Xiphophorus maculatus (southern platyfish): 102236268
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Entry
102236268 CDS
T02923
Symbol
smc4
Name
(RefSeq) structural maintenance of chromosomes protein 4 isoform X1
KO
K06675
structural maintenance of chromosome 4
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xma03036
]
102236268 (smc4)
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
102236268 (smc4)
Condensin II
102236268 (smc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
FPP
AAA_29
HMMR_N
WEMBL
TPR_MLP1_2
COG3_N
DUF7713
Motif
Other DBs
NCBI-GeneID:
102236268
NCBI-ProteinID:
XP_023207429
Ensembl:
ENSXMAG00000018289
LinkDB
All DBs
Position
18:complement(24183502..24205454)
Genome browser
AA seq
1299 aa
AA seq
DB search
MPSKTAKTSTASKREPKRKGLQPRDDSEDELDVPPQETNSNGQEEAPPTTDPSQGEATEA
VDSRSLEEILGSIPPPPPPAMTNEPGAPRLMITHLVNRNFKSYAGEQILGPFHKRFSCII
GPNGSGKSNVIDSMLFVFGYRAQKIRSKKLSVLIHSSDKHKDVQSCTVEVHFQKIIDKEG
DDYEVVPNSKFYVSRTANRDSSSYYHIDGKKATFKEVGTLLRSHGIDLDHNRFLILQGEV
EQIAMMKPKGQTEHDEGMLEYLEDIIGSCRLKEPIQTLSRRIELLNEQRGEKLNRVKLVE
KEKNALEGEKNKAVEFLTLENDIFKHKSQLHQYYVHDLQKRVTDKEQEKLKILEETKELT
EKNAKISEEMEKMNQELQNVEKKKNKINKYIETQKGKFTQLDLQDVEVREKIKHSKSKNK
ALQKQLEKDQKKLEEVRGIPASSEQAISEATAQKEDLEKQKAKEEEKLKVVMESLKEETS
GLQQDKEKKEKELMELSKAVNETRSQMDIAQSELDIYLSRHKTALTQLNAAKQTLQTTSD
TLQERRPAIKDLQVHIPQKEKELKKDQEELEQLLKVDNDTRHVVRELQQKVDEAKSSLSS
NRSRGKVLDALMQLKKSGKIPGIYGRLGDLGAIDEKYDVAVSSCCGALDNIVVDSIDTAQ
KCVTFLKEQNIGVATFIGLDKMKVWEKNMTSIRTPENSPRLFDMVRVNDERVRPAFYFAL
RDTLVAQDMEQATRMAFQKDKRWRVVTLKGQIIEMAGTMTGGGRVMKGRMGSSIGQEVSQ
DELDRMESKLNEKVSKLHGCQERRLQLEENVQRLQPQLREMKNTLEKYTNSMSSLADQET
HLKLQIKELEANVLAAAPDKAKQKQMEKSLEAFKKDFESASSKAGKVENEVKRLHNLIVD
INSHKLKAQQDKLDKINKELDDCSSIITKAKVAIKTADRNLKKCEESIARVRAELEENEK
LMAELTEQLKKLEDEAGGIMKTCHEAEATLPEVQEQYQNVSKEIKALQQQEHALQEESLN
VRLTIEQIDAAITKHNGKIKYWQDESTKLSLHTIEGQPAEELRVFAPAELEAISDPNILV
NKISMLESQCSQMKPNLGAIAEYKKKEELYLQRVAQLDEITADRDRFKRAYEDLRKQRLN
EFMTGFNMITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSG
GEKTLSSLALVFALHHYKPTPLYFMDEIDAALDFKNVSIVACYIYEQTKNAQFIIISLRN
NMFEIADRLIGIYKTHNTTKSVGINPKTIVFREHDAITA
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atgccatctaaaacagcaaaaacctccactgcttccaaaagggagccaaaaaggaaaggg
ctgcagcctcgggatgactctgaggacgagttggatgtaccccctcaagaaaccaactcc
aatggccaagaggaggcaccgccgacaactgatccgtctcagggggaagctactgaggcg
gttgatagtcgaagtttggaggagattctcggcagcatccctccacctccgcccccagca
atgaccaatgaaccgggcgctcctcgcctgatgatcacacatttagttaatcgcaacttt
aagtcttatgcaggggagcagattctggggccttttcacaagcgcttttcctgcatcatt
ggtcccaatggaagtggaaagtccaatgtgatagattcaatgctctttgtgtttggatac
agagctcaaaagatcagatcgaaaaagctctcagtgctgattcacagctctgataaacac
aaggatgtgcaaagctgtactgtggaggtgcattttcaaaagattattgataaggaagga
gatgactacgaagtcgtccctaacagcaagttctatgtttccaggactgccaacagagac
agttcctcttactaccatatcgatggcaaaaaggccactttcaaagaagttggcacttta
ctccgcagccacggtattgatctagaccacaacagatttctgatcttgcagggtgaggtg
gagcagattgccatgatgaagcctaagggtcagacggagcatgatgaggggatgctggag
tacttggaggacatcatcggttcatgccgtctcaaagaaccgatccaaactctttctcgc
cgcatcgagctgctcaatgagcaaaggggagaaaagctgaatagagttaagctggtagaa
