Xiphophorus maculatus (southern platyfish): 102237152
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Entry
102237152 CDS
T02923
Name
(RefSeq) inner ear-specific collagen-like
KO
K24214
otolin-1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xma04990
]
102237152
Domain-containing proteins not elsewhere classified [BR:
xma04990
]
C1q domain-containing proteins
Adiponectin / short collagen group proteins
102237152
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GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
102237152
NCBI-ProteinID:
XP_005796042
Ensembl:
ENSXMAG00000015691
UniProt:
A0A3B5R5Q1
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Position
6:complement(13978384..13985710)
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AA seq
493 aa
AA seq
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MPSADLILVTTVFMAFIITLTSGGRTTHWPKPQNTNKPPQTGTSGFGGGLRSGQIATKNP
SPSSSLHTEETTGFMTDGYSLSPTESNIFNSEAYPTEYLTDAILPPGNAPGNYTFDYNEC
FFNVCECCPPEKGPEGPTGEKGSPGERGPPGLPGEKGEIGPPGSPGPAGLPGLSGLNGEK
GGKGDQGPNGLPGSPGVPGKPGEKGDLGFKGEKGENGINGLKGDAGEKGEPGHNGTMGTI
GPMGPPGTAGTKGQKGEQGRLGECLLGERGQKGDLGDPGPPGPKGEMGPQGANGSDGSKG
EMGPAGEKGDTGARGPPGARGVAGMKGERGVKGVRGPRGPKGDPGESLEPVRSAFSVGLF
PSRSFPPPGLPVKFDKVYYNEEGHWDPALNKFNVTHSGVYLLTYHITVRNRPLRVALVVN
GVRKVRTRDSLYGQDIDQASNLVLMQLSEGDQVWLETLRDWNGVYSSSEDDSTFSGFLIY
PNSTTKTSAMKKI
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgccatccgctgatctcatcctggtgaccaccgtctttatggccttcattattacgctc
acgtctggtggcaggaccacgcactggcccaaacctcagaacaccaacaagcctcctcaa
actgggaccagtggtttcggtgggggattaaggtctggacagattgctacaaaaaaccca
tctccctccagcagcctgcacacagaagaaacaactgggtttatgacggatggatactcc
ctgtccccaacagaaagcaacatcttcaacagtgaggcttacccaactgagtacctcact
gatgcaatcctcccccctggaaatgcccctggaaattatacatttgactacaatgaatgc
ttcttcaatgtttgtgagtgctgtccaccagagaaaggtcccgaaggtccgactggcgaa
aaggggtcaccgggggaaaggggccctccagggttaccaggagaaaagggagaaattgga
cccccgggttctccgggaccagctgggttacctgggctcagtggattaaacggagagaaa
ggtggaaaaggagatcaagggccaaacggtttaccgggctcccctggagtcccagggaaa
cctggagaaaaaggtgatttgggcttcaaaggagagaaaggtgaaaatggaatcaatggg
ctgaaaggagacgcaggagaaaaaggagagcctggtcacaatggaactatgggcaccatt
ggacctatgggtcctccagggacagctgggacaaagggtcagaaaggtgaacagggacgt
ttgggagaatgtctgcttggtgagagaggacagaaaggtgatcttggtgatcctgggcct
cctggtccaaaaggtgagatgggtcctcaaggagcaaatggcagtgatggttcaaaaggc
gaaatggggccagcaggagagaagggagacactggtgcaagagggcctccaggtgcaagg
ggagtagcaggaatgaagggggagaggggagttaaaggtgtacggggccctcggggccca
aaaggcgatccaggtgagagtttggagccggttcgttctgctttcagtgtgggtttgttc
ccaagtcggtcctttcctccacccggactgcctgtgaagtttgataaggtctattacaat
gaggagggtcactgggacccggcactcaacaagttcaacgtcacacactcgggagtctac
ttactcacttatcacatcactgtgcgcaaccggcccctgcgggttgccttggtggttaat
ggggtgcggaaagtgaggacacgagattccctttacggccaggacatcgaccaggcttcc
aaccttgtcctgatgcagctcagcgagggagatcaggtgtggctggagaccctgagagac
tggaacggggtttactccagcagcgaggacgatagcaccttctctggcttcctgatttac
ccaaactcaactacaaaaacaagcgctatgaaaaagatttga
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