Xiphophorus maculatus (southern platyfish): 102237531
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Entry
102237531 CDS
T02923
Symbol
tulp4
Name
(RefSeq) tubby-related protein 4
KO
K24720
tubby-related protein 4
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xma04990
]
102237531 (tulp4)
Domain-containing proteins not elsewhere classified [BR:
xma04990
]
Other domain-containing proteins
Tubby family proteins
102237531 (tulp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
ANAPC4_WD40
Beta-prop_WDR19_1st
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_Prp19
WDR55
Beta-prop_ELP1_1st
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
102237531
NCBI-ProteinID:
XP_023203580
Ensembl:
ENSXMAG00000003229
UniProt:
M3ZLZ8
LinkDB
All DBs
Position
15:9833138..9857377
Genome browser
AA seq
1738 aa
AA seq
DB search
MFASVEHGPVLCSDSNILCLSWKGRVPKSEKEKPVCRKRYYEEGWLATGNSRGVVGVTFT
SSHCRRDRATPQRVNFNLRGHNSEVVLVRWNEPFQKLATCDTDGGIFVWIQYEGRWSVEL
VNDRGAQVSDFTWSHDGTQALISYRDGFVLVGSVSGQRHWSSEINLESQITCGIWTPDDQ
QVLFGTADGQVIVMDCHGRMLAHILLHESDGIVGMSWNYPSFLVEDSSESDTDSDDYTPP
KVHSQKPLLTVSFTSGDISLMNSYDDLSPTLIRTGLKDVVVQWCSQGDLLAVAGMERTVL
LSPDTPCSPPTKNAIVKFYNVRGDHIYTLDTPAQRPITTLCWGHRDSRLFLASGPALYAV
RVDHRVAALQLLCQQVIATAVKEEKDVAKLTMPSRLCTYVTAAFAPTIKPPIPDPNNMRD
FVSYPTSGNERLHCTMKRTEDNPEVGGPCYTLYLEYLGGLVPILKGRRISKLRPEFVIMD
PKTDGKTDEIYSNSLISAMIDSCNCSDSSDIELNDDWVGKKSPKISRGSKSPKLPRINID
PRKSPKLSRTTQEISRSPRLPLRKPSIGSPSLSRREFPLDDINQQNYLAQVTSNIWGTKF
KIVGLAAFLPTNLGAVIYKTSLLHLQPRQMTIYLPEVRKISMEYINLPVFSPNVFSEDED
DLPVSGPAGSTDDNPPCTVNIPIAPIHSPAQAMSPAQSIGLVQSLLANQNVQLDVLSNTT
AAPSGSSASGSDQTQDAILTTQYTVPTRYSSPGQVIFGGLDVGRLMVGPPLTHHPSQQQQ
QSQQQLLQHQQIQHHQQQQQQQILQQHHLQQQQQQQHIQQQQQLQQHIQMQQHQQMQLQQ
QQQMHHQLQSQQHHLQHQLQIQIPAPSLSPGQPSGTALHQLQPGALQIQIPHQPADLVVD
RTAGGEHEHLLKIKTTRSTPQLADADTVVFSAPLELSKMNPPPPYPGTVAAAVAAAAAAA
SPSASNAASSSSSGTEGGASGTPPPSELCVKKGDFKLYPPGQQQLQYPTPLGYERITTFD
SSGNVEEVCRPRTRLVCNQNVYTLQGPGNSATLRVTSSSSSSAADKKIQLPYTSATLNRL
TAPRYSIPSGDPPPYPDSANQSGAAGRNPNQRLDSSLIHATLRRNSREAALKVSQMLEPP
RPLPPKAKNSPLATSFQQRVPTALYTCSQCSSGSSVGGSAPGSANGIAGGTIIRQDFPPG
NGAPHSTVIVHSSSAAALASQSSYSLMSSLEGSGSAAGAGGNRDRAEYVNSAFTEDETLN
QSLRHLVIGGNDASGLVVKRPPPYQWDPTGTEEVWIPQERTANVPPGAHKPPPLILSPTQ
HLDVTRLPFVLSPKSPTSPSAASFQAAAAATATGYQISLQYPPAAAYAGAQLQPIPGSPR
PCASPKEVVAPVALSQQDATLVLSPGYSPNIANLACCPLPPLYPGGSSCAGIPIPPIALH
TPWGTYNPCPPMPSPAVPLPPKASHVSADKNVLSPPPPQPPPPPADPQSHGALQETMAEP
GDAYQEVLSLTESPVPQRSEKFSKKNRKRMDGRAEEANVSQLAEGSKSKKEGRALGDFNS
LISSPRLGGRDKKKLKGQKEQQMKAKKLSKATANSEFQDSSESEPELFISGDELLNQCQS
GKKGWKSKRNLRAASELDEIKCRKANEKEDRGLGSQGFVYVMANKQPLWNEATQVYQLDF
GGRVTQESAKNFQIELEGRQVMQFGRIDGNAYILDFQYPFSAVQAFAVALANVTQRLK
NT seq
5217 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcttccgtggagcatggcccggtgctctgtagcgactccaacatcctgtgtctg
