Xiphophorus maculatus (southern platyfish): 102237108
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Entry
102237108 CDS
T02923
Symbol
rexo1
Name
(RefSeq) RNA exonuclease 1 homolog isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
102237108 (rexo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xma03009
]
102237108 (rexo1)
Ribosome biogenesis [BR:
xma03009
]
Eukaryotic type
Pre-60S particles
RNases
102237108 (rexo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
Motif
Other DBs
NCBI-GeneID:
102237108
NCBI-ProteinID:
XP_014326051
Ensembl:
ENSXMAG00000002681
LinkDB
All DBs
Position
9:5543589..5561187
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AA seq
1236 aa
AA seq
DB search
MLRSTGFFRGIDCPFYADYNDGKGSRNGCNRPYCHFRHSRQSRPSYGDVKKLQSGQKDQG
YDPFNPEVVRPQEQQNGQPAPSGDLSGALEMVNRAIEEVRGEVEREQRKLSRIGDEPYSP
TEKTGSSSSYVAKSQAAASHLAYDPGSYQITSGGYDPNPGCSKYTLDSDSQKYNSSSSME
YVPTSLKKPQSRTQVPCPPQSTKYLSTACSAQWKYTLDNSGPSTNMEYDPLSNYSAGIAV
KNKRDEGSHPVETDYKKAYRLDASDKEGGTAGKKPPQASKDLKKYTISDSDEESSGTEYR
PTSLSNLQQRKANIVSARDALGKDTKDRSKSIKGALTQRNKEELAQDLDSQENTKQKENL
EKRKLADQSGHGKISKPEKTQNIDKEVKKSSSVKSSSGSSSSAKDKLSCKNFKQDSAKKE
NKNQKDGSKNMLKMKDKVQREGRDEKRCESKSKMVEKVKRALSEQEKDARESKKLKPSER
EKDQSKNKDSQHRNGKLDSSRREKDVKKSKSSSSSCKGSSAKAKQSASSSKEKLEDLSLS
HADLFGDESPEEADPMEADSDDEPEEVLVRKSADALKRGLMSKRTASERTPSSSEDKADG
EPERSRSSWEEPDDVRVDFSMFQDDLDFDSDPMEECLRIFNESNDVKKEDKGRQAKQASR
DSEEERSTDSTLTTLFPGQKKRVSHFVAKGDTDAPSKTVVRPYKRPTPQEVCFQRMQLAQ
QQAAQLSASVKAASQSSTSSFTGEKKRIAHRPNPQITSTKTTGPAHGKPAASETPQGVKS
QTTAGILSKTSSTMAQKRTAHTPTMKSSSMRRPVIPTEFGAKVPTNIRQRYLNTFIDECV
KFCPSEDVAFQTALDEEKLVYERSSSKNIYLNVAVNTLKKLRGKSSSCSSPVKKDSRLAA
KRKAQSHEEVLGGRLAATTSFTVNRSGKQQEEKLSGANLYRKLQAYLMTEEQLQEHGYPR
LNPEAPGKAVIYNQPERKICPDPFGRICCRCGAEYKVSVNGSCVRREECSYHWGRLRRHR
VAGGWETTYSCCSAAVGAPGCQIAKQHVQDGRKESLDGFVSTFSKPLPPDGNGGVFALDC
EMCYTKQGLELTRVTVIDSEMKVIYDTFVKPDSKVVDYNTRFSGVTEEDLVNATITLRDV
QAVLLSMFRAESVLIGHSLESDLLALKLIHSSVVDTAIVFPHRLGLPYKRALKTLMADYL
KRIIQDNVEGHDSSEDASACMELMIWKIKEDAKVKR
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgttaaggtccaccggcttcttccgagggattgactgtccgttttacgcggactacaac
gacggcaaaggcagtagaaatgggtgtaacagaccgtactgtcacttcagacacagccgg
cagagtcggccgtcctacggagacgttaaaaagctgcagtctggacaaaaagaccagggt
tacgatcccttcaacccagaagtagtgagacctcaggagcagcagaatgggcagcctgct
ccttctggggacctcagcggcgccttggagatggtcaacagagccatcgaggaagtccgt
ggcgaggtggagcgagaacagcggaagctgtcccgcatcggagacgaaccttacagtccc
actgagaagaccggttcgtcttcatcctacgtcgctaaaagccaagcagcggcctcgcac
ctggcttacgaccctgggagctatcagatcacatcgggaggatacgatcccaacccgggc
tgcagcaagtacaccttggattcagacagtcagaagtacaacagcagcagctctatggaa
tatgttcccacttccctgaaaaagcctcagtctcggacacaagtgccctgtcctccccag
agcaccaagtatctgagcactgcatgctctgcacagtggaaatacactctggacaactct
gggccgtctacaaatatggagtatgaccctctgtccaactactctgcagggatcgcagtg
aaaaacaagagagacgagggttcacatccagttgagactgactataagaaggcatatcgg
ctggatgcttcagataaggagggtggtacagctgggaaaaagccaccgcaggcgagtaaa
gacttaaaaaagtacaccatctccgactctgatgaggagagctctggaacagagtaccga
