Xiphophorus maculatus (southern platyfish): 102236249
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Entry
102236249 CDS
T02923
Symbol
trim32
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM32
KO
K10607
tripartite motif-containing protein 32 [EC:
2.3.2.27
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102236249 (trim32)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xma04121
]
102236249 (trim32)
Enzymes [BR:
xma01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102236249 (trim32)
Ubiquitin system [BR:
xma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102236249 (trim32)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
zf-RING_UBOX
zf-C3HC4
zf-RING_5
zf-RING_2
zf-B_box
zf-C3HC4_2
Baculo_IE-1
Vgb_lyase
zf-C3HC4_4
zf-RING_4
TEN_NHL
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
102236249
NCBI-ProteinID:
XP_023193891
LinkDB
All DBs
Position
8:15894927..15903531
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AA seq
679 aa
AA seq
DB search
MAAACSSLDPDLMREVLECPICLETYNQDKLRPKLLQCGHTVCRLCLEKLLANTINGVRC
PFCSKVSRMSSISQLADNLTVLKIIDCTLTCSAAATALMCKSCGNRLPRQFCYDCTTVLC
EVCKADGHLHEGHSVQPIKVAAEQRRKELSGRLAALRDVMGNIQKKKTTLENISKSLRQK
YRVVQQEYSSAELHLQEELSKSRRTFTASLGEVEKLNAQVLEEQTYLLNLAEVKVVSRCD
YLTVRVRQSDIALLKDDGAGSDDEELDLRSSLPTQFQLQEPTLARAEHSNPIEVGCLTTN
TYTVNTDDEKGGLETMLEFKAEDAPSGATGGSVMVPGDLYRDVDMVSAVDETVCGSPSSF
KSKSMDAGGESAGASSRPPVCQFVKKMGCKGALPGMFNLPISICVSPQGDILVADRGNCR
VQIFNRKGVPREIRRNASIDNFVLSFFGADLPNLIPLSIAVTPQGLIGVTDNYDNSVKVY
TMDGHYVACHKNQLIKPWGITAMPSGQFVVSDVEGGKLWCLAVDRNVGVISYNRLCSAVR
PKFVTCDAAGTVYFTQGLALNFEKRQNEPHFEGGFSIGSVGTDGQLGKQLSHFFSETEDF
RCITGMCVDANGDLLVTDSGRKEILQFPKEGGFNILIQEGLTCPVGVATTQKGQLLVLDC
WDHCVKVFTYVQRRHSSTS
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagcatgctcttctctggacccggacctaatgagggaggttctcgaatgcccc
atctgcctggagacttacaaccaggataaactcagacccaaactcctgcagtgtgggcac
actgtgtgtcgactttgtctggagaaactgttggctaataccatcaatggtgtccgctgc
cccttctgcagcaaggtctccaggatgagcagcatctcccagctggcagataatcttaca
gtactgaaaataatagattgcactttgacctgcagtgctgctgccacggcgctaatgtgc
aagtcctgtggcaaccggctaccaagacagttctgctatgactgcaccacagttctctgt
gaggtctgtaaagcggatggccacctgcatgaaggccattcagttcagccgataaaagtg
gcagctgagcagcgccgtaaagaactgagtggtagactggctgccctccgtgacgttatg
ggcaatattcagaagaaaaagacaacacttgaaaacatttccaagagcttgagacaaaag
taccgggtggttcagcaagagtattcttcggcagagcttcatcttcaggaagagctcagc
aaatctcgaaggacattcacagcctctttgggagaagtggaaaaactcaatgcacaggtt
cttgaggagcagacatatcttcttaacctcgcagaggtaaaagtggtttcacgttgcgat
tatctgactgtaagggtaagacagagtgacattgccttattaaaggacgatggcgcagga
agtgatgatgaagagctggacctcagaagcagtttacccacacagttccagctacaagag
ccaacactagccagagcagaacactctaatcccatagaagtgggctgtttgaccacaaac
acttacacagtcaatacagatgatgagaaaggtgggttagaaacaatgttggagtttaaa
gcagaggatgcgccctctggcgctacaggtggttctgtaatggttccaggggatctttac
cgtgatgttgacatggtttcagcagtagatgagacagtatgtggttcaccaagtagcttt
aagtcaaagtccatggatgcaggtggggaatctgcaggggctagttccaggccaccagta
tgccagtttgtaaagaagatgggctgtaaaggagcactgcctggaatgtttaatttaccc
attagcatttgtgtttcaccacaaggtgatatactggtggccgatcgagggaactgccgt
gtccagattttcaatcgtaaaggtgtcccgcgcgaaatccgacgcaatgcaagcatagac
aactttgttctgagcttctttggtgctgacctgcctaaccttatcccgttatccatagct
gtgactcctcaaggtctgattggtgttactgacaactacgataattcagttaaagtctac
accatggatgggcattatgtggcctgccataaaaaccagctgattaaaccctggggaatt
actgccatgccatcaggccagtttgtggtgtcagacgtggaaggggggaaactgtggtgc
cttgcagtggaccgcaatgtaggtgtaatcagctataaccgattgtgctctgctgtccgg
ccaaagtttgtgacatgtgatgcagcaggaaccgtgtattttacccaaggcctggccctg
aacttcgaaaagcgccagaacgagccccacttcgaaggaggcttctccattggctcggtg
ggtaccgatggccagctggggaaacagctcagccactttttctccgaaacagaggacttc
cgctgcatcactggcatgtgtgtggatgccaacggtgatttgctggtcaccgatagtggc
aggaaagaaattcttcagtttcccaaagaaggaggatttaacattctgatccaagaagga
ctgacctgtcccgtaggagtggccaccacccagaaaggacagctgctagtgcttgattgc
tgggaccactgtgtcaaagtctttacatacgtccaaaggaggcattcttcaacttcctag
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