Xiphophorus maculatus (southern platyfish): 102237535
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Entry
102237535 CDS
T02923
Symbol
ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102237535 (ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xma03019
]
102237535 (ttc37)
Messenger RNA biogenesis [BR:
xma03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
102237535 (ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_14
TPR_16
TPR_19
TPR_8
TPR_17
TPR_11
TPR_CcmH_CycH
TPR_12
TPR_9
ANAPC3
TPR_7
TPR_MalT
PknG_TPR
TPR_15
Motif
Other DBs
NCBI-GeneID:
102237535
NCBI-ProteinID:
XP_023199544
Ensembl:
ENSXMAG00000019400
LinkDB
All DBs
Position
12:complement(21658365..21672781)
Genome browser
AA seq
1569 aa
AA seq
DB search
MSNKEVKAALKSAREAINNKEFKEVLKHCKAVLKLEKNNYNAWVFIGKAASELEQPDQSQ
AAYRKAVELEPEQLLAWQGLANLYENTDQWDFKDELPSVYQKLVELYAKTDKTKSYDMIK
KLSDIYQSDREYLKLAKVWLQLVQLKEEEGVDKKELVQLLQKMTHLLSDCINDEEQDNET
QQHLITAFEKAMILTEPVPGEEHKKLSADYIKCLSKLPHEESKMKEACQSMSSVYPNQTY
PLEVLCSLYLKTNNMDEDAVSCFSRLLEMAPNSGLGHLGLGTKALLEGRYKEAVDDLEKG
VKTVSSAMGWHSLAEAQFKIHRHSDSAASCSQGLNVCTSEDKELRDKLLRLKLEALVRSE
GEQAASQALETFSQITEAEKDLVLLALKGRAYLNKGQIDQSLKLLSEPEVSNPNLPQGLA
LRGLAHLAEGQLQLAEQSFLQATKQAPDSGEYFFFLGKLYWDMGSETRKDRSKTHTYLLK
AAKLDPHLGCAFRYLGHYYREVANDIARAQGCYRKAFQLNSGDAESGAALVDLSMGQGDM
DSALAILESVTEKATPGSAKWAWMRRGLYYLKIGEHQQATADLQAALRADPEDWVCWECL
GEAYLNRRSFTAALKAFGKAHQLQPSSIYSVYQAAAIKQTLGKFKEAVDEYLQITTQQDY
VPALKGLGECQLSLAKSLMEDCRDGGAIDLIQQSIHNLFRAVQLRPDLSCLWKLLGDACT
AVRVVSPSRAQVVVPTLLSGFDSSTQDHMLNQAQTLKAGERCYAHALKLMPEVASLWYDL
GLNYYHQATNSPCSTDEHQNSLNLEKAQQCLKKAIKMDSGNYSYWNALGVISMSRGLESY
ALAQHCFIKSIEVEPNNVVAWTNLGTLYLKKDNIELAHEAFKIAQSLEPLYVKCWIGQAL
IAERVGSYDTMDLFRHTTELSTHMEGVKGYAYWVCSTLLDKSNRDSDLYRYNIVQMNAIS
AAHVALCKYTERIQSDPDAFIMLGYLNEHLQLKRQALQAYQRAVELLQSSSSSEVLVFSL
GSCARALCNSGQWDEAVQVYKSTPLQDLSDLVGLALAYFRAGLYPESISVYERALAVTSN
EKEKAYILTALALLQHQQGNLDSAKTLLFKCSVLKEPISESLLCLCALGLVHSDATLAAA
ALTELLKQGSASGGVVEQRCLLTCSLLALQGNYSAVQREASRAVHSNPGNPSLWALLSRV
IPQYYPRKAQGGAVAGHIACLFSMTQGKRALLFSGVNQVACGRHTGEDPHRNALKTMQKA
VLLCPDDPATWAGLMAACHTENTSCYLSGSAPRRHSLEHTLMSVVSEKVRSVEEMERPLT
QALEGWVLQQAVSGLMQQGQLEQAEALCTQVLNVSPEHPAVMLSLMQVQCQRLLMADGGT
VLTEQVLEQLNKVIMMNPTNLGAWHWLAEVYRSQGLLVQAVMAYRQSLQLALQLGAHSFQ
IASLLRLALLALGPCMAGVPGNEWKDLVMEATTEVLKLGSSPMALLFQALLQYVTKMTAR
ETRRLLERSVYVSSDDFPVTVVQVASWYLLRHLHAKNDQELLNVLLQHAKMNGNQRLLDF
YTELTSSSS
NT seq
4710 nt
NT seq
+upstream
nt +downstream
nt
