Xiphophorus maculatus (southern platyfish): 102236253
Help
Entry
102236253 CDS
T02923
Symbol
ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xma03009
]
102236253 (ddx52)
Enzymes [BR:
xma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102236253 (ddx52)
Ribosome biogenesis [BR:
xma03009
]
Eukaryotic type
90S particles
Helicases
102236253 (ddx52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Ribosomal_S7e
Motif
Other DBs
NCBI-GeneID:
102236253
NCBI-ProteinID:
XP_023197457
Ensembl:
ENSXMAG00000010805
LinkDB
All DBs
Position
11:17772140..17778090
Genome browser
AA seq
660 aa
AA seq
DB search
MDTFELFRKLGAGAKFDLKRFGQDAARFKVARSQGGETSLDSLSAINYFGTGAANGAQSW
TQRATQDEEGIESGDSEVGGKRKRKERPGEVRHKSKKTESSRMVEDAPASGEPLTETQRG
GITWTSSLDRKIQNVQKDGTEKFSLKRLKHLHQEKVNRIRAQHRINVHGCDVPDPVCSFE
ELQSEYHLNPRVLQNLKDAGLNTPTPIQMQAIPLMMHARELLACAPTGSGKTLAFSLPLL
AHLQQPANLGFRALVISPTRELASQTYRELLRLSDGVGFRVHIIDKASLAAKKYGPQSNK
KYDILVSTPNRLIYLLHQDPPGINLSSVEWLVVDESDKLFEDGKTGFREQLATIFLACSN
AKVRRAFFSATCTPEVEKWCRLNLDNLVSVNIGHRNTAVETVEQELLFVGEENGKLVAMR
DIIKKGFLPPMLVFVQSIERARELFHELVYEGINVDVIHAERTQQQRDNVVNSFRSGKIW
VLICTALLARGIDFKGVNLVLNYDFPTSAVEYIHRIGRTGRAGHQGKAITFFTENDKPLL
RSIANVIKQAGCPVPDYMIGFKKIHSKVKRRLEKKPPSRSTICTTPRFLMKKKVKAEKKE
QKKGSNSKQKGENGPQTAQQQGRKKKTKVQKAGQKKGKPKAAAQKGGSKLAGAKLQEKNG
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggacacatttgagctgtttaggaaactcggagccggggctaaatttgacttaaagaga
tttggtcaagatgctgctcggtttaaggtggccaggtctcagggcggagaaacgtcgctg
gattccctgtctgcgatcaactacttcggcacaggagcagctaatggagcccagagctgg
acccagagagcgacccaggatgaggagggcatcgaaagtggagattctgaagtaggaggc
aaaagaaaacgcaaagagcgaccgggagaagtgagacacaaaagcaagaagacggaaagc
agccggatggtggaggacgctccagctagtggtgaaccactgactgagacccagagaggc
ggcatcacctggacctcgtccttggacagaaagatccaaaacgtacagaaggacgggacg
gagaaattctcgctcaagaggctgaagcatcttcatcaggaaaaggtgaatcgcattcgc
gcgcagcaccgtataaacgtccatggctgcgatgtgcccgacccggtttgctcgtttgag
gagcttcagtccgagtatcatctcaacccgcgcgttcttcagaacctcaaggatgcagga
ctgaacacgccaacgccgatacagatgcaggccataccgctcatgatgcatgctcgggag
ctgttggcgtgcgctccgaccggatctggaaagactttggccttctctcttccgctgctc
gcccacctgcagcagcctgcaaacctgggcttcagggctctggtcatctctccgaccaga
gaactggccagccagacctacagagaactgctgcgcctgtcagacggagtcggctttaga
gttcacatcatcgataaagcttccctggcagcgaagaagtacggtccacagtcaaataaa
aaatatgacatactcgtcagcactcccaacagactgatctacctcctccatcaggatcct
ccaggaatcaacctgagcagtgtggagtggctggttgtggacgagtccgataagcttttc
gaggacgggaagacgggcttcagggagcagctggcgaccattttcctggcatgttctaac
gccaaggtgcgcagggctttcttcagcgccacctgcacgccggaagtggaaaagtggtgc
cgcctgaacctcgacaacttggtttctgtcaacatcggacacagaaatacagcggtggag
acggtggaacaggagctgctgtttgtcggggaggagaacgggaaacttgtggccatgagg
gacatcatcaaaaaaggtttcctgcctcccatgctggtgttcgttcagtccatagagcga
gcgcgggagcttttccacgagttggtgtatgaagggatcaatgttgacgtgatccacgct
gaacgaacacagcagcagagggacaacgtggtgaacagctttcgctccgggaagatttgg
gtgctgatctgcacggctctgctcgccagaggaatcgacttcaaaggagtgaacctggtg
ctgaattacgacttccccaccagcgccgtggagtacattcacagaatcggccgtacgggt
agagctggacatcaagggaaggccatcaccttctttacagaaaatgacaaaccgttgttg
cgcagcattgctaatgttataaaacaagctgggtgccctgtgccggactacatgattggc
ttcaaaaagatccacagcaaagtaaagcgaagacttgagaagaaacctcccagtaggagc
accatttgcacaacccctcgcttcctcatgaagaagaaagtcaaagctgagaaaaaagaa
caaaagaaagggtcaaacagcaaacagaaaggagaaaacgggcctcagacagcgcaacag
cagggcaggaagaagaagacaaaagttcaaaaagcaggacagaaaaaaggaaaacctaaa
gcagcagctcagaaaggaggatcaaaattagcaggagccaagttacaagagaaaaacgga
tga
DBGET
integrated database retrieval system
