Xiphophorus maculatus (southern platyfish): 102236933
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Entry
102236933 CDS
T02923
Symbol
tsen34
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xma03016
]
102236933 (tsen34)
Enzymes [BR:
xma01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
102236933 (tsen34)
Transfer RNA biogenesis [BR:
xma03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
102236933 (tsen34)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
Motif
Other DBs
NCBI-GeneID:
102236933
NCBI-ProteinID:
XP_023207747
Ensembl:
ENSXMAG00000014006
UniProt:
A0A3B5RAD4
LinkDB
All DBs
Position
18:1865888..1868378
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AA seq
286 aa
AA seq
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MEAELQPQEERSPAPVVGLSLCDSAPLLWRLQDLKAVRSEGLVGALLGSLPRTPRQNVRL
GRPLLLLPEEERLLGERGGAAALPAQNQEAAAGELQQRYTEEQQRSFEEQSVLALEDRES
ALVRAMTSSSGSDPASDEALQHRLLDLEQNFSFPRSALAVQLSTARAGLSHCPEARAFLE
ADWPIRAQRCPRREARFQVFRDLRGRGFFLTSAGKFGGDFLVYPGDPLRFHAHFIAICLA
LDESVCLLDVLCAARLGSNVKKTVLLCSPAPDGPVRYTSLQWSGMV
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggagctgcagcctcaggaggaacggagccccgcccccgtcgtcgggctgagt
ctctgtgactccgccccgctcctgtggcggctccaggacctgaaggccgtgaggtccgag
ggcctggtgggggcgctgctcgggtcgctgcccagaaccccccggcagaacgtccgactg
ggccggccgctgctgctgctgccggaggaggagagactgctgggagaacggggcggcgcc
gccgctctgcccgcccagaaccaggaagcggcggccggggagctgcagcagcgttacacg
gaggagcagcagaggagcttcgaggagcagagcgtcctcgctctggaggacagggagtcg
gcgttggttcgagccatgacatcatcatcaggttctgatccagcctcagacgaggccctg
cagcaccgcctgctggacctggagcagaacttcagctttcctcgctcggcgctggcggtg
cagctgagcacggcgagggcggggcttagccactgtccggaggcccgcgccttcctggag
gccgactggccaatcagagcgcagcgctgcccccgcagggaggccaggttccaggtgttc
agggacctgcgggggcggggcttcttcctgacgtctgcagggaagttcggcggagacttc
ctggtgtatccaggtgacccgctgcgtttccacgcccacttcatcgccatctgcctggcg
ctggacgagtccgtctgcctgctggacgtcctctgtgcggcccggctcggctccaacgtc
aagaagacggttctgctgtgttcgccggcgccggacggcccggtccgctacacctcgctg
cagtggagcgggatggtgtga
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integrated database retrieval system
