Xiphophorus maculatus (southern platyfish): 102236641
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Entry
102236641 CDS
T02923
Name
(RefSeq) PDZ domain-containing RING finger protein 4-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xma04121
]
102236641
Enzymes [BR:
xma01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102236641
Ubiquitin system [BR:
xma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
102236641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
102236641
NCBI-ProteinID:
XP_023205513
Ensembl:
ENSXMAG00000009342
UniProt:
A0A3B5PZR4
LinkDB
All DBs
Position
17:11456703..11496054
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AA seq
819 aa
AA seq
DB search
MGCNLCTLQKREEHYKLLYEIAQVNGRDFSKVEHDESVVEAIRRDPIVVQVLRRTPARAT
VVQKNCDSAQDVCVVDVCTQTDITFEHIMALAKLRPATPPVPDICPFLLSDSCQSIHTME
HDFYECPEYMSNTPGEVERPEEYEYEEVELCRLNREDKLGLTLCYRTDDEEDTGIYVSQV
EPNSIAARDGRIKEGDRILQINGFEVQDREKAVALLSSEEAKSIRLLVTRPEIQLEEEAV
WLDDEQQRLVEELKMEILEEKRKQREQSFEMADRLQGDEDVTTDTATCSSNNQDSGFGRS
TDSTEHQPLLARLYKRSPAKCLRDRWQSEHPLNRRGTVVPQDAQITKSHLTSQGNESVVS
IRNSGCGVRGLENCFQQLLELKCQIRNGGECGVYSIRHSIECSLTGQGGGDGDSDGDVGA
GAGVEQELKMLNEELRSIELECQSIMQAHQLRKSQQLEQSQSAPCSPGMNHKNGQKRHGR
LADIHEYPERSDSDRVREKDSSSAYNTAESARSTPLGMERSPDHSLQRQISITNQKNLRL
ASSVPSNPIPIPKPQGTHRPCRPADHGPVISSSPDQSNPSRSESDPALPADDERCDKKGR
SRDSRRALPYGASYQSGTYHGQGGSKQLQSYMQLLQQHSSLEYSQSQLSLLSVCRDPMHR
NGHGGEPRLEWKVKVRADGTRYVARRPARDRILRERALRIREERSGGMTTDDDAMSEMKM
GRYWSKEERKQHLARAREQRKRREFMQKSRLECLKEGPASGAEGKKEINILELSHKKMMK
KRNKKILDNWMTIQELMSHGARVPEGSTVHNAFLSVTTV
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcaatttgtgcaccttgcagaaacgagaggaacactacaaactgctctacgag
attgcacaggtgaacgggcgtgacttctccaaggttgaacatgacgaatcagtggtggag
gccatcaggcgagaccccatcgttgtccaggttctccggcgaacccccgccagagccacc
gttgtgcaaaagaactgcgactcagcacaggatgtgtgtgtggtcgacgtttgcacacaa
acagacatcacattcgagcacatcatggcgctggccaagctccggcccgcaaccccgcca
gtcccagacatctgtccgttcttgctctccgacagctgtcagtccatacacaccatggaa
cacgacttttatgaatgtccagagtacatgtccaatactccaggagaagtggaaaggcct
gaagagtacgagtacgaggaagtggagctgtgtcgtctgaacagagaggataagctcggt
ctgacattatgctaccggaccgacgacgaggaggacaccggtatttacgtcagtcaggtg
gagccgaacagcatagcagcgagagacggacgaattaaggaaggagaccgcattctgcag
ataaatggctttgaagtgcaagaccgggagaaagctgttgccttgttgtcaagcgaagaa
gcaaagagcatcagactcctggtgacaaggccagagatccagctggaagaggaggctgtg
tggctggatgacgagcaacagcggctcgtcgaggagctgaagatggagattctggaggag
aagaggaagcagagagaacagagctttgagatggcagataggctccaaggcgatgaggac
gtcacaacagacacggccacctgttcttccaacaatcaagacagtggatttgggcgcagc
acagacagtaccgagcaccagcccttattggcaagactttacaagaggagccccgcaaag
tgcctgagggatcgatggcagtcagaacatccactcaacaggcgagggactgttgtacca
caagacgcccaaatcacaaaatctcatttaacgagccaaggcaacgaaagtgtagtgagt
attcgtaatagtggatgcggagtccgaggtttagagaactgcttccagcaacttttagag
ctcaagtgccaaatacgaaatgggggcgaatgtggggtgtactccattagacacagtata
gaatgtagtctcactgggcaaggtggaggggatggagatagtgacggtgatgttggtgca
ggggcaggggtagagcaggagttgaagatgctgaatgaagagctgcgcagcattgagttg
gagtgccagagcatcatgcaagcccatcaactacgtaagtcccagcagctcgagcaatca
cagtctgcaccctgctcaccaggaatgaaccacaaaaatggacaaaagcggcacgggagg
ctggctgacattcatgagtaccccgagaggtctgacagcgatcgagttcgtgagaaggac
agctccagtgcctacaacacagcggagagtgcccggtcaacgcctctaggcatggagaga
tcccctgatcattcgctgcagagacaaatcagcattaccaaccagaaaaacctcagactt
gcctcttctgtgccatccaatcccattcctatcccaaagcctcaaggcacacataggccc
tgcaggccagccgatcacggtccagttatctccagcagccccgaccagagcaatccttca
cggtctgagtcggacccagccctaccagcggacgacgaaagatgcgacaaaaagggaagg
agcagagactcgagaagagctcttccttatggtgcttcatatcagtcgggcacctatcac
ggccagggaggatccaaacaacttcagagctatatgcagctgctccagcagcactcatcc
ctggagtattcacagagccagctgagtctccttagcgtgtgtcgagatcccatgcaccgc
aacggtcatgggggggaacctcgcctcgagtggaaagtcaaagtccgcgcagatgggact
cgctacgtcgccaggagacctgctcgcgaccgcatacttagggagcgggcacttagaatc
agagaagagaggagcggaggcatgaccacagacgacgatgcgatgagtgagatgaagatg
ggccgctactggagcaaggaggagaggaagcagcatttggcaagagccagggagcaaagg
aagaggagggagttcatgcagaaaagccgcctcgaatgcctaaaggagggaccggcgagc
ggagccgagggcaaaaaggagatcaacatcttggagctcagtcacaaaaagatgatgaag
aagcggaacaaaaaaattctggacaactggatgaccatccaagagctgatgagccatggg
gcaagagtcccagaggggtctactgttcataatgcctttctttctgtcaccactgtttaa
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