atgtccaataaagaggtgaaagccgctctgaaaagtgccagagaggccattaacaacaaa
gagttcaaagaagtcttaaagcactgcaaggctgttctgaaacttgaaaagaacaattac
aatgcctgggtgttcatcggcaaggcggccagtgaactggaacaacccgatcagtcacaa
gcagcctataggaaagcggtggagctggagcctgagcagctgctggcctggcagggttta
gcaaatctttatgaaaatactgatcagtgggatttcaaagatgagctgcctagtgtctac
cagaagcttgtggagctttatgcaaagacggataaaactaaaagctatgacatgatcaaa
aagctgtcagatatttatcagtctgacagggaatatttgaagctggctaaggtttggctc
cagctcgtccagctgaaggaggaagagggtgtggacaagaaggagttagtgcagttattg
caaaagatgacccatctcctctctgactgcatcaatgatgaggagcaggacaacgagact
caacagcatttgataacggcatttgagaaggccatgattctcactgagcctgtgcctgga
gaggagcacaagaagctctcggctgattacattaaatgtctttcgaaactgccacacgaa
gaaagcaaaatgaaagaggcttgtcagtccatgtcgtctgtgtacccaaaccaaacctat
cctctagaggtcctttgcagcctctatctcaaaacaaataacatggatgaggatgcagtc
agctgtttttcccgactcctggaaatggcccccaacagtggattgggtcacttaggtctc
ggtaccaaggctcttctggagggaaggtataaagaagctgttgatgacctggaaaaagga
gtaaagacagtgagctcagcaatgggatggcacagcctggctgaggctcagtttaaaata
cacagacactccgacagcgctgcttcatgctcgcaaggcctaaatgtttgtacttctgaa
gataaggagctgcgagacaaactccttcgactgaagctggaggctttagtgagaagtgaa
ggagagcaggctgccagtcaggctttggaaacattctcacagattactgaggctgaaaaa
gatctggttctgttagccctgaaaggacgtgcatacctcaacaaaggacagattgatcaa
tcactcaagctcttgtcagagccggaagtctccaacccaaacctgccccagggattggct
ctgagaggactggcgcatttagctgaaggtcagcttcagctagcagagcagagcttctta
caggctacaaagcaggccccagacagcggagagtacttcttcttccttggaaaactttat
tgggatatgggctcagagacccgtaaagaccggagtaaaactcacacatacttgttaaag
gcagcaaagttagatccacatctcggctgtgcatttcgctaccttggccattattaccgg
gaggtggcaaatgacatcgctcgtgcacaggggtgctacaggaaggctttccagttaaac
agtggcgatgccgaatctggagctgctttggtggatctcagcatggggcagggagatatg
gacagtgcactggcaatccttgagtcagtgacagagaaagccacaccgggctcagctaag
tgggcctggatgagacgaggcctgtactacctgaagatcggagaacaccaacaagccaca
gcggacttgcaggctgctttgagggcagatcctgaggactgggtttgttgggaatgttta
ggtgaggcctacctcaaccgacggagcttcacagcagctctgaaagccttcggcaaagca
catcagctccagcccagctccatctacagtgtctaccaggcagctgccatcaaacagact
ctgggaaagttcaaggaggccgtggatgagtatttgcaaatcacaacacagcaggactat
gttcctgctctgaaaggccttggggagtgtcagttgtctttggcaaagagtttaatggag
gactgcagagatggaggcgccattgacctcattcaacaatccatacacaacctctttaga
gctgtgcagctgcgaccagacctgtcttgtttgtggaagctgctgggagatgcgtgcacc
gctgtcagagttgtttcgccaagcagggctcaggttgtggtgccaaccttgctgtctgga
tttgactccagcacacaggatcacatgttgaaccaagctcagactctcaaagctggcgag
aggtgttatgcccatgctttgaagctgatgcctgaggttgccagcctttggtatgacttg
ggactaaattattaccaccaggccacaaactcaccctgctctacagatgaacaccaaaac