tcctggaagggccgagtgcccaagagtgagaaggagaagccggtgtgcaggaagcgctac
tacgaggagggctggctcgctaccgggaacagccggggggtcgtcggggtcacattcacg
tccagccactgcagacgggaccgggccacgccgcaaagagtgaacttcaacctcagagga
cacaacagtgaggtggtattggtgcggtggaatgagcctttccagaaactggccacatgt
gacacagacggagggatttttgtatggattcagtacgagggccggtggtctgtggagctc
gtcaacgaccgtggagctcaggtgagtgacttcacctggtcgcatgatggaacgcaggct
ctcatctcataccgtgacggctttgtcctggtgggctctgtcagcggacagagacactgg
tcttctgagataaacttggaaagtcagattacctgtggaatctggactcctgatgaccag
caggtgttgttcggcacagcagatggacaggtcatagtcatggactgccacgggcgtatg
ttggcccatattctgctccatgagtccgatggcattgttggcatgtcatggaactacccc
agcttcctggtagaggacagtagtgagagtgacacagactccgatgattacactccaccc
aaagtgcacagccagaaaccactgctgacagtcagcttcacctctggagacatcagcctg
atgaatagttatgatgacctctcacccacactgatccgaaccggtttgaaagatgttgta
gtccagtggtgctctcagggtgaccttttggcagtggcagggatggagaggacagtcctc
ctctcccctgacactccatgttctccacccaccaagaatgccattgtcaagttctacaat
gttagaggggatcacatctacacactagacacaccagcacagcgccccatcactacactc
tgttggggtcacagagactcgcgtctgttcttggcgtcaggcccggcgctttatgcagtt
cgagtggatcaccgggttgcggcgctacagcttctctgccagcaggtcatcgccacagcc
gtaaaggaggagaaagatgtcgccaagctcaccatgccttcccggctctgtacctacgtc
actgctgctttcgcccccaccatcaagccacccatcccagatcccaacaacatgcgggat
tttgtgagctacccgacatccgggaatgagcgactgcactgtaccatgaagcgcacagag
gataacccggaggtgggcgggccgtgctacactctgtacctggagtacttgggtggtctg
gtgcccatcctgaagggtcgacggattagtaagctgcgccctgagtttgtcattatggac
cccaaaacggatggtaaaacagatgagatatacagcaacagtctgatatcagccatgata
gacagctgtaactgctcagactccagtgatattgagctcaacgacgactgggttggcaag
aaatctccaaagatatctagaggaagcaaatctcctaaacttcccaggataaatattgac
cccagaaaatcacccaagctgtctcgaactacacaagaaatctctaggtcgccacggtta
cccttaagaaaaccctcgattggttcaccgagtctctcacggagagaattccctctggat
gacatcaatcagcaaaattacctcgctcaggtcacatccaatatttggggaacaaagttt
aagatagtgggactggctgcatttttacctaccaatctcggtgcagttatctataagacc
agcctcctccatctgcagcccagacaaatgaccatctacctgcctgaggtgcgcaaaatc
tccatggaatacatcaacctgcctgttttcagccccaatgtcttcagtgaggacgaggac
gaccttcctgtatcgggccctgctggaagcactgacgacaaccccccatgtactgtaaac
atccctattgcccccatccacagccctgcccaggccatgtcccctgcccaaagcatcggc
ctggtccagtctctgctagccaatcagaacgttcagcttgatgtcctcagtaatacgaca
gcagctccttctggatcatcggccagcggttcggaccaaacccaggatgccatcttgacg
acccagtacaccgtgcccaccaggtattctagtccgggtcaggtcatttttggggggctg
gacgtaggtcggctaatggttggaccaccgctgacccatcatccatcacaacaacaacaa
cagagtcagcagcagcttctacaacatcaacaaattcagcaccatcaacagcagcagcag
cagcaaatactccagcagcatcacctacagcagcagcagcagcagcagcacattcaacag
cagcagcagcttcagcaacacatacagatgcagcagcatcaacaaatgcagttgcagcaa
cagcagcaaatgcatcaccagctacagtctcaacagcaccatcttcagcatcagcttcag
atccagatccctgctccgtccctgtcaccggggcaaccttcaggaacggccctgcaccag
