Xiphophorus maculatus (southern platyfish): 102236870
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Entry
102236870 CDS
T02923
Symbol
spg11
Name
(RefSeq) spatacsin
KO
K19026
spatacsin
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xma03400
]
102236870 (spg11)
DNA repair and recombination proteins [BR:
xma03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
102236870 (spg11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spatacsin_C
NLRX1_C
Motif
Other DBs
NCBI-GeneID:
102236870
NCBI-ProteinID:
XP_023204109
Ensembl:
ENSXMAG00000005107
UniProt:
M3ZSF2
LinkDB
All DBs
Position
2:25947662..25975678
Genome browser
AA seq
2399 aa
AA seq
DB search
MFDGQNSIEVLVIPENQRCGQLADIQKAALCPAGSLLCCLGVSGQLLVWDPGDRGAPPAA
SDGCFVDFCWEEANTSIWGVSSCNLLAVGSQGDITLFEAEAEQSTPVSLLTVQKCNVDNL
LEIVKGSDKSVCELVPVQVLSFMANQCCVLVNNEWILQLQWEQASQEPKTTSCCRIQLTT
SDRHTAVHHCVCAETLFVLSSSGLIYVYAITDGSLLASINIPSYLSSGWPDGGLTSSSLS
SSSSSSSSFCLFQVSADLCTAVAVTQSHAAVALNLNHYFREHPEHLHCVGPQSSSSLQPK
DPGDQDALSSSSLAAVGSPLSDNRAWDTCLASMYARAQQAAYPSSPSKSGGVPWFHSLPH
LQSHPAAMSSHSRVPPSGATVAFSVLDSSIPSLLAVSEFSALLTFVAPGNTHTTVALWDM
ESGRTSYHQAEGTAVPVQHSGERQHRLLLKRSGVFQVLFSMSQEDLLSRLMLFGSAATVD
TVCHLNSWGHCSIPFHALQAGLKNRQLDTVDLYLKSKENVLNPSAAAGFSEQLAESKLSL
KDSVQELLPALDLLCSAVRELNSEAQSRQFSEQLLNLTMSFINTQIRSVLLWPRYEQSDV
QSNVEVLGKYVTELRGYMKRFPWASGDSTSDTSATLQGAKTDDWEQLSTQEVIHQSILTN
QIPRAQAVMWRQSRPEKQLSALRMVGLRQVLSCLQCKDLKSAKKFLTNMGFSVKKELHSI
CLYTNNKDLRELLVEDLSKQSSLTEEELEGVSFICEIEKLGLLPAVFCPANPLSQRLPQM
VHKELDGEEVLKESVGQSSEEEEGELWRNLRLDWVKTWDQSCRTAVRLSRLQHIELSCCD
PAVLWHYLTAFHHHQKVVDWIHNQRTFGSPCWPDITPEMVNNNTVCSIFFKENILDLLAG
KGVFIPDEMSDLEQLLWRLAQGAGLMTSSPPVSQYCSPVGLNLHSVFIALCLEHNLQYLL
YTYLEHYRLTPRNCPLLTDQNLLGSQPWFEMMVKTQEITRDLSEPEPVFQASLTSAQVLL
PGSQASLSSLLFEGHSLLALASIMFAHGGIDKVVAQGQSSTGLEGTVDPQLLKMALAPHY
KLRAALFPSGNGSSTDISIYHLLQSLHPLDPSRLFSWQTANPLNCTETSELPHFSSSHLV
DKFAIVENLDFLYYIHHGRPSFAYGNFLIQQLGVCSDVQLLLQTVWLQVYRLALKCFNKP
SVTSSAVCFCELLGICSLKLRVDIRAMNTILQHWNQLDRHTPTQNLRALMSKAVKLVNGE
PGAAAELLCYLEAAVADSLEQRGVSRSSFEAAQEWALPVQFCQLHSLELSLVYPSHCAED
RQFVHFLLFVQLHSFPPQQVRSLVGLFDPVLQAHLSLAFQDLQVHSQRRSRDPEERLGFL
RTDVAPGGSEHGGELFQLLLQSQEKQVSWRFLLHEAIVRHCPMLAVLAACLQGADLLSCL
CVWMLTSVVDATTEEATSHLAEAPQDHEWTLHDLSIIWKTLLSQGHIRVLLRGFELFQQD
CPLVLVLRMFELCCDHRKFAEAKTKLLDFQRTLITLRNGGPAAAGSLPLQWVESQASALL
LTMLLRCSSQYDLHQLLQLLADVDKLLKSNGPDLRKLSQLSQLLQGSGVTLSQSLLQCIP
PSVQQEEFQLIVDALQTGGHYSQARQVAVLAGLPVHRLLMSQLLQEVNVHKSKWRWRRLE
TRVAFWNKCHRRLEADSTDPESAAQFFLSQSEAAAGPDGDQAQTNVLDIQECCLLLQLTA
HWLSLQTPVPVDELQRLEKKLWFCQVQKHILTTTVEEKSMFNLLPPAITSETNEYETFMK
EFSFSNIADLNMEKYLSLEGFPEKPEELEAESDLSSEERRVLAILIDQLLDKGSIHEASR
VCRYFSMHSPDVWLVLCCHALACGFLVPEPQEQTSEPAETKALTQSPSLSSLSSFVMVPL
