Xiphophorus maculatus (southern platyfish): 102237099
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Entry
102237099 CDS
T02923
Symbol
cacna1s
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1S
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04010
MAPK signaling pathway
xma04020
Calcium signaling pathway
xma04260
Cardiac muscle contraction
xma04261
Adrenergic signaling in cardiomyocytes
xma04270
Vascular smooth muscle contraction
xma04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102237099 (cacna1s)
04020 Calcium signaling pathway
102237099 (cacna1s)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
102237099 (cacna1s)
09153 Circulatory system
04260 Cardiac muscle contraction
102237099 (cacna1s)
04261 Adrenergic signaling in cardiomyocytes
102237099 (cacna1s)
04270 Vascular smooth muscle contraction
102237099 (cacna1s)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xma04040
]
102237099 (cacna1s)
Ion channels [BR:
xma04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
102237099 (cacna1s)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
CAC1F_C
LYRIC
Motif
Other DBs
NCBI-GeneID:
102237099
NCBI-ProteinID:
XP_005801476
Ensembl:
ENSXMAG00000010988
LinkDB
All DBs
Position
1:complement(14987777..15011917)
Genome browser
AA seq
1849 aa
AA seq
DB search
MATNADAAKPVIMNEEELKKKQREKLKRLQATGGNPRPARTLFLFSLKNPFRKACINIVE
WKTFEIIILLTIFANCVALAVFLPMPEEDSNNTNENLESLEYIFLIIFTFECFMKIIAYG
LVFHEGAYLRNCWNILDFVIVFMGLFTFCLDTINMIAGVEKEKGGGFDMKALRAFRVLRP
LRLVSGVPSLQVVMNSILKAMLPLLHIALLVFLLVTIYAIMGLELFKCKMHKTCYYTGTN
IYATAEGELPAPCAQAGNGRRCTINSSECRPNWEGPNNGITHFDNIGFAMLTVYQCITME
GWTKVLYWVNDAIGNEWPWLYFVPLILLGSFFVLNLVLGVLSGEFTKEREKARSRGEYQK
LRERQQLDEDLHGYMEWITHAEVLDADREGKGLLPLTSGDSDTDSLYDLEGKSRIIYYYR
LGLRWNRFFRMKCLIYVKTKSFYWAVMFLVFLNTLTIATEYHRQPDSLTSLQDVASRILL
VLFVFEMLVKMYALGPRAYFMSLFNRFDFFVVLCGILEMIMLSVGAVAPLGFSVLRCIRL
LRIFKVTKYWTSLSNLVASLLNSVRSIASLLLLLFLFIVIFSLLGMQVFGGKFNFDYNRP
RRSNFDNFPQALISVFQILTGEEWTNIMYNGIMAYGGPEIPGILVSIYFIILFVCGNYIL
LNVFLAIAVDNLAEAESLTSAQKEKAEEKMRKKLLRSKMPEKTDEERERIAKKLAEQRAK
MEGMPTTAKLKIDEFESNVNEVKDPFPPADFPGDDEEEEPEIPISPRPRPMADLQLKEEA
VPLPEASSFFIFGPQNKFRKLCYKIINASSFTNLILLFILLSSISLAAEDPIDPKSYRNQ
ILAYADIVFTTVFTIEIVLKMTVYGAFMHEGSFCRNSFNILDLIVVTVSLLSMGMESSAI
SVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIKTIGNIVLVTMLLNFMFACIGVQLF
KGKFYSCTDPTKVTAEECKGYYLKHMENSLQDTVLAKRQWINSDFNFDNVLNGMLALFTV
STFEGWPKLLYRAIDSAEEDMGPVYNNRVDVSIFFIIYIILIAFFMMNIFVGFVIVTFQE
QGEQEYKNCELDKNQRQCVQYALKARPLRCYIPKNPYQYRVWYIVTSCYFEYLMFFLIML
NTLCLGMQHCNQSNYVTKLSDTLNLIFTVLFTVEMILKLMAFKVRGYFGDPWNVFDFIIV
IGSVVDVILSEVDAALDSSGGLYCLHGCAETDPMEEIAASENASVSITFFRLFRVMRLVK
LLNRSEGIRNLLWTFIKSFQALPHVALLIVMLFFIYAVIGMQIFGKVALVDGTQIYRNNN
FQTFPQAVLMLFRCATGEAWQDVMMASMYGKRCDPKSDFLPGEENTCGSNFAVFYFLSFY
CLCAFLILNLFVAVIMDNFDYLTRDWSLLGPHHLDEFKKIWAEYDPEATGRIKHLDVVTL
LRRIQPPLGFGKFCPHRAACKRLVGMNMPLNSDGTVTFNATLFALVRTALKIKTEGNFEQ
ANEELRAIIKKIWKRTSMKLLDQVIPPIGDDEVTVGKFYATFLLQDHFRKFLKRQEEYYG
YRPSKKSASGPEIQAGLRSIEEEAAPEMHRAISGDLQNEEEMDRAMDEAAEETIYQRSHG