ctgcagccgggggccctgcagatacaaatcccccaccagccagccgatttagttgttgac
agaacagcgggcggggagcacgaacacctgttgaagatcaaaaccactcgatcaacgcca
cagttagctgacgctgatacagttgtgttcagcgctcctttggagctcagcaaaatgaat
ccgccgcctccttaccccgggactgtggccgcagcggttgccgctgctgcagctgcagct
tcaccatcagcttccaacgcagcttccagctcttcgtctggaacagaagggggcgctagt
ggaactcctccccctagcgagctctgcgtgaagaagggtgacttcaaactttatcctcca
ggtcagcagcaactacagtaccccacgcctctgggctacgagaggataacgacgtttgac
agcagcgggaacgtggaagaggtgtgtcgccctcgaacacgcctcgtctgcaaccagaat
gtctacacgctccagggacctggcaactctgccactctcagggtcacttcctcttcatcc
tcgtctgcagctgacaagaaaatccagctgccctacacctctgctacgcttaacagactc
accgcaccccgctactccataccaagcggagacccacccccataccctgattcagccaat
cagagcggagctgctgggaggaatccgaaccagcgactcgacagcagcttgatccatgcc
accctcaggaggaacagccgagaggccgcgcttaaagtctcccagatgctggaaccgcca
aggccacttcctccgaaagctaaaaacagtccactagcaacctccttccagcagagggtg
ccaacagccttatacacgtgcagccagtgcagcagtggatcaagtgttggcggtagtgct
ccagggagcgctaatgggatagcagggggaacgattatcaggcaagatttccctccaggg
aacggcgctccacacagcacagtgatagttcactccagcagcgccgccgctctggcctcc
cagtcctcatacagcctgatgagctcactggaggggtctgggagtgcagcgggagcagga
gggaacagagaccgggctgagtatgttaactcagcgtttactgaggatgaaacactcaac
cagtcgctgaggcatttggtaattggaggaaatgatgcatcggggcttgtcgtcaaacgc
ccacctccctaccagtgggacccgactggcacagaggaggtgtggatacctcaagagagg
acagcaaatgttccccctggagcgcacaagcctccgcccctcattctcagcccgactcag
cacttggatgttaccagactgccttttgttctttctccaaagtctcccaccagccccagc
gctgcatcattccaggctgcagcagcagctacagccacaggctaccaaatctctctgcag
taccccccagcagcagcctatgccggagctcagctccaacccatcccagggtcgccgcgc
ccctgcgcctcccctaaggaagttgtggcgcccgtggccctctcacagcaggatgcgacc
ctcgtcttgtcgccgggttactctccaaacatagcgaacctcgcctgctgtccccttcct
cccttgtatcccggaggaagttcctgtgctggaatccccatccctcccattgcccttcac
acaccgtggggaacgtacaacccttgtccgcctatgcccagtcctgcagtgccacttcca
cccaaagcctcccacgtgtcagcagacaaaaatgttctctcacctcctcctccacagcct
ccaccaccaccagcagacccacagagccacggggcgttacaggagacaatggcagagcca
ggggacgcttaccaggaggtgttgtctttgactgagagccccgtaccacagcggtccgag
aagttcagcaagaagaaccgcaagcggatggacggccgggccgaagaggctaacgtgtct
cagttagccgaaggcagcaagtcgaagaaagagggcagggctctgggggatttcaactcg
ctgatctccagcccccgactgggaggaagagacaagaagaaactgaaggggcagaaggag
cagcaaatgaaagcgaagaagctgagtaaggccacggccaacagtgagttccaggacagt
tcagaaagcgagccggagcttttcatcagcggcgatgagctccttaatcagtgccagagc
gggaaaaagggatggaaaagtaaaaggaacctgagggcagctagcgaacttgatgaaata
aagtgccggaaagccaatgagaaggaagacagaggattgggcagccaagggtttgtgtat
gtgatggccaacaagcagcctctgtggaatgaagccacacaggtctaccagctggacttt
ggaggccgagtcacgcaagagtcggccaagaactttcaaatcgaactggagggccggcag
gtgatgcagtttggtaggattgatggtaatgcctacatcctggacttccagtaccccttc
tctgcggtccaggctttcgcagtggctttggccaacgtcacccaacgcctcaaatga
DBGET
integrated database retrieval system
