Xiphophorus maculatus (southern platyfish): 102237365
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Entry
102237365 CDS
T02923
Symbol
trip13
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
102237365 (trip13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xma03036
]
102237365 (trip13)
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
102237365 (trip13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_22
AAA_16
nSTAND3
TIP49
Viral_helicase1
AAA_18
AAA_24
AAA_14
AAA_5
NPHP3_N
AAA_33
bpMoxR
TsaE
RuvB_N
NACHT
AAA_28
Cytidylate_kin
AAA_7
RNA_helicase
ABC_tran
DUF815
AAA_30
AAA_11
AAA_17
ATPase_2
AAA_25
IstB_IS21
AAA_19
Rad17
ATPase
DUF6393
SLFN-g3_helicase
Mg_chelatase
PduV-EutP
NB-ARC
PhoH
DnaB_C
AAA_3
Sigma54_activat
Cytidylate_kin2
Motif
Other DBs
NCBI-GeneID:
102237365
NCBI-ProteinID:
XP_005804742
Ensembl:
ENSXMAG00000014062
UniProt:
M4AHZ8
LinkDB
All DBs
Position
3:complement(15636795..15643825)
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AA seq
420 aa
AA seq
DB search
MEGDPMEMTPIPNIHVEVHVKSMSTAKSSEVKMHVQALLNRHSMTFGNYRWTEFDDNFLH
KHVDSVVIDLQETTQPLDLKSCDVSIHVFTLNEEGPSTLSLEEDENLSAANHWLLPTAEF
DGLWESLVYETGLKSKLLDYVTTTIYFSDKNVDSNLISWNRVVLLHGPPGTGKTSLCKAL
AQKLSIRLSSRYTIGQFVEINSHSLFSKWFSESGKLVTKMFQKIQLLIDDKDALVFVLID
EVESLTAARKACQAGTEPSDAIRVVNAVLTQLDQIKRYPNVVILTTSNVTEKIDLAFVDR
ADIKQYIGPPSEKGIYNIYLSCLEELMKCQIIYPRQQLFTMYELETMGFVRSEISELSLK
LRNIAVKSKGLSGRALRKLPFLAHALFVQTPPVTLERFLKAMCRAVDKQREEEANLINGV
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcgacccaatggagatgacacccatcccaaacatccatgtggaggtccatgtt
aaatctatgagcacagctaaatcgtctgaagtgaagatgcacgttcaggcgctgctgaat
cgccacagcatgacttttggaaactacagatggactgagtttgatgacaatttcctgcat
aagcatgtggattctgtggtcattgatcttcaggagacgacacagcccctcgatttaaag
agctgtgacgtctccattcatgtcttcactctgaatgaggaaggacccagcacactcagt
ttggaggaggatgaaaacctttcagcagctaatcactggctcctgccaacagctgaattt
gatgggctctgggagagtcttgtatatgaaacgggattgaaatccaagcttttggattat
gtcacaacaacaatttacttctcagataaaaacgtcgacagcaaccttatttcctggaac
cgcgtcgtgcttcttcacggacctccaggcacagggaaaacatcactctgcaaagctctt
gcccagaaactgtcaatcaggctgtcaagtcggtataccattggccaatttgtggagatt
aacagtcatagtttgttctcaaaatggttctcagagagcggtaagctggtcacaaagatg
tttcagaaaatccaactactgattgacgacaaagacgctctggtgtttgttttgattgat
gaggtggagagcctgacagcagccaggaaggcctgccaggcgggaacagagccgtctgat
gccatccgagtggtcaacgccgttctcacacagctggatcaaatcaaacggtatcccaac
gtggtcatcctgacgacgtccaacgtgactgagaagatcgacctggcgtttgtggacaga
gccgacatcaagcagtatatcggacctccgtcagagaaaggcatctataacatctatctc
tcctgtctggaagagctgatgaaatgccagatcatctaccccaggcagcagctttttact
atgtacgagctggaaaccatgggctttgttaggagcgagatttctgagctcagtctgaag
ctgaggaacatcgctgtaaaaagcaaaggtctgagtggaagagcgctcaggaaattaccc
tttctagctcatgccctctttgtacagacaccaccagtaactctcgaaaggttcctgaag
gcaatgtgccgagcggtggataaacagagggaggaagaggccaatctgatcaatggtgtc
tga
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