Xiphophorus maculatus (southern platyfish): 102237477
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Entry
102237477 CDS
T02923
Symbol
exosc4
Name
(RefSeq) exosome complex component RRP41
KO
K11600
exosome complex component RRP41
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102237477 (exosc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xma03019
]
102237477 (exosc4)
Messenger RNA biogenesis [BR:
xma03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
102237477 (exosc4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
102237477 (exosc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
102237477
NCBI-ProteinID:
XP_005812923
Ensembl:
ENSXMAG00000016287
UniProt:
M4APB6
LinkDB
All DBs
Position
6:complement(16728389..16730549)
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AA seq
245 aa
AA seq
DB search
MAGLELLSDQGYRLDGRKSTELRKVQARMGVFAQADGSAYLEQGNTKALAVVYGPHEMRG
SRSRALHDRAVINCQYSMATFSTAERKRRPHGDRKSTEMSLHLKQTFEAAVMTQLFPRSQ
IDIYVKILQSDGGNYSVCVNAATLAVIDAGIPMRDYVCACTVGFVDETPLADLCYAEESG
GVSSLALALLPRGGQIALVQMDARLHQDHLGTLIEAAMTACKCVSKVLDEVVRQHLQETS
VLSRE
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcttggagctgctctctgatcagggataccgcctggatggaagaaaatccacc
gaactacggaaagttcaggcccgtatgggagtgtttgcccaggctgacgggtctgcttat
ttagagcaaggaaacaccaaggctctggctgtggtctacggtccgcacgagatgcggggc
tccagaagtcgggctcttcacgatcgagctgtcatcaattgccagtacagcatggccacg
ttcagcacagctgagaggaagaggagaccacatggagatcgcaaatccaccgagatgagt
ctccacctgaagcagacgtttgaagctgctgtgatgacccagctcttcccacgctctcag
atagacatctatgtgaagattctgcagtcagatggagggaactacagtgtatgtgtgaat
gctgccacattggcagtcattgatgcaggcatccccatgagagactatgtctgcgcctgc
accgtaggttttgtcgacgagactccccttgccgacctttgctatgctgaggagagcgga
ggagtgagttctctggctttggcactgctgccccgaggaggacagattgctctcgttcag
atggatgctcgacttcatcaggaccacctgggaactctgattgaagccgcaatgactgct
tgtaaatgtgtgagcaaggtgttggatgaggtggtgaggcagcacctccaagaaacgtcg
gtgctctccagagagtaa
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integrated database retrieval system