aaggagaaaaatgctttggagggggaaaagaataaagctgtggagttcctcaccttggag
aacgacatcttcaaacacaagagccagctccaccagtactatgttcatgatctacaaaaa
cgtgtgactgataaagaacaggaaaagctaaagattttggaggaaaccaaggagctcact
gaaaaaaatgcaaagatatcagaagagatggaaaaaatgaaccaagagctccaaaatgtg
gaaaagaaaaaaaataagatcaacaagtatatagagacccagaagggaaagttcacccag
ctggacctgcaggatgttgaagtgcgtgagaagattaaacactcaaagagcaagaacaag
gcactgcagaagcagctggaaaaagaccagaaaaagctggaggaagtgcgaggcatacca
gccagcagtgaacaagccatctctgaagcgacggcccaaaaagaagacctggagaagcag
aaagcgaaagaagaagaaaaactgaaagtagtgatggaaagtctgaaggaagagacgagc
ggcttgcaacaggacaaagagaaaaaagagaaagagctcatggaactcagcaaggccgtc
aacgagacccgctctcaaatggacatcgctcagtccgagctcgacatctaccttagccgc
cacaaaacggctctgactcagctgaacgcggctaagcaaacgctccagacgacctcggac
actctgcaggagcgccggcccgccatcaaagacctgcaggtccatatcccacagaaggaa
aaggagctcaaaaaggaccaggaagagttggaacagctgctgaaggtggataatgacacc
aggcacgtggtgagagaactgcagcaaaaggtggacgaagccaagagctccctgtcctcc
aatcgcagtcgaggaaaagtcttggacgctctgatgcagctcaagaagagcggcaaaatc
cctggaatctacggaagattgggagatcttggagccatagatgaaaagtacgatgtggcc
gtttcatcttgctgcggcgctctggacaacatcgtggtggattcaatcgacacggctcag
aaatgcgtcactttcctcaaagagcagaatatcggcgtcgccactttcatcggccttgac
aagatgaaggtctgggagaagaacatgacttccattcgaacgccagaaaacagcccccgc
ctcttcgacatggtgcgagtaaacgatgagagggtcagaccggcgttctacttcgccctg
agggacaccctggtcgctcaagacatggagcaggccaccaggatggcctttcagaaggac
aaacgctggagggtggtcaccctgaaggggcagataattgaaatggcaggaacaatgact
ggaggtggaagagttatgaaaggcaggatggggtcttctattggccaagaggtgtcccag
gacgagctcgaccgtatggagagcaagctgaatgagaaagtgtcaaagctgcacggctgc
caggagagacggctgcagttggaggagaacgtccagcgcctgcagcctcagctcagagag
atgaagaacactctggaaaaatacacaaacagcatgagcagtctggctgaccaggagact
cacttgaaacttcagattaaagagcttgaagccaatgtgctggcagctgccccagacaaa
gccaagcagaaacagatggagaagagcctggaggcattcaagaaagactttgagtcagcg
tccagtaaggccggaaaggtggaaaacgaggtgaaaagactccacaacttgattgttgac
atcaacagccacaaactgaaggctcagcaggataagctcgacaagatcaacaaagagcta
gacgactgctcctccatcatcaccaaggccaaagtggccataaagacggctgatcgaaac
ctgaaaaagtgtgaggagagcattgctcgtgtgcgagcagagctggaagagaacgagaag
ttgatggctgagctcacagagcagctgaagaagctagaagatgaggcgggggggatcatg
aaaacctgccacgaggcagaggccactctgcctgaggtgcaggagcagtaccagaacgtt
tccaaggagatcaaggccctgcagcagcaggagcacgcactgcaagaagagtcgctcaac
gttcggctgaccatcgagcagatagacgccgccatcacaaagcacaacggcaagatcaag
tactggcaggatgagagcaccaagctgtcccttcacaccattgagggccagccagcagag
gaactccgtgtctttgcccctgctgagctggaagccatctcggatccaaacatcctggtg
aacaagatcagcatgctggagagccagtgtagtcaaatgaagcccaatctaggagccatt
gcagagtacaagaagaaggaggagctgtacctgcagcgcgtcgcacagctggacgagatc
acagcggacagagacaggttcaagcgcgcctacgaggacctccgtaagcagcggctcaat
gagttcatgaccgggttcaacatgatcaccaacaagctgaaggagaactaccagatgctg
acactaggtggggatgcagagctggagctggtggacagcttggatccgttctctgaggga
atcatgttcagtgttcgtccaccaaagaaaagttggaaaaagatctttaacctgtcaggg
ggggagaagaccctcagctctctggctctggtgtttgctctgcatcactacaagcccacc
ccgctgtacttcatggacgagatcgatgccgcgctggacttcaagaacgtctccatcgtt
gcctgttatatttatgaacagacaaagaacgctcagttcatcatcatctccttgaggaac
aacatgtttgagatcgcggatcgtctcatcggcatctataaaacacacaacacaaccaaa
agtgtcggaatcaatcccaaaacaatcgtgttcagggaacacgatgccatcacggcataa
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