Xiphophorus maculatus (southern platyfish): 102236805
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Entry
102236805 CDS
T02923
Symbol
nipbl
Name
(RefSeq) nipped-B-like protein
KO
K06672
cohesin loading factor subunit SCC2
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
102236805 (nipbl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xma03036
]
102236805 (nipbl)
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
102236805 (nipbl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT
Cnd1
Cnd3
UBM
ARM_ECM29
Motif
Other DBs
NCBI-GeneID:
102236805
NCBI-ProteinID:
XP_023199296
Ensembl:
ENSXMAG00000016926
LinkDB
All DBs
Position
12:15848874..15875558
Genome browser
AA seq
2546 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNSRIAEEVNRLLGCRDEN
LASQLAHGLNQVSTEHIELKDNLGSDEPEGDAPLLLQTMLARNPGIFREKNVMQQPMVPP
FKITQNSMHSPAQSANFQPAAISPNPSSRFVGPQSGSSSRYIGQQNSPVPSPYTPQSPAP
GYIQQYPHQQPPSYNQHQQMSSVASPMVPGGIRNIQEGKVSGQLSNAPNHHSDRHGTDDY
MNIVQRLGNEEGDSAMRNPSFQLRSPQSGCSPTSSEGTPKPGSRPPLILQSPPPYASSPR
EGGHDQKQHLQQRKKTPTVKEEKDMYDIVSSPNKDSTKLTLKLSRVKSSESDPSGDAGPG
MDQNSDNIEAELGFQQVPVLQPNLAARLQQQQILQQTGGAGGLQPPSSPYDEAELDALAE
IERIEREAASEKCSKEVQDKDKPLKKRKQDSFPLEPGAGGPGAPTGAPGSGSTGGANAGK
LTPQEATAAGNGASRPPLMVSIDLQQAGRADGQLDPCLAAPIPALEAQRWPEEPASGPAA
VEGSDTALRLKPDGRPEVIKNRVDKHDSRREGRESSKHRHHEKSSDRRGELPKPSNRAEH
GRDRDRESDRDRRHRSETSSRDRRSPDSRSRSDRDRSGFQAAGEPGRSSGKQDGSKAASS
STGAKIPDSFPAQLLGGHTGALKNFQIPKINRDRENSGSTESQRWSQPKVKLERLGLVKD
FEKRPKPVVVLKKLSVDQIQRIIRHSKSGKNRFSGKSGKSGMDPEVLRELPPELLEEIES
TMPMYERVKMNKRKRSTVNERPKYAEVSSDEDYDANGESARKRHKREKDRAWEFEERERR
GSGDHRKSGNREGRRGSGSRYRDSSEEDSPPPSMSEIARKMKMKEKQKKRKAYEPKLTQE
ELMDSSTFKRFLASIDNILENLEDVDFTTMADDDEIPQELLLGKHQLNELGSESAKIKAM
SITSKIPSDKLVKLLNILEKNIQDGAKLSTLLNHDHDAESEERLWRDLIMERVTKSADAC
LTALNIMTSTHMPKAVYIEDVIERVLQYTKFHLQNTLYPQYDPVYRVDPHGGGMLSSKAK
RAKCSTHKQRVIVMLYNKVCDIVSNISELLEIQLLTDTTILQVSSMGITPFFVENVSELQ
LCAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDQDGEPMYIQMVT
ALVLQLIQCVVHLPSDKDVFEEYDKVDQDVLITNSYETAMRTAQNFLSVFLKKCGSKQGE
EDYRPLFENFVQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKQTEMALRVASLDYLGT
VAARLRKDAVTSRMDQRSIDRILQASPGTDETQQLQKALLDYMEENAETDPSLVFARKFY
IAQWFRDATTEAEKSMRNQNPKDEDSSDGPQHAKELETTGEIMQRAEKRKKFLRNIIKTT
PAHFATLKMNSDTVDYEDSCLIVRYLASMRPFAQSFDIYLTQILRVLGESAIAVRTKAMK
CLSEVVAVDPSILARSDMQRGVHGRLMDNSTSVREAAVELLGKFVLSRPQLTEQYYDMLI
ERILDTGISVRKRVIKILRDICLEQPTFSKITEMCVKMIRRVNDEEGIKKLVNETFQKLW
FTPTPAHDKETMTRKILNITDVVAACRDTGYDWFEQLLQNLLKSEEDASYKPAKKACVQL
VDNLVEHILKYEESLAENKGVNSTRLVACITTLYLFSKIRAQLMVKHAMTMQPYLTTKCN
TANDFMVICNVAKILELVVPLMEHPSETFLATIEEDLMKLIIKYGMTVVQHCVSCLGAVV
NKVTHNYKFVWSCFNKFYGALNKFKIQHQDDPNSTALVANKPFLLRSLFTVGALGRHFDF
DLEEFKGTNKIIIKEKVLELLLYFTKHEDEVVKTKAIIGLGFLVIMHPSQMFVPEVKSLY
NGILADASSSINLKIQVLKNLQTYLQEEDSRMQEADREWKKLSKQEDLKEMGDISSGMSS
SIMQLYLKQVLEAFFHTESSVRHFALNVIALTLNQGLIHPVQCVPYLIAMGTDPEPSMRN