LFGNRVESFSAEATDAQNSQMTHQRPLQFSESQSESPPNSSALAPSADFFPTTAPKSNTN
NNAFAEFFFDREASPDEFYNPSEDEEPDPRHSWNFTVKTNKTQFPYEPEWMESRSRSSKT
AADQLVQEALEMGGLASLSKDPGFVSVTKKEMADAMHIPLSEMEGVARGILSERSDSIPS
VKKRRPVPVPPPVPAGGGQKPSQPEPAVRKKRRPVPTVPSRRKQNDSEV
NT seq
5550 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaacgcggatgcggccaagccggtcatcatgaacgaggaggaactgaagaag
aagcagagagagaagctgaagcggcttcaggccacaggtggaaaccctcgacctgccagg
accctcttcctcttctccctcaaaaaccctttccgaaaggcctgcatcaacattgtggag
tggaaaacctttgaaatcatcatcctgttaaccatctttgccaactgtgtggctctggct
gtgttcctgcccatgcctgaagaagacagcaacaacaccaacgagaacttggaaagtctg
gagtacatcttccttatcatcttcacgttcgagtgcttcatgaagatcatagcgtatggg
ctggtgttccatgaaggggcctatttaaggaactgttggaacatattggactttgtcatc
gttttcatgggactcttcaccttttgcttggataccataaatatgattgcaggagtggag
aaggaaaagggtggggggtttgacatgaaggctctgagagcgttcagagtactgcggccc
cttcgacttgtttcaggagtacctagccttcaggtggtgatgaactccatcctcaaagcc
atgctgcctctgctgcacattgccctgctggtgttcttactggtcaccatctacgccatt
atgggactggagttgttcaaatgcaaaatgcataagacctgttactacactggcacaaac
atctatgcaacagcagaaggtgagctgcctgctccgtgtgctcaggctggaaacggacgc
cgctgcacgatcaatagttcagagtgcaggcctaactgggaaggtcccaacaacggcatc
actcacttcgataatattggcttcgcaatgctgacagtttaccagtgcatcaccatggag
ggatggaccaaagtcctttactgggtgaatgatgctatcggaaacgaatggccctggctc
tatttcgttcctctcatcttgctgggctccttctttgtgcttaatcttgtcctgggtgtt
cttagtggagagtttaccaaagagcgagagaaggccaggtcacgaggagagtatcagaag
ttgagggagcgtcagcagctggatgaagacctccatggctacatggagtggatcactcat
gctgaagtccttgatgctgacagagaaggcaaaggccttctgcctcttaccagtggagac
tctgacacagacagcctgtatgacttggaaggaaagagtcgtatcatctactattaccgg
ctgggccttcgctggaatcgtttcttcaggatgaagtgtctgatttatgtgaaaaccaag
agcttttattgggctgtgatgttcctcgtattcctcaacacgctgaccatagccacagag
taccaccgacagcctgactccctgacgtctctgcaagatgtagcgagccgaatcctgctg
gtgctgtttgtctttgagatgctggtgaagatgtacgctctgggacccagagcctacttc
atgtcgctgtttaaccgtttcgacttcttcgtcgtgctctgcggcattctggagatgatc
atgttgtctgtaggagccgtggctcctctggggttctccgtgctcaggtgtattcggcta
ctgaggattttcaaagtcacaaagtactggacctctctaagtaacctggtggcctctctc
ctcaactccgttcgctccattgcttctctgctcctccttctcttcctctttattgtcatc
ttctcactcctgggaatgcaggtgtttggagggaagttcaactttgattacaaccgtccc
aggcgcagtaactttgacaactttcctcaggccttgattagtgtatttcagatccttaca
ggagaggaatggaccaacatcatgtacaatggtataatggcatatggagggcctgagatt
cctgggattctagtttccatctatttcattatccttttcgtctgtggaaactatatcctc
ctcaatgtattcttggccattgcggtggacaacctggcagaggctgagagtctgacttcg
gctcagaaggaaaaggcagaagagaagatgagaaagaagctgctaaggtccaaaatgcct
gaaaagactgatgaggagagggagaggatagcaaagaaactggctgagcagagggccaaa
atggagggaatgcccactacagccaaactcaaaatcgatgaatttgagtcaaatgtcaat
gaagtgaaggatccatttccacctgctgatttcccaggtgatgatgaagaggaagaacct
gaaatcccaatcagtcctcggccccgaccaatggccgatctgcagctcaaggaagaagcc
gttcctttgccagaagctagctccttttttatatttggtcctcagaacaagttccgtaag
ctgtgttacaagatcatcaacgcttcgtccttcaccaacctcatcctcctcttcatcctg
ctctcgtccatctcgctggcagctgaagatcccatcgatccaaaatcctatagaaaccag
atcttagcctacgctgatattgtcttcacaactgttttcaccattgagattgtgctgaag
atgactgtgtatggtgcgttcatgcacgaaggctctttttgtcgtaactcgttcaacatc
ctggatctgattgtggtcacagtgtcactcctgtctatgggaatggagtccagcgccatc
