
NCBI-ProteinID:
XP_023180406
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Position
20:complement(4973119..4982228)
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AA seq
524 aa
AA seq
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MNVVTRLSLLLSCWTLFYLHPVRGSLSRSGPAERTGGTHRGSAHPSGRQPVPAAGSWKPH
AGPPLITAETIPLRGKQTAGGNPEHPHPHHHQQLEQPTGALDLGRKEAARSWPPAADARL
KPHAPAHAGGGVGVGDSPGKPGGKVAARASAAAAAARGGFPPAAQRGAAARRQKLGDKQP
LVTPHDYMLSLYWSLSSGNLNSSALHEAGLANTITSFVDRGHDDRGPMLRRQKYQFNISS
LERDGLLGAELRILRKLVSVAAADGGSVPWLKLYSCASGRQKAALLQSRTVDDLLGGFSN
KWEVFDIYKVFKGFKSQQLCLELEALEHRGGRPLDLRTLGFARPGRTNKEKAFLLAFGKS
KKRDLFYNEIKARSGHDNKTVYEYLFNQRRMRRAPPPRGAKKPLRVPSQILLQHQAAKSR
PRCHRRRLHVNFKDMGWDDWIIAPLEYDAYHCDGACDFPIRSHLEPTNHAIIQTLINSMD
PDTTPPTCCVPTRLSSISILYIDSANNVVYKQYEEMVVESCGCR
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttgtgacacgtctctctctgctgctcagctgctggactctcttctacctgcat
cctgtccgcggctccctcagccggagcggacccgcagagcgcacaggaggaacccaccgt
ggatccgctcacccctcagggaggcagccggtccccgctgcagggagctggaaaccccac
gcaggacccccgctgattacagccgagacaatcccgttgagaggaaaacagactgcggga
gggaaccctgaacatccgcatcctcaccatcatcagcagctggagcagccgaccggagcg
ctggacctggggcgcaaagaggctgcgcgctcctggcctcccgctgcggatgcacgcctc
aaaccgcacgcccccgcacatgcgggaggaggtgtcggagttggagattcaccggggaaa
cctgggggaaaggtcgccgccagggcgagcgcagcggcggctgcggcgcgcggcggcttt
cctccggcggcgcagcgcggagccgccgccaggaggcagaaactgggcgacaagcagccg
ctggtgaccccgcacgactacatgctgtccctgtactggtccctgagcagcgggaacctg
aacagcagcgcgctgcatgaggccggcctggccaacaccatcaccagcttcgtggacaga
ggacacgatgatcgagggcccatgctgcgacgtcagaagtaccagttcaacatcagctct
ctggagcgggatgggctcctgggggccgagctccgcatcctgaggaagctggtttctgtg
gcggcggctgatggaggctcggtgccctggttgaagctgtacagctgcgcttcaggccgg
cagaaagcggctctgctccaatccaggacggtggatgacctcctgggcggattcagcaac
aagtgggaagtgtttgacatttataaagtcttcaagggattcaagagccagcagctgtgc
ttggagctggaggccctggagcaccgaggaggccgtccgctggacctgcggactctgggc
ttcgctcgacccggcagaaccaacaaggagaaggcattcctcctggcgtttgggaaaagc
aagaagcgagatctcttttacaacgagatcaaagcacgttcgggtcacgacaacaaaacc
gtctacgagtatctgttcaaccagcgacggatgaggcgagctcctccgccaagaggcgcc
aagaaaccccttcgggtcccctctcagatcctcctgcagcaccaggcggccaagtccagg
ccgcgctgccaccgccggcgactccatgtcaacttcaaggacatgggctgggacgactgg
atcatcgcgccgctggagtacgacgcctaccactgcgacggcgcctgtgacttccccata
cgctcgcacctggagcccaccaaccacgccatcatccagaccctgatcaactccatggac
ccggacacgaccccgcccacctgctgcgtcccgacgcgcctcagctccatcagcatcctc
tacatcgactcggccaacaatgtcgtctacaagcagtacgaggagatggtggtggagtcc
tgcggctgcaggtag
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