KADQQLVEIDKKYTGFIHMKAVAGMKMSYSLQQAINSSRKSIVRGFRHDETHSALCSHLY
TMIRGNRQHRRAFLISLLNLFDDSAKTEVNMLLFIADNLACFPYQSQEEPLFIMHHIDIT
LSVSGSNLLQTFKELLLKEPRRKEKKVKVWKNTSDGEDEEGKMNCDFSRSDEEENCNSDE
NEDNDDEVVHRPKKSRRPIENSDSSESESDFEDLDVEDVEKVMRLLPDNPIGLLDFANAV
QGILLLLVLKQHLKNLYGFSDSKIQKYSPTESAKVYDKAVNRKNNVNFHPRQTLDFIFNN
MSNATLTEDVKRRIVKQYLDFKVLMEHLDPDEEDEEGEASASANIRNKAINALLGGSGPM
SGPSPRYQAGPETDDDDSDIDERTPGSSRRSRRAGDPSDPGRMSETVEAMDVIALCCPKY
KDRPQIARVTQKTPNGYTIHWMAGSYSGPWAEAKKRDGRKLVPWVDTIKESDIIYKKIAL
TSNHKLSNKVVQTLRSLYAAREGGAS
NT seq
7641 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgccccatgttcccatcaccactcttgctgggatcgctagcctcaca
gacttgttgaaccagctgccgcttccttcccctctacctgccaccaccactaagagcctc
ttgttcaattcgaggatagcagaggaagttaaccgtctactggggtgtcgggatgagaat
ctggcctcccaactagcccatggccttaaccaggtctccacagagcacatagaactgaag
gataacctgggtagcgatgagccagagggagacgcaccactgttgctgcagaccatgctg
gccaggaaccctggcatcttcagggagaaaaatgttatgcagcaaccaatggtaccacct
tttaagatcacccaaaactccatgcacagccctgcacagtctgcaaacttccaaccggct
gcaatttctcccaatccatcaagccggtttgtgggaccgcagtcgggttccagtagtcgg
tacataggtcagcagaacagtcccgtgcccagcccctacactcctcagagccctgcaccg
ggttacatacagcagtatccccatcaacaaccgcccagctacaaccaacaccaacaaatg
tcttcagtggcgagcccaatggtgccaggtgggatacggaatatccaagaaggcaaagta
tcagggcagctatctaatgctcccaatcaccattcagacaggcacggtacggacgactac
atgaatattgtgcagcggctgggaaatgaggaaggtgattcagccatgaggaatccttct
ttccagctgaggtctcctcagtcgggctgctctccaacgtcaagtgagggaacacccaaa
ccgggttctcgcccaccgctgattctccagtcgccgcctccctatgcgtcgtcgcccagg
gaaggcggacatgaccagaagcagcatcttcagcagaggaagaaaactcccacagtgaaa
gaggagaaagacatgtatgatattgttagctctcctaacaaggactcgaccaaactcacc
ctcaagctatccagggttaagtcaagtgaatccgatccatcaggtgatgctgggccaggc
atggatcagaactctgacaatattgaggcagagctgggttttcagcaagttccagttctt
cagcctaatttggcagccagactgcagcagcagcagatcctgcaacagactggtggagct
ggtggtcttcagccccccagttcaccttatgatgaggcggagcttgatgctctggctgaa
attgaaaggattgaacgggaggcagccagtgaaaagtgttcaaaagaagttcaagacaaa
gacaagccacttaagaagagaaaacaggactcatttcctcttgagcctggagcaggagga
ccaggggcccccactggtgccccggggagtggatccacaggaggggccaatgcaggcaaa
ctgaccccacaagaggccactgcagctggaaacggtgccagtcgccctcccctcatggtg
agcatcgacctccagcaggcagggagagctgacggccagctcgacccctgtctggctgcc
cctattcctgcccttgaagcccaacgctggcctgaagaaccagcaagcgggccggcagca
gtggaaggttctgacacagctttgcggttgaaacccgacgggcgaccggaggtcatcaaa
aacagagttgataagcacgacagcaggagagaaggtcgggagtcatccaagcaccgacac
cacgagaagtcgtcagatagacgcggagagttaccaaagccctcgaaccgagcggaacac
ggccgagaccgggaccgcgagtccgacagggataggaggcatcgaagcgagaccagcagt
agagacaggcggtcccctgattcccgttccaggagcgatcgagatcggtctggcttccag
gccgccggagagcccggtcggagcagcggtaaacaagacggatccaaagcggcctcttct
tccactggtgctaaaattccagattctttccctgctcagctccttggagggcataccgga
gcattgaagaacttccagatccccaagattaatcgtgatcgggagaacagcggatcaact
gaaagtcaaaggtggagccagcctaaggtgaaactagagaggctaggtttggtgaaggac