HEDAVTVQIQKRVEQCRHGSSYCKQVLSLYQLSKELQCPFSHISREEPHSVLEKLLLLVQ
PDRFRMAKTFIKTQGLSADSVAELVSNAVVQGLLAATQELQPGERLIFRPSEGQESLLQL
IRLCEDPNIVGLKLLENLNTVPLRDLSSIVELLIVAHSCFSLTCNMEGIVRVLQAARHLS
HTYLAPGEHYSLLVRLLTGIGRYNEMTYIFDLLHQNHCFEMLLRKKVDRDIGQSSSLKTS
LLDYIKRCLPADSEKHNMVALCFSMRREIGENHEIAARTQLKMIESQDWVVTPDLKNSLV
KVLGLLKDAAESFSKDSCVHQAGRCVRAAKLITLQLHLLNQGSTLRIINLKPAEMHSAIM
ALPQCYQVFVVAEAYSYSPDWAEILYQKVVLKGHFVYLEELKCHRPLTSALFEDIFRKLD
SVPSSVCSNAKRLLSHCDDVYTRYRLAYQQNLYDVTKTLLQDNKTSCYMNDRLASKAFI
NT seq
7200 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacgggcagaactcgatagaggtgctggttattcctgagaaccagcgctgtggt
cagcttgcagacatccagaaagccgcgctgtgccctgcgggctccctgctctgctgcctt
ggcgtctcgggccagctgttggtgtgggaccctggggacagaggggcccctccggctgca
tcggacggctgctttgtagatttctgctgggaggaggcgaatacaagcatttggggagtc
agcagctgtaatttgttggctgttggatcacagggtgacataacgctattcgaggctgaa
gcagaacaatccaccccagtttctttgctgactgtgcaaaagtgtaatgtagataatctg
ctggaaattgtcaaggggagcgacaaaagtgtgtgtgagctggtgcctgtacaggtgttg
tcctttatggccaaccagtgctgtgtactggtaaacaatgagtggattctgcagctgcag
tgggaacaggcatcacaagaaccaaagacgacctcctgctgcagaatccagctaacaacc
agtgacagacatactgctgttcaccactgtgtctgtgcagaaaccctatttgtcctcagc
tccagtggactcatatatgtgtatgccattactgatggttctctgctggccagcatcaac
attccttcctacctgagctctggttggccggatggcggcctgacttcctcttcactctcc
tcctcctcttcctcctcctcctccttctgccttttccaggtgtcagcagatctttgcaca
gctgtagctgtaactcagtctcatgcagcagtcgcccttaatcttaaccactacttcaga
gaacacccagaacacctccactgtgttggcccccagtcctcttcctcacttcagcccaag
gatccaggagaccaggacgccctgtccagctccagtcttgctgctgttggttcaccactc
agtgataaccgtgcctgggacacttgtctagcatccatgtatgccagagcgcagcaggcg
gcttatccctcatccccctctaagtcaggaggggttccatggttccactcgctcccccac
ctgcagtcccacccagctgccatgtcctcccacagcagagtgcctcccagtggggcgacc
gtggccttctctgtccttgactcatccattccatctcttcttgccgtttctgagttctct
gcacttttgacctttgttgctcctggcaacacacacacaacggtggcattatgggatatg
gagtctgggagaacgagctaccaccaggctgaaggaacggctgtgccagtgcagcacagt
ggagagagacagcacagactgctgctgaagaggtccggtgtgttccaggtcttgttttcc
atgtcccaggaggatttattaagcaggttgatgttgtttggcagtgcagcaacagtggac
acagtctgtcaccttaacagctgggggcactgctccattcccttccacgcgctgcaggct
ggactgaaaaaccgacagcttgacacagtggatttgtacctgaaaagtaaagaaaatgtc
ctgaacccatcagcagcagctggtttttctgagcagttagcagaatccaaactgagtctc
aaggacagtgtccaggagttgttgcctgcgttggatttgttgtgttcggcggtcagagag
ctgaacagtgaagctcagagccgacagttctctgagcagctgctcaacctcaccatgagc
ttcattaacacacagatccgctctgtgctcctctggccacgttatgagcagtcagacgtg
cagagcaatgttgaagttctgggcaagtatgtcacagagttgaggggttatatgaagaga
ttcccctgggcttcaggcgactccacatctgatactagtgctactctccagggagcaaag
actgatgactgggagcaactttcaacgcaggaagttatccatcagtcgatcctgaccaat
cagatcccccgagctcaggccgtaatgtggagacagagccggcctgaaaagcagctgtca
gctctgaggatggtgggcctgcgccaagttttgtcctgcttgcagtgcaaggacctaaag
