Xiphophorus maculatus (southern platyfish): 102237580
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Entry
102237580 CDS
T02923
Name
(RefSeq) thyroid hormone receptor alpha
KO
K05547
thyroid hormone receptor alpha
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04080
Neuroactive ligand-receptor interaction
xma04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102237580
04081 Hormone signaling
102237580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xma03000
]
102237580
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
xma03310
]
102237580
Transcription factors [BR:
xma03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
102237580
Nuclear receptors [BR:
xma03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
102237580
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
102237580
NCBI-ProteinID:
XP_005794787
Ensembl:
ENSXMAG00000017922
UniProt:
M4AU20
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Position
10:complement(14980043..15113167)
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AA seq
409 aa
AA seq
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MEHMPKEQDSNPSEGEEKQWLNGPKRKRKNSQCSVKSMTGYIPSYLEKDEPCVVCGDKAT
GYHYRCITCEGCKGFFRRTIQKNLHPTYSCKYDGCCIIDKITRNQCQLCRFKKCISVGMA
MDLVLDDSKRVAKRRLIEENREKRKKEEMVKSLQTRPEPTVAEWDLIRLVTEAHRHTNAQ
GAQWKQNRKFLPEKIGQSPVAPTSDGDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFSE
LPCEDQIILLKGCCMEIMSLRAAIRYDPESETLTLSGEIAVKREQLKNGGLGVVSDAIFD
LGKSLAQFNLDDTEVALLQAVLLMSSDRSGLTSVDKIEKCQETYLLAFEHYINYRKHNIP
HFWPKLLMKVTDLRMIGACHASRFLHMKVECPNELFPPLFLEVFEEQEV
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggaacacatgcccaaggagcaggactctaacccatcagagggagaagagaaacagtgg
ctcaatggccctaagaggaagaggaagaacagccaatgttcggtgaagagtatgactggg
tacatccccagctacctcgaaaaggatgagccatgtgtggtgtgtggcgacaaggccaca
gggtaccactaccgctgcattacctgcgagggctgcaagggtttctttcgtaggaccatt
caaaagaacctccaccccacctactcctgcaagtacgatggctgctgcatcattgacaag
atcacccgcaaccagtgccagctgtgtcgctttaagaagtgcatctcagtgggaatggcc
atggacttggtcctggatgactcaaagcgtgtggctaaacggcgccttattgaggagaac
agggagaaacgcaaaaaggaggagatggtgaagtccctgcagacccgtccagagcccact
gtggccgaatgggacctgatccggctggtgacagaggcccatcggcataccaacgctcag
ggcgcacagtggaaacagaaccgcaaattcctgccagagaagattggccaatctccggtt
gccccgacgtccgacggagacaaggtggacctggaagccttcagcgaattcaccaagatc
atcacccctgccatcaccagagtagtcgactttgccaaaaaactgcccatgttctctgag
ctgccttgtgaagaccagatcatcttgttgaagggctgctgcatggagatcatgtcgttg
cgtgcagcaatccgttatgaccccgaaagcgagacgctgacgctgagcggggagatagct
gtgaagcgtgagcagctgaagaacggagggctgggtgtggtgtctgacgccatctttgat
ttgggcaaaagcctggcgcagttcaacctggacgacacggaagtggcgcttctgcaggct
gtgcttctcatgagctcagatcgctcaggcctgacgtctgtggacaagatagagaagtgc
caggagacgtacctgctggcattcgaacactacatcaattaccgcaagcacaacattccc
cacttctggcccaaactcctgatgaaggtgacggacctgcggatgatcggtgcatgccac
gccagccgtttccttcacatgaaggtggagtgtcccaacgaactgttcccgccgcttttc
ctcgaggtcttcgaggaacaggaagtgtga
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