Xiphophorus maculatus (southern platyfish): 102236929
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Entry
102236929 CDS
T02923
Symbol
dcaf13
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xma03009
]
102236929 (dcaf13)
04121 Ubiquitin system [BR:
xma04121
]
102236929 (dcaf13)
Ribosome biogenesis [BR:
xma03009
]
Eukaryotic type
90S particles
Other 90S particles
102236929 (dcaf13)
Ubiquitin system [BR:
xma04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
102236929 (dcaf13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sof1
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
eIF2A
ANAPC4_WD40
KNTC1_N
WDR90_beta-prop_4th
Beta-prop_NUP159_NUP214
Beta-prop_WDR35_TULP_N
NBCH_WD40
Beta-prop_WDR19_1st
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
102236929
NCBI-ProteinID:
XP_005807556
Ensembl:
ENSXMAG00000003998
UniProt:
A0A3B5QDQ3
LinkDB
All DBs
Position
3:27895931..27907043
Genome browser
AA seq
445 aa
AA seq
DB search
MKVKVLSRNPDDYVRETKHDIQRVPRNYDPSLHPFEVSREYTRALNATKLERVFAKPFLA
SLDGHRDGVNCLAKHPRSLSTLLSGSCDGEVKVWNLTKHECVRTLQAHEGFVRGMVVRYC
GSSFFTIGDDKTIKHWKMEAPGYGEEEEPLNTILGKAVFTGLDHHQKSAVFATCGHQVDI
WDEQRSTPIRSFTWGVDSFSSVRFNPVETELLGSCASDRSIVLYDMRESTPLKKVIMTMR
TNTISWNPMEAYYFTCANEDYNLYTYDMRYLENPVKVHVDHVSAVLDVDYSPTGREFVSA
SFDKTIRIFPKDSASSREVYHTKRMQHVICVKWSADSKYILSGSDEMNIRLWKANAAEKL
GVLSPREKQAIHYSQKLKEKFQHHPQIKRIARHRHLPKVIHHQRKELRVMKEARRRKEMN
VRKHSKPGSVPVVSEKEKHVVSVVK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcaaggtcctttcaagaaacccggatgattatgtccgggaaactaaacacgat
attcagcgagtccccaggaactacgacccctcccttcatccgttcgaggtgagcagagag
tacacccgggctctgaacgccacgaagttggagcgcgtgtttgccaagccttttctggcc
tccctggacggacacagagacggggtgaactgtctggccaagcacccccggagtctctcc
accctgctgtctggctcctgcgatggcgaggtcaaagtgtggaatcttaccaaacacgag
tgcgtccgcactctccaggcgcatgaagggtttgtccggggaatggtcgtcagatactgc
ggttcttccttctttacgatcggagatgacaaaaccatcaaacattggaaaatggaagcg
ccgggctacggagaggaggaggagcctcttaacaccatcctcggcaaggccgtgttcaca
ggactggaccatcaccagaagagcgctgtgtttgcaacatgcggccaccaggtggacatc
tgggacgagcaaaggagcacccccatccgctccttcacctggggcgtggacagcttcagc
tccgtccgttttaaccctgtggagacggagctccttggaagctgtgcctctgacagaagt
atagttttatatgacatgagggaatcaacacctcttaaaaaggttatcatgacaatgagg
accaacacgatcagctggaacccaatggaagcttactacttcacttgtgcaaatgaagac
tacaacctgtacacatacgacatgaggtatctggagaatcccgtcaaagtgcacgtggac
cacgtctccgccgtgctggatgtcgactactctcccaccggacgggagttcgtctccgcc
agctttgacaagaccatccgcatcttccccaaagactcggcaagcagcagagaagtctac
cacaccaagcgcatgcagcacgtcatctgcgtaaagtggtcggcggacagcaagtacatc
ctgagcggctcggacgaaatgaacatccggctgtggaaggcgaacgcggcggagaaactg
ggagtgctgtctcccagagagaagcaggccattcactacagccagaagctgaaggagaag
ttccagcaccacccacaaatcaagcgcatcgctcgccaccgacacctgcccaaggtcatc
caccaccagaggaaggagctgagggtcatgaaggaggcccgcaggcgaaaggagatgaac
gtccgtaagcacagcaaaccaggaagcgtgcctgtggtgtctgagaaggagaaacatgtc
gtcagtgtggtgaaatag
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