tctgtggtgaagattcttagggtgttgagggtgctgaggcctctcagagccatcaacaga
gcaaaaggtttaaagcatgtggtccaatgtgtgtttgtggccatcaagacaattggcaac
attgtcctggtcaccatgctgctgaatttcatgtttgcctgcattggagtgcagctcttc
aagggcaaattctacagctgcacagacccgaccaaagtgactgcagaggaatgcaaggga
tattacttgaagcacatggagaactccctgcaagacacagttctggcgaaaagacagtgg
ataaacagtgactttaactttgacaacgtgctcaatgggatgctggctcttttcaccgtc
tcaacgtttgagggctggcccaagcttctttacagagccatagactcagcagaagaagac
atgggtccagtctataacaaccgtgtggacgtgtccatcttcttcattatctacatcatt
ctcattgccttcttcatgatgaacatctttgtgggctttgtcatcgtcacctttcaggag
cagggagagcaggagtacaagaactgcgagctcgacaaaaaccagcgtcagtgtgtgcag
tacgctctgaaggctcgccctcttcggtgctacatcccaaaaaacccgtaccaatacaga
gtgtggtacatcgtcacctcatgctactttgagtacctcatgttcttcctaattatgctg
aacacattgtgcttagggatgcagcactgcaaccagtcgaattatgttaccaagctgtca
gacactctgaacctgatctttactgtgctcttcactgtggagatgatacttaagctcatg
gccttcaaagtcaggggctactttggagatccctggaacgtctttgatttcataatagtc
atcggtagcgttgttgacgtcatcctgagtgaagttgatgccgccctggactccagtgga
ggactgtactgtcttcatggctgtgctgagacagatcctatggaagaaattgcggcttct
gaaaacgcctcggtctccatcacattcttccgactcttccgtgttatgcgtttagtcaag
ctgctgaaccgttcggagggcatccgtaacctgctctggaccttcatcaagtctttccag
gctctccctcatgtagctctcctcattgtgatgctctttttcatttatgctgtgatcgga
atgcagatctttggaaaggtagccttagtggacggcacccaaatctaccgcaacaacaac
ttccagacattccctcaggccgttctgatgttattccgatgtgcgactggtgaggcttgg
caggatgtcatgatggcttcgatgtacgggaagaggtgtgaccccaaatctgacttcctg
ccaggagaagagaacacctgcgggtccaactttgctgtcttttacttcctcagcttctac
tgtctctgtgccttcctgatcctcaatctgtttgttgctgtcatcatggacaactttgac
tatctcacccgtgattggtctcttcttggtccacaccatctggacgagttcaagaaaatc
tgggcagaatacgaccccgaggccacagggagaatcaaacatctggatgtggtgacgctg
ctgcgacggatccagcctcctcttggcttcggcaagttctgtccacatcgcgctgcgtgc
aagcgtttggttgggatgaacatgcctctcaacagcgatggcaccgtcacgttcaacgcc
accttgtttgctctggtcagaacggcactgaaaatcaaaactgaaggaaactttgagcag
gccaatgaggagcttagagcgattataaagaaaatctggaaacgcaccagtatgaaactg
ctggaccaggtcatcccccctataggagatgacgaggtgactgtggggaaattctacgca
acatttctgctccaagaccatttccgaaagtttctgaaacgccaggaggagtattacggc
taccgtccatcaaagaagagcgcctcgggtccagagattcaggcgggtttgaggagcata
gaggaagaagcagctccagagatgcacagggcaatttcaggagacttgcagaatgaggaa
gaaatggacagagcgatggacgaagctgcagaagaaaccatttatcagcgttctcatggt
ctgttcggcaaccgagtcgaatccttctctgccgaggccaccgacgctcagaactcccag
atgacccatcagcggcccctccagttctcagagagccagtctgagtctccccccaactcc
tctgccctggcgcccagcgcagactttttccccacaacagcaccaaaaagcaacacaaac
aacaacgccttcgcagaatttttctttgacagagaagccagtccagatgagttctataat
ccctctgaggacgaagaaccagacccaagacactcctggaacttcacagtaaaaacaaac
aaaacacagttcccttatgagcctgagtggatggagagtcggagtcggagctcaaagact
gcagccgatcagcttgtccaggaggcccttgaaatgggcggtctggcctccttgtccaaa
gatcctggttttgtctccgtaactaagaaggagatggccgacgccatgcatatccccctt
tcagagatggagggcgtggcgaggggcatcctcagtgaacgctccgacagcatcccctct
gtcaaaaaacgacgtcccgtccctgtacctccacccgtccctgctggaggaggacaaaaa
cccagccagccggagccggctgtcagaaagaagagacgtccggttcccacagttcctagc
cgaaggaaacagaatgactccgaagtttag
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integrated database retrieval system