tttgagaagcgacccaagcctgtggtggtgttaaaaaagctctcagtcgaccagattcag
agaatcattcggcacagcaagtctgggaagaaccggttctcaggaaagtctgggaaaagt
ggtatggacccagaagttttaagggagcttcccccagaattactggaagaaattgagtca
accatgccaatgtatgaacgggtaaagatgaacaagaggaaacgcagtacagtaaacgag
aggcccaaatatgctgaagtcagctcagatgaagactatgatgcaaatggagagtcagca
aggaagcgtcacaaaagagagaaagacagagcctgggaatttgaagagagggaacgacgg
ggttccggagatcaccgaaagagcgggaaccgagaaggtcggcgaggctcaggtagccgc
taccgcgactcctccgaggaagattcgcctccacccagcatgagtgaaattgccagaaaa
atgaagatgaaagagaagcagaagaaacgaaaagcatacgaacctaagctaacccaagaa
gagctaatggactcatccacattcaagagattcttggcaagcattgacaacatactagaa
aatctggaggatgtggattttactaccatggcagatgatgatgagatacctcaggaactg
ttgcttggtaaacaccagctgaatgagcttggcagtgagtctgccaaaattaaggccatg
agcatcaccagcaagatcccatcagataaattggtgaagcttctgaatatccttgaaaag
aatatccaggatggagccaagctctctaccttgttaaaccatgaccacgatgctgaaagt
gaagaaaggctctggagagacttgataatggagagagtcacaaagtccgccgacgcctgt
ttgacagcacttaacatcatgacctcaacacacatgccaaaggctgtgtacatagaggat
gttattgagcgcgtgctacaatacaccaagtttcaccttcagaatacactttatccacag
tacgatcctgtctacagagtggacccacatggaggtgggatgttgagctccaaggcaaag
cgtgccaaatgctcaacacacaaacaacgtgtaattgtgatgttgtacaacaaagtttgt
gacatcgtcagcaacatttcagagcttctagaaatccagcttcttacggacacaaccatc
ctacaggtttcctctatgggaataactccattttttgtggagaatgttagtgagctgcag
ttgtgtgccattaagcttgtgacagcggttttctcacgttatgagaagcatcggcagctt
attttggaagagatctttacttctttggccaggttacccaccagcaagcgctccctgagg
aatttcaggctgaacagctcagaccaggatggagaaccgatgtacatccagatggtgacc
gctctggtgctgcaactgatccagtgtgtggtccatctccctagcgacaaggatgttttt
gaagagtacgacaaggtggatcaggacgtcctgataaccaactcgtatgagacagctatg
cggacagcgcaaaacttcctttcagtcttcctcaaaaaatgtggcagcaagcagggagaa
gaagactaccgaccgttatttgaaaactttgtccaggacctgctatcaactgtaaacaaa
ccagagtggcctgcagcagagctgttgctcagtcttcttggaagactgttggtacaccag
ttcagtaataagcagacagaaatggctctgagagtagcatctctggactacctaggcaca
gtggctgccagactcaggaaggacgctgtcactagcaggatggaccagagatctatcgat
cgcatcctacaagcgtctccagggactgatgagacgcagcagctgcagaaagctttactg
gactatatggaagaaaatgctgagactgatccttctctggtgtttgccagaaagttctac
attgcccagtggttccgtgacgccacaaccgaggctgagaagtccatgaggaaccagaat
ccaaaggatgaggactcatcagacggaccccagcatgcgaaggagttggaaacaactggt
gaaattatgcagcgcgcagagaaacgcaagaagttcctgcgtaacatcattaagacgaca
ccagcccattttgccacgctgaaaatgaattcagacactgtggactatgaagactcctgt
ctaatcgtgcgttatttggcctccatgaggccgtttgcccagagctttgatatttattta
acacagattttgcgagttcttggggaaagtgccatcgctgtaaggactaaagccatgaag
tgtttgtcggaggttgtggctgtagaccccagcattctggccaggtctgacatgcagcga
ggcgttcatggccgtttgatggataactccaccagtgtgagagaggcagctgtagagctg
ctgggcaagttcgtgctcagcagaccccaactcactgagcagtactatgatatgctcatt
gagaggatattggacaccggtatcagtgtaagaaagcgggtaatcaagattctcagagac
atctgtctggagcaaccaaccttcagtaagatcactgagatgtgtgtgaagatgatccgc
agggtcaacgatgaagaaggcatcaagaaactggtgaatgagacgttccagaagctgtgg
ttcactccaactccagcacatgacaaggaaaccatgaccagaaagattctcaacatcact