cccacatcgcttagcaatctccagcaaagaaaggccaacattgtgtcggccagagacgct
ttggggaaagatacaaaagacaggagtaaaagtataaagggcgctcttacacagaggaac
aaggaggagcttgcacaggacttagactcacaggaaaataccaaacaaaaggagaacttg
gagaaaaggaagctggcagatcaaagtggtcatggtaaaattagcaaaccagagaaaaca
caaaatattgataaagaagtaaagaaatcatctagtgttaaaagtagcagtggtagcagc
agtagtgcaaaagacaaattatcatgtaagaactttaagcaagactctgcaaagaaggag
aacaaaaatcagaaagatggtagtaaaaacatgctaaagatgaaggataaagttcaaaga
gaaggcagggatgaaaagagatgtgagagtaagagcaagatggtggagaaagttaagaga
gccttaagtgaacaagagaaagatgcacgagaaagcaaaaaactgaaaccatcggagcgt
gagaaagaccaaagcaagaataaagacagccagcacagaaacggtaaactggatagcagt
agaagagaaaaggacgttaagaaaagcaaaagcagctccagcagctgcaaggggagctcg
gctaaagcgaagcaaagcgccagctcgtcaaaagagaaactcgaagacctgagtctgagc
cacgcagatctgttcggagacgagagccccgaggaggccgacccgatggaggcggacagc
gacgacgagccggaggaagtcctggtcaggaaatcagccgacgcgttaaagaggggacta
atgagcaagaggacggcttcagagaggacgccatcttcctctgaggacaaagccgacggg
gaaccggaacgcagcaggtcgagctgggaggagcctgacgacgtccgagtcgacttctcc
atgtttcaggacgatctggacttcgactcggatccaatggaggagtgtttgcggatcttc
aacgaatccaacgatgtgaagaaggaggacaagggacggcaagcaaagcaggcttccagg
gattcagaggaggagagaagcacagatagcactttaaccacactcttccccggccaaaag
aagagagtgtcccattttgttgccaaaggagataccgatgcaccttcgaagacagtggtc
cggccgtacaagcggcccactccgcaggaagtctgcttccagcgtatgcagctggcgcag
cagcaagccgcccagctttcagcgtcagtcaaagccgcctcacagagctcgacctccagc
ttcactggagaaaagaagagaatcgctcaccggcccaatcctcagataacctccaccaag
acgacaggtccagcacatggaaaaccagctgccagtgagactccccagggggtgaagagc
caaaccacagctggcattctgtccaaaacctcgtctacgatggcgcagaagaggacggca
catacacccaccatgaagagctcctccatgaggcgtccggtcatccccactgagttcggg
gcgaaagttcccaccaacatccgccagcgctacctcaacacgttcatagatgaatgtgtc
aagttttgcccgtcggaggatgttgcatttcagacggcccttgatgaggagaagctggtg
tacgagcgcagtagcagtaaaaacatctacctcaacgttgccgtcaacacgctgaagaag
cttcggggcaaaagcagctcgtgttcatcacctgtcaaaaaggattccaggcttgcagct
aagcgaaaggctcagtcccatgaggaggttctgggaggtcgtcttgcagccacaaccagc
ttcactgtcaaccggtcgggcaaacagcaggaggagaaactctccggcgccaacctgtac
aggaagctgcaagcgtacctgatgacagaggagcagctgcaggagcatggatacccgcgg
ctaaaccccgaggccccgggcaaggccgtcatctacaaccagccagagagaaagatctgc
ccagacccgttcggcaggatatgctgccgctgcggcgccgagtataaggtcagcgtcaac
ggcagctgcgtccgcagagaggagtgcagctatcactgggggcgtttacgtaggcacaga
gtcgccggcggctgggagacgacgtacagctgctgctcggctgctgttggagctcctgga
tgccagatagcaaagcaacatgtgcaggacggccgtaaagagtccctggacggcttcgtg
tcgacgttcagcaaaccgctgccaccggacggaaacggcggagttttcgctttggattgt
gagatgtgctacactaagcagggcctggagctgaccagggtcacagtcatcgactccgag
atgaaggtcatctacgacacgtttgtgaagcccgacagcaaagtggtcgactacaacaca
cgattctcaggcgtcactgaggaggacttggtgaacgccaccatcaccctgagagacgtt
caggcggttctgctcagcatgttcagggcggagtccgtcctcatcggacacagtctggag
agcgacttgctcgcactcaagctcatccacagctcagtcgtagacacagccatcgttttt
cctcaccgcctcggtctgccctacaaacgtgccttgaagactctgatggccgattacctc
aaacgcatcatccaggacaatgtggagggccacgactccagcgaggacgcgtcggcctgc
atggagctgatgatatggaagattaaagaggatgcaaaggtcaagagatga
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integrated database retrieval system