tctgccaagaaattcctgaccaacatgggtttcagtgtgaagaaagagcttcacagcatc
tgcctttacaccaacaacaaagatctccgggaattgttggtagaggatctgtcaaagcag
agttctctgactgaagaagagctggagggcgtctcgttcatctgtgagatagagaagctt
ggcctgctgcctgcagtcttctgcccagctaatcccctttcacaacggttacctcagatg
gttcataaggagctagatggtgaagaagtgctgaaggagtcggtgggacagagttctgag
gaggaggagggagaactctggaggaacctccgactggactgggtgaagacctgggatcag
agctgccggacggctgttcgcttatccaggctgcagcacatagagctgagctgctgtgac
cctgcagtgttgtggcactacctgactgcttttcaccaccatcagaaggtggttgactgg
attcacaatcaaaggacctttggctccccctgttggccggacataactcctgagatggtc
aacaataacacagtgtgcagcatcttcttcaaggagaacatcttggaccttctagctggg
aaaggtgtatttatcccagatgagatgtcagacttggagcagctgctatggcgactggct
cagggtgctgggttgatgacgtcatccccccccgtatctcagtattgctcccctgttggc
cttaacctacacagtgtcttcattgcattgtgcctggagcataatcttcagtacctgctt
tatacctacctggagcactacagactgacgcccagaaactgccccctccttaccgatcag
aacctgctggggagtcagccctggtttgagatgatggtgaagacccaggagataaccaga
gacctgtcagaaccagaacccgtgttccaggcgagtctgaccagcgctcaggtgctgcta
cccggtagccaggcctctctgagcagcttactgtttgagggacacagtctgctggcgctg
gcttccatcatgtttgctcatggtggaattgataaggtggtggctcagggacagagttca
acaggtttggaggggactgttgacccccagctcctgaagatggcactggcccctcattac
aagctgagagccgccctcttcccatctgggaatggctcatccactgacatctctatttat
caccttctccagtcgcttcaccctcttgacccatccaggctctttagttggcagactgca
aaccctctgaactgcactgaaacatccgaactgcctcatttttctagctctcacctggtt
gataagttcgctatagtagaaaacctggactttctttactacatccatcatggtcgacca
tcttttgcatatggaaactttctcatccagcagctgggggtctgcagtgatgtgcagttg
ctgctccagacggtctggctgcaggtgtacagattggctctgaagtgtttcaacaagccg
tctgtgacatcgtctgctgtgtgtttctgtgagctgctgggaatctgcagcctgaagctg
agagtcgacatcagagccatgaacaccatccttcagcactggaaccaactggacaggcac
acaccaacgcagaatctgcgagcattaatgtctaaagcagtaaagctggtgaatggagag
ccgggagctgcagcagagctgctttgttacctggaggctgcagtggcagacagtctggag
cagaggggggtcagcaggtcgtcgttcgaggcggctcaggagtgggccttacccgttcag
ttctgtcagctccacagtctggagctcagtctggtttatcccagccactgtgccgaggac
agacaatttgtacactttttattgtttgtccaactgcacagtttcccaccccagcaggtg
aggtccctggtaggtctctttgaccccgtcttgcaggctcacctaagccttgcatttcaa
gacctgcaggttcacagtcagagaaggagccgagaccctgaggaacggctgggctttctg
agaactgatgtggcccctgggggctccgaacacggcggggagctgttccagctgctgctg
cagagccaggagaagcaagtgtcatggaggtttctcctacatgaggcaatagttcgacac
tgcccgatgctggcagtacttgctgcctgtctgcagggagcagatctgctgtcatgtctg
tgtgtgtggatgctgacctctgtcgttgacgcaacaacagaagaggccacttcacacctc
gccgaagccccccaggaccatgaatggaccctccatgacctgtcaatcatctggaagacg
ctgctgtcgcagggtcacatccgagtcctcctgcgaggatttgagctttttcagcaggac
tgccccctggtgttggttctgagaatgttcgagttgtgttgcgatcacagaaaattcgct
gaggccaagacgaagttgttggactttcagaggacacttattactctcagaaacggtggc
cctgccgctgcaggcagccttccactgcagtgggtggagagccaggcctcagcgctgctc