tctttgaacctagagaaggcacaacagtgcttgaaaaaagctatcaagatggacagtggg
aactacagctactggaatgccttgggggtgatttccatgtctagaggtctggagagctat
gctttggctcagcattgcttcatcaagtccatagaagttgagccaaacaatgttgtcgca
tggacgaaccttggtacgctgtatttaaaaaaggacaacatagagcttgcacatgaagcc
ttcaaaattgcacagtctttggagccactgtatgtcaagtgctggattggacaggcgctg
atcgcagaacgcgtgggaagctacgacactatggatcttttcaggcacaccactgaactc
agcacacatatggaaggagtcaaaggttacgcctactgggtttgttccacgctgctggat
aagagcaacagggacagtgacctgtatcgctacaacattgtgcaaatgaatgccatctca
gctgctcatgtagcactctgcaagtacacagaacgaatccagtctgacccagatgccttt
attatgctgggttaccttaacgaacatctgcaactgaagaggcaggccttacaagcatat
caaagagctgttgaacttcttcagtcctcgtcctcttcagaagtgttggtcttctcactt
ggcagctgtgctcgtgctttatgcaactcgggccagtgggacgaagcagtccaggtttat
aagtccactccgctgcaggacctcagtgacctggtagggctggctttggcctacttcagg
gcaggactctaccccgaaagcattagtgtgtatgagcgagccttggctgtgacctccaat
gagaaggagaaggcttacatacttactgctctggccctgctgcagcaccaacagggcaac
ctagactcagcaaagacgctgcttttcaaatgctcggtgttaaaggagcccatctcagag
tctctgctttgcttgtgtgcgctgggattggtgcacagtgacgccacactagctgcagct
gccctgactgagctgctaaagcaagggtctgcctcagggggggttgtagagcagcgatgt
ctgctcacctgctctttgctagcccttcagggcaactacagtgcagtgcaaagagaggct
tccagagctgtgcacagtaatcctggaaatccctccctttgggctcttctgtccagagtg
atacctcaatactaccccagaaaggctcaggggggcgcagtagctggccacattgcctgt
ctctttagtatgactcaagggaagagggcgctgttgttcagcggcgtgaaccaagtggct
tgtgggagacacactggagaggatcctcacaggaatgcactgaagaccatgcagaaagct
gtcctgctctgccctgatgatccagcaacatgggctggattaatggcagcctgtcacact
gaaaacacctcctgttatctttctggctctgctcctcgccgacactcattggaacacact
ctgatgtctgtggtttctgagaaagtgcgtagcgtggaggagatggagcgccccctaacc
caggctctggaaggctgggtgttacagcaggctgtgtctggtctcatgcaacaaggacag
ctggagcaagcagaggctctctgcacgcaggttctcaatgtgtcccccgagcacccagca
gtgatgttgtcactgatgcaggttcagtgccagcgcctcctcatggccgatggtggtacc
gtccttacagagcaggtcttggagcagctaaacaaagtcataatgatgaaccccaccaac
cttggagcgtggcattggctggctgaggtgtaccgtagccagggcctcctggtccaggct
gtgatggcttacagacagagcctacagcttgccctgcagctgggcgcacacagcttccag
attgccagcctcctccgactggctctgctggctcttggaccctgcatggctggagttcct
ggaaatgagtggaaggatcttgttatggaagccactacggaggttttgaagctgggctct
tctcccatggccctcctcttccaggccttgctccaatatgtgaccaagatgactgcaagg
gaaacgaggcgtttgctggagaggtccgtttatgtttcatctgatgatttcccagtaacg
gtggtgcaggtggcgagttggtacctcctcagacacttgcatgccaaaaatgatcaagaa
ctccttaatgttcttctgcaacatgccaaaatgaatggaaatcaaaggttgttggatttt
tacacagaactaacatcttcctcatcatga
DBGET
integrated database retrieval system
