Xiphophorus maculatus (southern platyfish): 102236995
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Entry
102236995 CDS
T02923
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K03145
transcription elongation factor S-II
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xma03021
]
102236995
Transcription machinery [BR:
xma03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
102236995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
HVO_0758
EAD11
Motif
Other DBs
NCBI-GeneID:
102236995
NCBI-ProteinID:
XP_023186508
UniProt:
A0A3B5QR96
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Position
3:complement(19927516..19938281)
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AA seq
714 aa
AA seq
DB search
MTREEDLIRIAKKLDKMVSRNNTDGAIDLLKELKSFNMTLKLLQETRIGMSVNNIRKHCR
DEEVIALAKVLIKEWKRLLDSGNSHSEKVDELKNGLDARKPAAATNSCSSEPQSSHRRLE
AKPKHESDSDKNRNEKQNDNHINKKSHADDPGTDGKHLEGHQSEKYLQEIRAEKQTPAEN
PKPETDHKKQRHAPDLQSGKHKSDPIKHRSLEDLKKMRNAELLKKEKPPEEPKKYTDDGN
QDKSRAEGRHEWPVGTPQRGKPAEAHKLIFERRGVLDSSVLYPTRFPSPPRPARPLLPIK
RPSLDSKKDRKDGKESSSRHPHSQPASPPPKRPAAEIKKERKVPPDPNAPIAPLPFHLHP
PPQRKEPPDPNAPLPPLPLHLHPPAAPPKRTSVDGGKDRESSRKPSSDSKPLPQKKPADC
VKKDRKDSDDGKASKKLSEDTKRERKDSSDSKPPSTKKPTIEVKKEKHRKDSSELKPSQP
AKGHSTDSKSVRRESLGSKPLGQPQRKPSTDSLDRKGKTEAPRTPTTPTSPLSPSFSSPG
GPLSPHLATGDSVRDKCIEMLTAALRTDNDYKDFGANCDGMAAEIEDHIYQEIRATDMKY
KNRVRSRISNLKDPKNPGLRRNVLAGSIELSRIASMSAEEMASDELKQLRNVLTQEAIRE
HQMAKTGGTTTDLLQCGKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKFC
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgactcgagaggaggacctgatccggatcgccaaaaagctagacaagatggtgtctaga
aataacacggacggagccatcgacctgctgaaggagttgaaaagcttcaatatgacactg
aagcttctccaggaaacaagaattggcatgtctgtgaacaacatcaggaagcactgcaga
gacgaagaagtcatcgctttggcaaaagtcctcattaaagaatggaagagacttcttgac
tctggaaattctcactctgagaaagttgatgaactgaagaacggtttggatgccaggaaa
cctgcagcagctacaaacagctgctcctcagagccacagagcagtcacaggaggctggag
gccaaaccgaaacatgaatccgattctgacaaaaacaggaatgaaaaacagaacgataac
cacataaataaaaagagccatgcggacgatcccgggacggatggaaaacaccttgaaggg
caccaaagtgagaaataccttcaagaaatcagagcagagaaacaaacccctgcagagaat
cccaaaccggaaacggatcataagaaacagaggcacgcaccagacctgcagagtggaaaa
cacaagtcggacccaatcaagcacagatcgctggaggatttgaagaagatgagaaacgct
gagctactaaagaaagagaaacctcccgaggagcctaagaaatacacagatgatgggaat
caggataaaagcagagcggaaggcagacacgagtggcctgtcggcacacctcagagaggg
aagccagctgaagctcataagctaatctttgaaaggagaggagtgctggacagcagcgta
ctgtatcccacccgcttcccctccccccctagacctgctcggcctcttctacccatcaaa
cgtccatctctggactcgaaaaaagacaggaaggacggtaaagagtcttcctctcgacac
cctcactctcaaccagcctctccgccgccaaagcgacctgcagcggaaatcaagaaagag
aggaaagttccaccggacccaaatgctccgatagctcctcttcctttccacctccatcct
cctccacagagaaaagagcctcctgatcccaacgcgcccctccctccgctcccactccat
ctccacccccccgctgctcctccgaagcgcacctctgtggatgggggcaaggacagagag
agcagcaggaagccatcctcagactcaaagcctctgccgcagaaaaagcctgcagattgc
gtaaagaaagacaggaaagattcagatgatggcaaagcgtctaagaaactgtcagaggac
accaagagagaaaggaaagattcttctgactctaaaccaccctctaccaaaaagcccacc
atcgaggtcaaaaaagaaaagcacaggaaggattccagtgaactgaagccaagccaacct
gcaaaaggccattccaccgactccaaatccgtcaggagagagtctttaggctcgaagcct
cttggacaaccacagaggaaaccgtctactgacagcctggacagaaagggtaaaaccgaa
gcacccagaactcccaccaccccgaccagtcctctgtcacccagcttcagctctcctggg
ggtcctctgtcccctcacctggctactggagactccgtcagagacaagtgcattgagatg
cttacagctgccctgcgaacagacaatgactacaaagattttggagcaaactgtgacggt
atggcagcagagattgaggatcatatctaccaggagatcagggccacagatatgaagtac
aagaaccgagtccggagccgcatcagcaacctgaaggaccccaagaacccgggactccgc
agaaacgtcctggccggcagcattgagttgagccgcatcgccagcatgtctgctgaggaa
atggccagtgatgagctgaaacagctgaggaatgtcctaacccaggaggccatcagggag
caccagatggccaaaaccggtgggaccaccacagacctgctgcagtgcggcaaatgcaag
aagaagaactgcacctacaatcaggtgcagacccgcagtgctgatgagccgatgaccaca
tttgtcctctgcaatgagtgtggcaaccgctggaagttctgctga
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