ctcaccatgctgctgcgctgctcctcccaatacgaccttcaccagctgctgcagctcctg
gctgatgtggacaaacttctcaaatccaacggtccagacttaaggaaattgagccagctg
agtcagctgctgcaaggatcaggtgtgactctgtcccagagcctgctgcagtgcattccc
ccctccgtccagcaggaggagtttcagctgatagtggatgctttgcaaactggaggacac
tacagccaggccagacaggtggcagtgctggctggtctgcctgtccaccgcctcctcatg
agccagctgcttcaggaagtaaacgtccacaagagcaagtggcggtggagacgtttggag
acccgagtggccttctggaacaagtgccacaggcgactggaagctgacagcactgaccca
gagtcggccgcgcagttctttctatctcagtcggaggctgccgccggccctgatggtgac
caggctcagacaaatgttctggacatccaggagtgctgcttgctgctccagctcacggcc
cactggctttccttgcaaactcctgttcctgtagatgagctacagaggctagagaaaaag
ctgtggttctgtcaggtccagaagcacattctcacaactacagtagaggaaaagagcatg
ttcaacctgctgccaccggcaatcacgtctgaaaccaacgaatatgagacgttcatgaag
gagttttcgttctccaacatcgcagacctgaatatggagaagtacctgagtctggaggga
ttcccagaaaagcctgaggagttggaggcagaatcagatttaagttctgaagagagaaga
gttttggcaatacttattgaccagttactagataagggtagtatacatgaagccagtcgt
gtttgccgctatttcagcatgcacagtccagatgtatggttggttctgtgctgccatgct
ctggcatgtggattcttggtaccggaaccacaagagcagacctcagaacccgcagaaacg
aaggctctaacccagtccccctctctcagcagtctgtcctcatttgtgatggtgcccctc
cacgaagacgccgtcactgtccagatccagaagcgggtggagcagtgtcgccatggaagc
agctactgcaaacaagtcctcagtctctaccagctctccaaggaactgcagtgccccttc
agtcatatcagcagagaggagcctcattctgtgttagagaagctgctgctgttggtgcaa
ccagatcggttcaggatggccaagaccttcatcaaaactcagggtcttagtgctgacagt
gtggctgagttggtctccaacgctgtggttcaaggcctgctggcggcaacccaggagctg
cagcctggagaaaggctgattttcagaccatcagaggggcaggagtcactgctgcaactg
atcagactgtgtgaagatccaaacatagtgggcctcaaactgctggaaaaccttaacact
gttccactgagggacctgagctccattgtggagctgctgattgtggctcacagctgtttc
agtctcacttgcaacatggagggaattgttcgagttctccaagctgctcgtcatctcagc
cacacctacctggctccaggagagcactacagcctgctggtgcgtctgctgacgggtatc
ggcaggtacaatgagatgacgtacatcttcgatttgctccatcagaaccattgttttgag
atgctactgagaaagaaggtggacagagacataggacagagctccagtttgaagacttct
ctgctggattacatcaaacgctgcctccctgctgacagtgagaagcacaacatggtggcg
ctgtgtttcagcatgagaagggaaattggagaaaaccatgaaatagccgccaggacacag
ctgaagatgattgaatctcaggactgggttgtgactcctgatcttaagaactcattggtc
aaggtattgggtctgctaaaggatgctgcagaaagtttctccaaggactcctgtgtgcat
caggctggtcgttgtgtccgtgcagccaaactgatcactcttcagctccacttgttgaac
cagggatccaccctacgcatcatcaacctaaagcctgcagagatgcacagtgccatcatg
gctctgccacagtgttaccaggtgtttgttgtcgcagaagcgtacagctacagtccagac
tgggctgagatcttgtatcagaaagtggttctgaagggacactttgtttacctcgaggag
ctgaaatgccaccgtcctctcacctccgccctatttgaagacattttcagaaagctggac
agtgtccccagcagcgtctgttccaacgcgaagcgtctgctcagtcactgtgatgatgtg
tacacccgctacagactggcctaccagcagaatctctatgatgtcaccaaaacactgctg
caagataacaagacctcctgctacatgaatgacagacttgccagtaaagcatttatctga
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integrated database retrieval system