gatgttgttgctgcttgtagagacactggttatgactggtttgagcagcttctgcagaat
cttcttaaatctgaagaggatgcttcatataaaccagctaaaaaggcctgtgttcaacta
gtcgacaatctggttgagcacatccttaaatatgaagagtctctagcagaaaacaaagga
gtaaactcaacacggcttgtggcatgcatcaccaccttatacttgttcagcaagatcaga
gcgcagctcatggtcaaacatgccatgaccatgcaaccttatctgaccacaaagtgtaac
actgccaacgacttcatggttatctgcaatgtggcgaagatcttggagttagtggtcccc
ttaatggagcacccaagtgaaacttttcttgccaccattgaagaagaccttatgaagctc
atcatcaaatacggcatgacggtggtccagcactgtgtgagttgtctcggagctgtcgta
aacaaagttacacacaactacaagtttgtgtggtcttgctttaacaaattctatggtgca
cttaacaaattcaagattcagcatcaagatgatcccaacagcacagcattagtagcaaac
aagccttttctgctgcgatcgctcttcaccgtgggtgccctcggtcgacattttgatttc
gatctggaggagtttaagggcaccaacaagatcattatcaaggagaaggttcttgagctc
ttgctgtacttcaccaaacatgaggatgaggtggtcaagaccaaagccatcattgggtta
ggttttcttgttattatgcatccaagccagatgtttgtgcctgaggtgaaatccttgtac
aatggtatcctggccgacgcctcctcctccatcaacctcaaaatccaggtccttaaaaac
ctgcagacgtacctgcaagaagaagactcacggatgcaggaagcagaccgagaatggaag
aaactgtccaaacaggaggatctgaaagagatgggagacatttcatcagggatgagcagc
tccattatgcagctgtatctaaaacaggtgttggaggcgttctttcacacagagtccagt
gtgcggcactttgctctcaatgtcatagctcttacgctcaaccagggtctcattcatcct
gtacagtgtgtaccctacctcattgccatgggaacagacccagagcccagcatgagaaac
aaagccgaccagcagctggtggagattgacaagaaatacaccggtttcatccatatgaag
gcagttgcagggatgaagatgtcgtacagtttgcagcaggccatcaattcatctcgtaaa
agcattgtaagaggcttcaggcacgatgagacacactcagctctctgctcccacctctac
acgatgatccggggcaaccggcaacatcggagggccttcctcatctcactactgaacctc
tttgatgacagtgctaagacggaagtaaacatgctgctgtttatcgcagacaacttggct
tgtttcccataccagagccaagaggagccgctcttcattatgcaccacatagacatcaca
ctgtctgtttctggcagcaacttgttgcaaacctttaaagaacttctactaaaggagcca
agacggaaggaaaagaaagtaaaggtgtggaaaaacacgtctgatggtgaggatgaagag
ggaaagatgaactgcgatttttccagaagtgatgaagaggaaaactgcaacagtgacgaa
aacgaagacaacgacgacgaagtggtgcatcggccaaagaagtcaagaagacccattgaa
aactcagacagctccgaatctgaatccgacttcgaggatttggatgttgaggatgtggaa
aaagtaatgaggcttctgccagataatcccattggcctcttggacttcgccaatgcggtt
cagggcatcttgcttctcctcgtgctcaaacagcatttaaagaacctgtatggattttct
gacagtaaaatccagaagtactctccaacggagtcagctaaggtgtacgataaagcagtg
aacaggaaaaacaacgtgaacttccacccaagacaaaccttggacttcatcttcaacaac
atgagcaacgccacgctgacggaggatgtaaaaaggcggatagtcaaacagtatctggac
ttcaaggttctgatggaacacctggatccagatgaagaggacgaggaaggagaggcatct
gccagcgccaacatcagaaacaaagccataaacgccctgttgggaggctctgggcccatg
tcgggacccagcccccgctatcaagcgggaccagagacggatgacgatgatagtgatatt
gacgaaaggaccccagggtcctctcgaaggtcaaggcgagccggcgacccctcggatcca
ggccgaatgagtgaaacggtggaagctatggatgtgatcgccctctgttgccccaaatac
aaggaccgaccgcaaatagctcgagtcacccaaaagactcccaacggatacaccatccac
tggatggcaggctcttactcgggaccctgggcagaggccaagaaaagggacggccgtaaa
ctggtgccttgggtggacactattaaggagtcggacattatttacaaaaagattgccttg
accagcaaccacaaactgagcaacaaagttgtacagactttacgctcactatatgcagca
cgggagggaggggctagctaa
DBGET
integrated database retrieval system
